Detailed information NTG0263864

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: C1S74_RS27085
• Genome accession: NZ_CP025795
• Coordinates: 205729..205926 (-)
• Length: 65 a.a.
• NCBI ID: WP_308621770.1
• Uniprot ID: -
• Organism: Vibrio hyugaensis strain 090810a
• Function: dsDNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 200729..210926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1S74_RS18165	-	203315..204022 (+)	708	WP_045396568.1	1-pyrroline-5-carboxylate dehydrogenase	-
C1S74_RS18170	putP	204159..205652 (+)	1494	WP_038871553.1	sodium/proline symporter PutP	-
C1S74_RS27085	comEA	205729..205926 (-)	198	WP_308621770.1	helix-hairpin-helix domain-containing protein	Machinery gene
C1S74_RS18185	-	206752..207282 (-)	531	WP_045396574.1	GNAT family N-acetyltransferase	-
C1S74_RS18190	-	207431..207670 (+)	240	WP_045396576.1	RNA-binding protein	-
C1S74_RS18195	-	207717..207911 (-)	195	WP_052437279.1	hypothetical protein	-
C1S74_RS18200	-	207988..208350 (-)	363	WP_045396579.1	hypothetical protein	-
C1S74_RS18205	-	208527..209051 (-)	525	WP_045396581.1	GNAT family N-acetyltransferase	-
C1S74_RS26900	-	209092..209439 (-)	348	WP_231578730.1	histidine phosphatase family protein	-
C1S74_RS26905	-	209456..209662 (-)	207	WP_231578731.1	phosphoglycerate mutase family protein	-
C1S74_RS18215	-	210111..210359 (+)	249	WP_038871541.1	hypothetical protein	-
C1S74_RS18220	-	210367..210534 (-)	168	WP_005428989.1	hypothetical protein	-

Sequence

Protein

• Length: 65 a.a.
• Molecular weight: 6909.04 Da
• Isoelectric Point: 10.6913

>NTDB_id=263864 C1S74_RS27085 WP_308621770.1 205729..205926(-) (comEA) [Vibrio hyugaensis strain 090810a]
MKAVNVNRASASELAASLPGVGEKKAQAIIDYRKKNGKFKNASDLTNVPGLGDASVAKMKPYLKF

Nucleotide

• Length: 198 bp

>NTDB_id=263864 C1S74_RS27085 WP_308621770.1 205729..205926(-) (comEA) [Vibrio hyugaensis strain 090810a]
CTGAAAGCTGTGAATGTAAACAGGGCTTCTGCTTCTGAGTTAGCAGCCTCTTTGCCAGGTGTTGGCGAGAAAAAAGCACA
AGCCATCATTGACTATCGCAAGAAGAACGGGAAATTTAAAAACGCGAGTGATTTAACCAATGTGCCTGGGCTCGGTGATG
CATCTGTAGCTAAGATGAAGCCATACCTTAAGTTCTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (3-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Vibrio parahaemolyticus RIMD 2210633	58.929	86.154	0.508
comEA	Vibrio cholerae C6706	62.264	81.538	0.508
comEA	Vibrio cholerae strain A1552	62.264	81.538	0.508
comEA	Vibrio campbellii strain DS40M4	57.143	86.154	0.492
comE	Neisseria gonorrhoeae MS11	53.333	92.308	0.492
comE	Neisseria gonorrhoeae MS11	53.333	92.308	0.492
comE	Neisseria gonorrhoeae MS11	53.333	92.308	0.492
comE	Neisseria gonorrhoeae MS11	53.333	92.308	0.492
comEA/comE1	Glaesserella parasuis strain SC1401	56.364	84.615	0.477
comEA	Lactococcus lactis subsp. cremoris KW2	52.632	87.692	0.462
comEA	Acinetobacter baumannii strain A118	50	92.308	0.462
comEA/celA/cilE	Streptococcus pneumoniae D39	46.774	95.385	0.446
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	46.774	95.385	0.446
comEA/celA/cilE	Streptococcus mitis NCTC 12261	46.774	95.385	0.446
comE1/comEA	Haemophilus influenzae Rd KW20	46.774	95.385	0.446
comEA/celA/cilE	Streptococcus pneumoniae Rx1	46.774	95.385	0.446
comEA/celA/cilE	Streptococcus pneumoniae R6	46.774	95.385	0.446
comEA	Staphylococcus aureus N315	48.333	92.308	0.446
comEA	Acinetobacter baumannii D1279779	48.333	92.308	0.446
comEA	Staphylococcus aureus MW2	48.333	92.308	0.446
comEA	Acinetobacter baylyi ADP1	48.333	92.308	0.446
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.276	89.231	0.431
comEA/celA/cilE	Streptococcus mitis SK321	45.161	95.385	0.431
comEA	Bacillus subtilis subsp. subtilis str. 168	45	92.308	0.415
comEA	Legionella pneumophila strain ERS1305867	39.344	93.846	0.369
comEA	Legionella pneumophila str. Paris	39.344	93.846	0.369