Detailed information NTG0263800

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: C1S73_RS13565
• Genome accession: NZ_CP025792
• Coordinates: 2825912..2826955 (+)
• Length: 347 a.a.
• NCBI ID: WP_038870267.1
• Uniprot ID: -
• Organism: Vibrio jasicida 090810c
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2820912..2831955

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1S73_RS13550	rpoS	2821509..2822492 (+)	984	WP_038870341.1	RNA polymerase sigma factor RpoS	Regulator
C1S73_RS13555	mutS	2822582..2825143 (-)	2562	WP_038870271.1	DNA mismatch repair protein MutS	-
C1S73_RS13560	pncC	2825229..2825711 (+)	483	WP_038870269.1	nicotinamide-nucleotide amidase	-
C1S73_RS13565	recA	2825912..2826955 (+)	1044	WP_038870267.1	recombinase RecA	Machinery gene
C1S73_RS13570	recX	2827163..2827630 (+)	468	WP_038870265.1	recombination regulator RecX	-
C1S73_RS13575	alaS	2827772..2830369 (+)	2598	WP_038870264.1	alanine--tRNA ligase	-
C1S73_RS13580	-	2830573..2831760 (+)	1188	WP_038870262.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37411.85 Da
• Isoelectric Point: 5.0726

>NTDB_id=263800 C1S73_RS13565 WP_038870267.1 2825912..2826955(+) (recA) [Vibrio jasicida 090810c]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELVDLGVKHKLVEKAGAWYSYQGDKIGQGKANACNYLREHTEVAKTIDA
KLREMLLSPALPEAPEAGEKSEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=263800 C1S73_RS13565 WP_038870267.1 2825912..2826955(+) (recA) [Vibrio jasicida 090810c]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGACGTAGAAACCATCTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTGCCAATGGGCCGTATCGTAGAGGTTTACGGTCCAGAATCTTCAGGTAAAACAACGCTAACTCTAGAGCTTATTGCA
GCAGCGCAACGTGAAGGCAAAACTTGTGCATTTATCGATGCGGAGCACGCGCTAGATCCTGTATACGCGAAGAAACTAGG
TGTTGATATCGATGCTCTACTTGTTTCTCAGCCTGATACGGGTGAGCAAGCTCTTGAGATTTGTGATGCACTTGCACGTT
CTGGTGCTATCGACGTCATGGTTGTCGACTCTGTTGCGGCACTTACTCCAAAGGCTGAAATTGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTTCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTTACAGGTAACCTAAAGCAGTCTAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAGATTGGTGTGATGTTCGGTAACCCTGAAACCACTACTGGTGGTAACGCTC
TTAAATTCTACGCTTCTGTTCGTCTAGATATCCGCCGTACTGGCGCAATCAAAGAAGGCGATGAAGTTGTGGGTAACGAA
ACGCGCATTAAAGTGGTTAAAAACAAGATTGCTGCACCGTTTAAAGAAGCGAATACGCAAATCATGTATGGCCAAGGCTT
TAATCGTGAAGGTGAATTAGTCGACCTAGGCGTTAAGCACAAGCTAGTAGAAAAAGCGGGTGCATGGTACAGCTACCAAG
GCGATAAGATCGGTCAAGGTAAAGCGAACGCTTGTAACTACCTACGTGAGCACACCGAAGTGGCAAAGACTATCGATGCT
AAGCTACGTGAAATGCTACTTTCTCCTGCTTTACCTGAAGCGCCAGAAGCCGGTGAAAAATCAGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	94.225	94.813	0.893
recA	Vibrio cholerae O1 biovar El Tor strain E7946	94.225	94.813	0.893
recA	Acinetobacter baylyi ADP1	71.965	99.712	0.718
recA	Acinetobacter baumannii D1279779	74.695	94.524	0.706
recA	Pseudomonas stutzeri DSM 10701	74.006	94.236	0.697
recA	Glaesserella parasuis strain SC1401	69.939	93.948	0.657
recA	Neisseria gonorrhoeae MS11	67.485	93.948	0.634
recA	Neisseria gonorrhoeae MS11	67.485	93.948	0.634
recA	Neisseria gonorrhoeae strain FA1090	67.485	93.948	0.634
recA	Ralstonia pseudosolanacearum GMI1000	70.418	89.625	0.631
recA	Helicobacter pylori strain NCTC11637	60.588	97.983	0.594
recA	Helicobacter pylori 26695	60.294	97.983	0.591
recA	Streptococcus mitis SK321	59.012	99.135	0.585
recA	Streptococcus pneumoniae R6	61.92	93.084	0.576
recA	Streptococcus pneumoniae D39	61.92	93.084	0.576
recA	Streptococcus pneumoniae TIGR4	61.92	93.084	0.576
recA	Streptococcus pneumoniae Rx1	61.92	93.084	0.576
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	92.507	0.576
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.382	91.931	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	59.819	95.389	0.571
recA	Streptococcus mitis NCTC 12261	60.991	93.084	0.568
recA	Streptococcus pyogenes NZ131	60.615	93.66	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	95.389	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.83	91.354	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.372	93.084	0.562
recA	Streptococcus mutans UA159	60	93.66	0.562