Detailed information NTG0262405

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CU052_RS08650
• Genome accession: NZ_CP025537
• Coordinates: 1787394..1788437 (+)
• Length: 347 a.a.
• NCBI ID: WP_053050623.1
• Uniprot ID: -
• Organism: Vibrio harveyi strain 345
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1782394..1793437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CU052_RS08635 (CU052_09035)	rpoS	1782986..1783969 (+)	984	WP_005452115.1	RNA polymerase sigma factor RpoS	Regulator
CU052_RS08640 (CU052_09040)	mutS	1784063..1786624 (-)	2562	WP_101904480.1	DNA mismatch repair protein MutS	-
CU052_RS08645 (CU052_09045)	pncC	1786710..1787192 (+)	483	WP_101904481.1	nicotinamide-nucleotide amidase	-
CU052_RS08650 (CU052_09050)	recA	1787394..1788437 (+)	1044	WP_053050623.1	recombinase RecA	Machinery gene
CU052_RS08655 (CU052_09055)	recX	1788644..1789111 (+)	468	WP_101904482.1	recombination regulator RecX	-
CU052_RS08660 (CU052_09060)	alaS	1789254..1791836 (+)	2583	WP_101904483.1	alanine--tRNA ligase	-
CU052_RS08665 (CU052_09065)	-	1792039..1793226 (+)	1188	WP_005452123.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37444.87 Da
• Isoelectric Point: 4.9743

>NTDB_id=262405 CU052_RS08650 WP_053050623.1 1787394..1788437(+) (recA) [Vibrio harveyi strain 345]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYQGDKIGQGKANACNYLRENPEVGKTIDT
KLREMLLSPALPEAPESGEKSEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=262405 CU052_RS08650 WP_053050623.1 1787394..1788437(+) (recA) [Vibrio harveyi strain 345]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGACGTAGAAACCATCTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTAGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACGCTAACTCTTGAGCTGATCGCT
GCTGCGCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCAGAGCACGCGCTAGACCCTGTATATGCGAAGAAACTTGG
CGTTGATATCGACGCACTATTGGTTTCTCAGCCAGACACAGGTGAGCAAGCGCTAGAGATCTGTGACGCACTTGCACGTT
CTGGTGCTATTGACGTTATGGTGGTTGACTCTGTTGCAGCACTAACACCAAAAGCAGAAATTGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTTCAAGCACGTATGCTTTCTCAAGCGATGCGTAAGCTAACGGGTAACCTAAAGCAATCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACAACGACTGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGTCTAGATATCCGTCGTACTGGCGCAATCAAAGAAGGTGACGAAGTAGTAGGTAACGAA
ACGCGCATCAAAGTTGTTAAGAACAAGATTGCTGCACCGTTTAAAGAAGCGAACACGCAAATTATGTACGGCCAAGGTTT
CAACCGTGAAGGTGAGCTGATTGACCTAGGCGTGAAGCACAAGCTAGTTGAAAAAGCAGGTGCATGGTACAGCTACCAAG
GCGACAAGATTGGTCAAGGTAAAGCAAACGCTTGTAACTACCTACGCGAAAACCCAGAAGTCGGTAAGACTATCGATACT
AAACTGCGTGAAATGCTACTTTCACCAGCACTACCTGAAGCACCAGAATCAGGTGAAAAATCAGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.137	94.813	0.902
recA	Vibrio cholerae strain A1552	95.137	94.813	0.902
recA	Acinetobacter baylyi ADP1	72.254	99.712	0.72
recA	Pseudomonas stutzeri DSM 10701	75.535	94.236	0.712
recA	Acinetobacter baumannii D1279779	74.695	94.524	0.706
recA	Glaesserella parasuis strain SC1401	70.552	93.948	0.663
recA	Neisseria gonorrhoeae MS11	68.405	93.948	0.643
recA	Neisseria gonorrhoeae MS11	68.405	93.948	0.643
recA	Neisseria gonorrhoeae strain FA1090	68.405	93.948	0.643
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.625	0.637
recA	Helicobacter pylori strain NCTC11637	60.882	97.983	0.597
recA	Helicobacter pylori 26695	60.588	97.983	0.594
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	91.931	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.507	0.579
recA	Streptococcus pneumoniae Rx1	62.229	93.084	0.579
recA	Streptococcus pneumoniae TIGR4	62.229	93.084	0.579
recA	Streptococcus mitis SK321	62.229	93.084	0.579
recA	Streptococcus pneumoniae R6	62.229	93.084	0.579
recA	Streptococcus pneumoniae D39	62.229	93.084	0.579
recA	Streptococcus mitis NCTC 12261	61.92	93.084	0.576
recA	Latilactobacillus sakei subsp. sakei 23K	59.517	95.389	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.389	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Streptococcus mutans UA159	60.615	93.66	0.568
recA	Streptococcus pyogenes NZ131	60.615	93.66	0.568
recA	Lactococcus lactis subsp. cremoris KW2	60.372	93.084	0.562