Detailed information NTG0247334

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FORC72_RS02975
• Genome accession: NZ_CP023472
• Coordinates: 565491..566534 (+)
• Length: 347 a.a.
• NCBI ID: WP_120458586.1
• Uniprot ID: A0A7Y0SA10
• Organism: Vibrio parahaemolyticus strain FORC_072
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 560491..571534

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC72_RS02960 (FORC72_0471)	rpoS	561094..562083 (+)	990	WP_005478537.1	RNA polymerase sigma factor RpoS	Regulator
FORC72_RS02965 (FORC72_0472)	mutS	562162..564723 (-)	2562	WP_120458585.1	DNA mismatch repair protein MutS	-
FORC72_RS02970 (FORC72_0473)	pncC	564808..565290 (+)	483	WP_025505116.1	nicotinamide-nucleotide amidase	-
FORC72_RS02975 (FORC72_0474)	recA	565491..566534 (+)	1044	WP_120458586.1	recombinase RecA	Machinery gene
FORC72_RS02980 (FORC72_0475)	recX	566658..567125 (+)	468	WP_020835391.1	recombination regulator RecX	-
FORC72_RS02985 (FORC72_0476)	alaS	567268..569850 (+)	2583	WP_120458587.1	alanine--tRNA ligase	-
FORC72_RS02990 (FORC72_0477)	-	570053..571240 (+)	1188	WP_005478552.1	aspartate kinase	-
FORC72_RS02995 (FORC72_0478)	csrA	571333..571530 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37490.95 Da
• Isoelectric Point: 5.0688

>NTDB_id=247334 FORC72_RS02975 WP_120458586.1 565491..566534(+) (recA) [Vibrio parahaemolyticus strain FORC_072]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANACNYLREHPEIAKTIDT
KLREMLLSPAQPEAPAADEKPEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=247334 FORC72_RS02975 WP_120458586.1 565491..566534(+) (recA) [Vibrio parahaemolyticus strain FORC_072]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGATGTAGAAACCATTTCAACGGGTTCGCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTTGAGATTTACGGTCCAGAATCTTCAGGTAAAACAACACTAACTCTTGAACTTATTGCT
GCTGCGCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCAGAGCACGCTCTAGATCCTGTATATGCAAAGAAACTTGG
CGTTGATATCGATGCACTATTGGTTTCTCAACCAGACACTGGTGAGCAAGCTCTAGAGATTTGTGATGCATTAGCTCGCT
CTGGCGCAATTGACGTAATGGTTGTTGACTCTGTTGCTGCTCTAACACCTAAAGCTGAGATCGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTCCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTTACAGGTAACCTGAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCTGAAACGACTACTGGCGGTAACGCGC
TTAAGTTTTACGCTTCTGTTCGTTTAGATATCCGTCGTACTGGCGCAATCAAAGAAGGCGATGAAGTTGTAGGTAACGAA
ACGCGTATCAAAGTGGTTAAGAACAAGATTGCAGCACCATTTAAAGAAGCAAACACGCAAATCATGTATGGCCAAGGCTT
TAACCGTGAAGGTGAGTTGATTGACTTAGGCGTGAAGCACAAGCTAGTAGAAAAAGCGGGTGCTTGGTACAGCTACAATG
GCGATAAGATTGGTCAAGGTAAAGCAAACGCTTGTAACTACCTGCGTGAGCATCCAGAAATCGCGAAGACAATCGATACC
AAACTGCGTGAAATGCTACTTTCTCCAGCTCAACCAGAAGCACCTGCTGCCGATGAGAAGCCTGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A7Y0SA10

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	91.643	100	0.916
recA	Vibrio cholerae O1 biovar El Tor strain E7946	91.643	100	0.916
recA	Pseudomonas stutzeri DSM 10701	73.021	98.271	0.718
recA	Acinetobacter baylyi ADP1	72.595	98.847	0.718
recA	Acinetobacter baumannii D1279779	74.695	94.524	0.706
recA	Glaesserella parasuis strain SC1401	68.391	100	0.686
recA	Neisseria gonorrhoeae MS11	68.712	93.948	0.646
recA	Neisseria gonorrhoeae MS11	68.712	93.948	0.646
recA	Neisseria gonorrhoeae strain FA1090	68.712	93.948	0.646
recA	Ralstonia pseudosolanacearum GMI1000	71.383	89.625	0.64
recA	Helicobacter pylori strain NCTC11637	60.405	99.712	0.602
recA	Helicobacter pylori 26695	60.116	99.712	0.599
recA	Streptococcus pneumoniae Rx1	62.848	93.084	0.585
recA	Streptococcus pneumoniae R6	62.848	93.084	0.585
recA	Streptococcus pneumoniae D39	62.848	93.084	0.585
recA	Streptococcus pneumoniae TIGR4	62.848	93.084	0.585
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	91.931	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.507	0.579
recA	Streptococcus mitis NCTC 12261	61.92	93.084	0.576
recA	Streptococcus pyogenes NZ131	61.231	93.66	0.573
recA	Streptococcus mitis SK321	61.61	93.084	0.573
recA	Streptococcus mutans UA159	60.923	93.66	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	95.389	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.681	93.084	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	60.748	92.507	0.562