Detailed information NTG0024040

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GK_RS06930
• Genome accession: NC_006510
• Coordinates: 1315476..1316291 (+)
• Length: 271 a.a.
• NCBI ID: WP_021322290.1
• Uniprot ID: -
• Organism: Geobacillus kaustophilus HTA426
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1310476..1321291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GK_RS06915 (GK1294)	cinA	1311044..1312288 (+)	1245	WP_011230794.1	competence/damage-inducible protein A	Machinery gene
GK_RS06920 (GK1295)	-	1312466..1312753 (+)	288	Protein_1296	DNA recombination/repair protein RecA	-
GK_RS06925 (GK1296)	-	1313754..1315403 (+)	1650	WP_231847829.1	group II intron reverse transcriptase	-
GK_RS06930	recA	1315476..1316291 (+)	816	WP_021322290.1	recombinase RecA	Machinery gene
GK_RS06935 (GK1297)	rny	1316667..1318223 (+)	1557	WP_011230797.1	ribonuclease Y	-
GK_RS06940 (GK1298)	-	1318325..1319119 (+)	795	WP_011230798.1	TIGR00282 family metallophosphoesterase	-
GK_RS06945 (GK1299)	spoVS	1319248..1319508 (+)	261	WP_003251598.1	stage V sporulation protein SpoVS	-
GK_RS06950 (GK1300)	-	1319601..1320523 (+)	923	Protein_1302	dipeptidase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 29695.82 Da
• Isoelectric Point: 4.9902

>NTDB_id=24040 GK_RS06930 WP_021322290.1 1315476..1316291(+) (recA) [Geobacillus kaustophilus HTA426]
MKRGKIAPPGNAEGDYYLSLSLDPIYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEG
EMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAEQIKQGNDM
VGNKTKIKVVKNKVAPPFKTADVDIMYGEGISREGEILDMASELDIVQKSGSWYSYKDERLGQGRENAKQFLKENPHIAD
EIARAIRQHYGIDVEEGTSEPQQDGFGLLEE

Nucleotide

• Length: 816 bp

>NTDB_id=24040 GK_RS06930 WP_021322290.1 1315476..1316291(+) (recA) [Geobacillus kaustophilus HTA426]
GTGAAGCGGGGGAAAATAGCCCCTCCGGGTAATGCCGAGGGTGACTATTACCTATCGCTATCGCTCGACCCCATCTATGC
ACAAAAATTAGGGGTCAATATCGATGAATTGCTGCTTTCCCAGCCTGACACGGGCGAGCAGGCGCTCGAAATCGCGGAAG
CGCTCGTGCGAAGCGGCGCGGTCGATATTATCGTCATCGACTCGGTGGCGGCGCTTGTGCCGAAAGCGGAAATTGAAGGG
GAGATGGGCGACGCCCATGTCGGCTTGCAAGCGCGGCTTATGTCCCAGGCGCTTCGCAAGCTGTCTGGCGCCATTAACAA
ATCGAAAACGATCGCCATCTTCATCAACCAAATTCGCGAAAAAGTCGGCGTCATGTTTGGCAATCCGGAAACGACGCCGG
GCGGGCGGGCGCTCAAGTTTTACGCTTCCGTCCGCCTAGAGGTGCGCCGCGCCGAGCAAATTAAGCAAGGCAATGATATG
GTCGGCAACAAGACGAAAATTAAAGTCGTCAAAAACAAAGTTGCGCCGCCATTTAAAACGGCTGACGTCGACATTATGTA
CGGCGAAGGCATTTCCCGCGAAGGGGAAATTCTCGACATGGCGTCCGAATTGGACATCGTGCAAAAAAGCGGTTCGTGGT
ATTCGTACAAAGACGAGCGGCTTGGCCAAGGGCGGGAAAACGCGAAGCAATTTTTGAAGGAAAACCCGCACATCGCCGAT
GAGATCGCCCGCGCCATCCGCCAGCATTACGGCATCGACGTTGAAGAGGGAACGAGCGAACCGCAGCAAGACGGGTTCGG
ATTGCTTGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	87.124	85.978	0.749
recA	Latilactobacillus sakei subsp. sakei 23K	74.494	91.144	0.679
recA	Streptococcus pneumoniae D39	67.857	92.989	0.631
recA	Streptococcus pneumoniae R6	67.857	92.989	0.631
recA	Streptococcus pneumoniae Rx1	67.857	92.989	0.631
recA	Streptococcus pneumoniae TIGR4	67.857	92.989	0.631
recA	Streptococcus mitis NCTC 12261	68.548	91.513	0.627
recA	Streptococcus mitis SK321	67.742	91.513	0.62
recA	Streptococcus mutans UA159	67.886	90.775	0.616
recA	Streptococcus pyogenes NZ131	69.362	86.716	0.601
recA	Lactococcus lactis subsp. cremoris KW2	67.373	87.085	0.587
recA	Ralstonia pseudosolanacearum GMI1000	68.103	85.609	0.583
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.094	86.347	0.579
recA	Neisseria gonorrhoeae MS11	62.753	91.144	0.572
recA	Neisseria gonorrhoeae strain FA1090	62.753	91.144	0.572
recA	Neisseria gonorrhoeae MS11	62.753	91.144	0.572
recA	Vibrio cholerae strain A1552	65.789	84.133	0.554
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.789	84.133	0.554
recA	Pseudomonas stutzeri DSM 10701	65.639	83.764	0.55
recA	Acinetobacter baumannii D1279779	64.629	84.502	0.546
recA	Glaesserella parasuis strain SC1401	64.758	83.764	0.542
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.09	85.978	0.542
recA	Helicobacter pylori 26695	62.931	85.609	0.539
recA	Helicobacter pylori strain NCTC11637	62.931	85.609	0.539
recA	Acinetobacter baylyi ADP1	63.319	84.502	0.535
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.332	82.288	0.513