Detailed information NTG0228563

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CAY59_RS03585
• Genome accession: NZ_CP021145
• Coordinates: 716050..717093 (+)
• Length: 347 a.a.
• NCBI ID: WP_005425359.1
• Uniprot ID: A0A6V7HKT7
• Organism: Vibrio campbellii strain LA16-V1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 711050..722093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAY59_RS03570 (CAY59_03525)	rpoS	711645..712631 (+)	987	WP_005425361.1	RNA polymerase sigma factor RpoS	Regulator
CAY59_RS03575 (CAY59_03530)	mutS	712720..715281 (-)	2562	WP_077200202.1	DNA mismatch repair protein MutS	-
CAY59_RS03580 (CAY59_03535)	pncC	715367..715849 (+)	483	WP_045395379.1	nicotinamide-nucleotide amidase	-
CAY59_RS03585 (CAY59_03540)	recA	716050..717093 (+)	1044	WP_005425359.1	recombinase RecA	Machinery gene
CAY59_RS03590 (CAY59_03545)	recX	717300..717767 (+)	468	WP_005425358.1	recombination regulator RecX	-
CAY59_RS03595 (CAY59_03550)	alaS	717910..720492 (+)	2583	WP_086368979.1	alanine--tRNA ligase	-
CAY59_RS03600 (CAY59_03555)	-	720695..721882 (+)	1188	WP_005425356.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37428.87 Da
• Isoelectric Point: 4.9743

>NTDB_id=228563 CAY59_RS03585 WP_005425359.1 716050..717093(+) (recA) [Vibrio campbellii strain LA16-V1]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYQGDKIGQGKANACNYLRENPEIGKTIDA
KLREMLLSPALPEAPESGEKSEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=228563 CAY59_RS03585 WP_005425359.1 716050..717093(+) (recA) [Vibrio campbellii strain LA16-V1]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGACGTAGAAACCATCTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTAGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACGCTAACTCTTGAGCTGATTGCT
GCTGCACAACGTGAAGGCAAAACTTGTGCGTTTATCGACGCAGAGCATGCTCTAGATCCTGTATACGCGAAGAAACTTGG
CGTTGATATCGATGCACTATTGGTTTCTCAGCCAGACACAGGTGAGCAAGCGCTAGAAATCTGTGACGCACTTGCACGTT
CTGGTGCTATCGACGTTATGGTTGTCGACTCAGTTGCAGCACTAACACCAAAAGCAGAAATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAAGCACGTATGCTTTCTCAAGCGATGCGTAAGCTAACGGGTAACCTAAAGCAATCTAACTGTAT
GTGTATTTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACAACGACTGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGTCTAGATATCCGTCGTACTGGCGCAATCAAAGAAGGTGACGAAGTAGTAGGTAACGAA
ACACGCATCAAAGTTGTTAAGAACAAGATTGCTGCACCGTTTAAAGAAGCGAACACGCAAATCATGTACGGCCAAGGTTT
CAACCGCGAAGGCGAACTGATTGACCTAGGCGTGAAGCACAAGCTAGTTGAAAAAGCGGGTGCATGGTACAGCTACCAAG
GCGATAAGATTGGCCAAGGTAAAGCAAACGCTTGTAACTACCTACGCGAAAACCCAGAAATCGGTAAGACTATCGATGCT
AAACTGCGTGAAATGCTACTTTCACCAGCACTACCTGAAGCACCAGAATCAGGTGAAAAATCAGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A6V7HKT7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	95.441	94.813	0.905
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.441	94.813	0.905
recA	Acinetobacter baylyi ADP1	72.832	99.712	0.726
recA	Pseudomonas stutzeri DSM 10701	75.841	94.236	0.715
recA	Acinetobacter baumannii D1279779	75	94.524	0.709
recA	Glaesserella parasuis strain SC1401	70.859	93.948	0.666
recA	Neisseria gonorrhoeae MS11	69.018	93.948	0.648
recA	Neisseria gonorrhoeae MS11	69.018	93.948	0.648
recA	Neisseria gonorrhoeae strain FA1090	69.018	93.948	0.648
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.625	0.637
recA	Helicobacter pylori strain NCTC11637	60.882	97.983	0.597
recA	Helicobacter pylori 26695	60.588	97.983	0.594
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	91.931	0.585
recA	Streptococcus pneumoniae R6	62.539	93.084	0.582
recA	Streptococcus pneumoniae Rx1	62.539	93.084	0.582
recA	Streptococcus pneumoniae D39	62.539	93.084	0.582
recA	Streptococcus pneumoniae TIGR4	62.539	93.084	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.507	0.582
recA	Streptococcus mitis NCTC 12261	62.229	93.084	0.579
recA	Streptococcus mitis SK321	61.92	93.084	0.576
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.389	0.571
recA	Streptococcus mutans UA159	60.923	93.66	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.145	91.354	0.568
recA	Streptococcus pyogenes NZ131	60.615	93.66	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	59.215	95.389	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.062	93.084	0.559