Detailed information NTG0223006

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: A6J72_RS05950
• Genome accession: NZ_CP020433
• Coordinates: 1197237..1198382 (+)
• Length: 381 a.a.
• NCBI ID: WP_003077215.1
• Uniprot ID: A0A1L7MXQ4
• Organism: Streptococcus intermedius strain FDAARGOS_233
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1192237..1203382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J72_RS05920 (A6J72_05930)	-	1193279..1193788 (-)	510	WP_082311998.1	RDD family protein	-
A6J72_RS05925 (A6J72_05935)	-	1193772..1194278 (-)	507	WP_082311999.1	helix-turn-helix domain-containing protein	-
A6J72_RS05930 (A6J72_05940)	ruvA	1194448..1195041 (+)	594	WP_082312000.1	Holliday junction branch migration protein RuvA	-
A6J72_RS05935 (A6J72_05945)	-	1195051..1195605 (+)	555	WP_082312001.1	DNA-3-methyladenine glycosylase I	-
A6J72_RS10035 (A6J72_05950)	-	1195610..1195783 (+)	174	Protein_1144	CPBP family intramembrane glutamate endopeptidase	-
A6J72_RS05945 (A6J72_05955)	cinA	1195920..1197188 (+)	1269	WP_009569648.1	competence/damage-inducible protein A	Machinery gene
A6J72_RS05950 (A6J72_05960)	recA	1197237..1198382 (+)	1146	WP_003077215.1	recombinase RecA	Machinery gene
A6J72_RS05955 (A6J72_05965)	spx	1198468..1198866 (+)	399	WP_003026638.1	transcriptional regulator Spx	-
A6J72_RS05960 (A6J72_05970)	-	1199595..1200152 (+)	558	WP_082312002.1	SP0191 family lipoprotein	-
A6J72_RS05965 (A6J72_05975)	-	1200458..1200724 (+)	267	WP_009569646.1	IreB family regulatory phosphoprotein	-
A6J72_RS05970 (A6J72_05980)	ruvX	1200724..1201143 (+)	420	WP_003075276.1	Holliday junction resolvase RuvX	-
A6J72_RS05975 (A6J72_05985)	-	1201161..1201466 (+)	306	WP_003075274.1	DUF1292 domain-containing protein	-
A6J72_RS05980 (A6J72_05990)	-	1201665..1202906 (+)	1242	WP_105255936.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 41243.89 Da
• Isoelectric Point: 4.9888

>NTDB_id=223006 A6J72_RS05950 WP_003077215.1 1197237..1198382(+) (recA) [Streptococcus intermedius strain FDAARGOS_233]
MAKKQKKIDEISKKFGEERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDRKVRIHYGLIEDDAEDEKKVETSNSANKAEEVTLDLDGAIEIEE

Nucleotide

• Length: 1146 bp

>NTDB_id=223006 A6J72_RS05950 WP_003077215.1 1197237..1198382(+) (recA) [Streptococcus intermedius strain FDAARGOS_233]
ATGGCGAAAAAACAAAAAAAAATAGATGAAATTTCAAAGAAATTTGGTGAGGAACGCCAAAAAGCATTAGATAATGCACT
TAAAAATATTGAAAAGGATTTTGGTAAGGGAGCAATTATGCGCCTGGGGGAACGAGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCATTAGATATTGCACTTGGTGCAGGAGGGTATCCAAAGGGACGGATTATTGAAATTTATGGTCCA
GAGTCTTCTGGTAAGACAACGGTGGCTCTTCATGCGGTAGCGCAGGCCCAAAAAGAGGGAGGGATTGCAGCTTTTATTGA
CGCCGAACATGCTCTTGATCCAGCTTATGCGCAGGCACTTGGGGTTAATATTGATGAATTATTACTTTCTCAACCGGATT
CAGGTGAACAGGGACTTGAAATTGCTGGAAAATTGATTGATTCGGGGGCCGTAGATTTGGTGGTTATCGACTCAGTTGCA
GCTCTTGTACCGCGTGCTGAAATTGATGGCGATATAGGAGATAGTCATGTTGGTTTACAAGCACGGATGATGAGCCAAGC
GATGCGGAAGTTATCTGCATCTATCAATAAAACGAAGACGATTGCAATTTTTATTAATCAATTACGAGAAAAAGTTGGTA
TCATGTTTGGAAATCCAGAAACAACGCCGGGAGGTCGTGCCCTTAAGTTTTATGCTTCAGTTCGCTTGGATGTCCGCGGA
AACACTCAAATCAAAGGTACAGGTGATGAAAAAGACACCAATGTGGGGAAAGAAACGAAGATCAAGGTCGTGAAGAATAA
AGTTGCTCCGCCGTTTAAGGAAGCCTTCGTAGAAATCATGTATGGTGAGGGCATTTCTAAAACAGGCGAGCTCATCAAGA
TTGCTACGGATCTAGACATTATTAAAAAAGCAGGTGCGTGGTATTCTTACAATGATGAAAAGATTGGACAAGGGTCTGAA
AATGCTAAGAAATACTTGGCAGATCATCCAGAAATTTTTGATGAAATTGATCGCAAGGTTAGAATTCATTATGGTTTGAT
TGAGGATGATGCTGAAGATGAGAAAAAGGTGGAAACAAGCAACTCAGCAAACAAAGCAGAGGAAGTCACATTAGACTTGG
ATGGTGCGATTGAAATCGAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

3D structure

• AlphaFold DB: A0A1L7MXQ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mitis NCTC 12261	88.189	100	0.882
recA	Streptococcus mitis SK321	87.927	100	0.879
recA	Streptococcus pneumoniae Rx1	86.494	100	0.874
recA	Streptococcus pneumoniae TIGR4	86.494	100	0.874
recA	Streptococcus pneumoniae D39	86.494	100	0.874
recA	Streptococcus pneumoniae R6	86.494	100	0.874
recA	Streptococcus mutans UA159	85.714	100	0.866
recA	Streptococcus pyogenes NZ131	85.302	100	0.853
recA	Lactococcus lactis subsp. cremoris KW2	78.161	91.339	0.714
recA	Latilactobacillus sakei subsp. sakei 23K	68.713	89.764	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	69.909	86.352	0.604
recA	Neisseria gonorrhoeae strain FA1090	60.819	89.764	0.546
recA	Neisseria gonorrhoeae MS11	60.819	89.764	0.546
recA	Neisseria gonorrhoeae MS11	60.819	89.764	0.546
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.272	85.039	0.538
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.769	85.302	0.535
recA	Vibrio cholerae strain A1552	62.769	85.302	0.535
recA	Glaesserella parasuis strain SC1401	59.706	89.239	0.533
recA	Acinetobacter baumannii D1279779	61.846	85.302	0.528
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.094	86.352	0.528
recA	Acinetobacter baylyi ADP1	60.615	85.302	0.517
recA	Ralstonia pseudosolanacearum GMI1000	60.883	83.202	0.507
recA	Helicobacter pylori 26695	58.896	85.564	0.504
recA	Helicobacter pylori strain NCTC11637	58.896	85.564	0.504
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.006	86.877	0.504
recA	Pseudomonas stutzeri DSM 10701	58.769	85.302	0.501