Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | BK055_RS09385 | Genome accession | NZ_CP017775 |
| Coordinates | 1856801..1857844 (+) | Length | 347 a.a. |
| NCBI ID | WP_003154145.1 | Uniprot ID | Q659J5 |
| Organism | Bacillus velezensis strain 9912D | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1836656..1917040 | 1856801..1857844 | within | 0 |
Gene organization within MGE regions
Location: 1836656..1917040
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BK055_RS09300 (BK055_09300) | dapA | 1836892..1837761 (+) | 870 | WP_025649452.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| BK055_RS09305 (BK055_09305) | rnjB | 1837940..1839607 (+) | 1668 | WP_021493672.1 | ribonuclease J2 | - |
| BK055_RS09310 (BK055_09310) | - | 1839723..1840460 (+) | 738 | WP_003154162.1 | ClpP family protease | - |
| BK055_RS09315 (BK055_09315) | - | 1840457..1840666 (+) | 210 | WP_003154161.1 | YlzJ-like family protein | - |
| BK055_RS09320 (BK055_09320) | - | 1840801..1843164 (+) | 2364 | WP_063636644.1 | FtsK/SpoIIIE family DNA translocase | - |
| BK055_RS09325 (BK055_09325) | - | 1843289..1844014 (+) | 726 | WP_007409813.1 | GntR family transcriptional regulator | - |
| BK055_RS09330 (BK055_09330) | - | 1844186..1845355 (+) | 1170 | WP_087920797.1 | MFS transporter | - |
| BK055_RS09335 (BK055_09335) | - | 1845460..1845915 (+) | 456 | WP_013352309.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BK055_RS09340 (BK055_09340) | - | 1845915..1849034 (+) | 3120 | WP_071181766.1 | MMPL family transporter | - |
| BK055_RS09345 (BK055_09345) | yfmF | 1849187..1850467 (+) | 1281 | WP_013352311.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| BK055_RS09350 (BK055_09350) | yfmH | 1850464..1851750 (+) | 1287 | WP_013352312.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| BK055_RS09355 (BK055_09355) | ymfI | 1851809..1852537 (+) | 729 | WP_013352313.1 | elongation factor P 5-aminopentanone reductase | - |
| BK055_RS09360 (BK055_09360) | - | 1852613..1852870 (+) | 258 | WP_003154150.1 | DUF3243 domain-containing protein | - |
| BK055_RS09365 (BK055_09365) | - | 1852998..1853789 (+) | 792 | WP_013352314.1 | DUF3388 domain-containing protein | - |
| BK055_RS09370 (BK055_09370) | - | 1853808..1854707 (+) | 900 | WP_071181767.1 | helix-turn-helix domain-containing protein | - |
| BK055_RS09375 (BK055_09375) | pgsA | 1854781..1855362 (+) | 582 | WP_007409821.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BK055_RS09380 (BK055_09380) | cinA | 1855380..1856630 (+) | 1251 | WP_071181768.1 | competence/damage-inducible protein A | Machinery gene |
| BK055_RS09385 (BK055_09385) | recA | 1856801..1857844 (+) | 1044 | WP_003154145.1 | recombinase RecA | Machinery gene |
| BK055_RS09390 (BK055_09390) | - | 1858011..1859192 (+) | 1182 | WP_071181769.1 | serine hydrolase domain-containing protein | - |
| BK055_RS09395 (BK055_09395) | rny | 1859485..1861044 (+) | 1560 | WP_003154140.1 | ribonuclease Y | - |
| BK055_RS09400 (BK055_09400) | - | 1861105..1861899 (+) | 795 | WP_071181770.1 | TIGR00282 family metallophosphoesterase | - |
| BK055_RS09405 (BK055_09405) | spoVS | 1862099..1862359 (+) | 261 | WP_003154135.1 | stage V sporulation protein SpoVS | - |
| BK055_RS09410 (BK055_09410) | tdh | 1862616..1863662 (+) | 1047 | WP_014417804.1 | L-threonine 3-dehydrogenase | - |
| BK055_RS09415 (BK055_09415) | - | 1863675..1864853 (+) | 1179 | WP_029325912.1 | glycine C-acetyltransferase | - |
| BK055_RS09420 (BK055_09420) | miaB | 1864997..1866526 (+) | 1530 | WP_025649446.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BK055_RS09425 (BK055_09425) | - | 1866529..1866960 (+) | 432 | WP_003154113.1 | RicAFT regulatory complex protein RicA family protein | - |
| BK055_RS09430 (BK055_09430) | cotE | 1867213..1867758 (+) | 546 | WP_003154111.1 | outer spore coat protein CotE | - |
| BK055_RS09435 (BK055_09435) | mutS | 1867877..1870462 (+) | 2586 | WP_025649445.1 | DNA mismatch repair protein MutS | - |
| BK055_RS09440 (BK055_09440) | mutL | 1870478..1872355 (+) | 1878 | WP_017417802.1 | DNA mismatch repair endonuclease MutL | - |
| BK055_RS09445 (BK055_09445) | - | 1872600..1873141 (+) | 542 | Protein_1841 | tyrosine-type recombinase/integrase | - |
| BK055_RS09450 (BK055_09450) | - | 1873398..1874129 (+) | 732 | WP_025649444.1 | hypothetical protein | - |
| BK055_RS09455 (BK055_09455) | - | 1874553..1874762 (-) | 210 | WP_021493661.1 | hypothetical protein | - |
| BK055_RS21395 | - | 1875315..1875464 (+) | 150 | WP_223255065.1 | hypothetical protein | - |
| BK055_RS09460 (BK055_09460) | - | 1875448..1876125 (+) | 678 | WP_003154103.1 | MBL fold metallo-hydrolase | - |
| BK055_RS09465 (BK055_09465) | fabD | 1876440..1877308 (+) | 869 | Protein_1846 | ACP S-malonyltransferase | - |
| BK055_RS09470 (BK055_09470) | - | 1877445..1878419 (+) | 975 | WP_017417808.1 | acyltransferase domain-containing protein | - |
| BK055_RS09475 (BK055_09475) | fabD | 1878421..1880661 (+) | 2241 | WP_025649443.1 | ACP S-malonyltransferase | - |
| BK055_RS09480 (BK055_09480) | - | 1880727..1880975 (+) | 249 | WP_014417817.1 | acyl carrier protein | - |
| BK055_RS09485 (BK055_09485) | - | 1881027..1882289 (+) | 1263 | WP_017417811.1 | hydroxymethylglutaryl-CoA synthase family protein | - |
| BK055_RS09490 (BK055_09490) | - | 1882286..1883059 (+) | 774 | WP_025649442.1 | enoyl-CoA hydratase/isomerase | - |
| BK055_RS09495 (BK055_09495) | - | 1883069..1883431 (+) | 363 | Protein_1852 | enoyl-CoA hydratase-related protein | - |
| BK055_RS22645 | - | 1883382..1883546 (+) | 165 | Protein_1853 | beta-ketoacyl synthase N-terminal-like domain-containing protein | - |
| BK055_RS09500 (BK055_09500) | - | 1883506..1885716 (+) | 2211 | Protein_1854 | beta-ketoacyl synthase N-terminal-like domain-containing protein | - |
| BK055_RS09510 (BK055_09510) | - | 1885813..1886963 (+) | 1151 | WP_087614160.1 | IS3 family transposase | - |
| BK055_RS09515 (BK055_09515) | - | 1886999..1892794 (+) | 5796 | Protein_1856 | beta-ketoacyl synthase N-terminal-like domain-containing protein | - |
| BK055_RS09520 (BK055_09520) | - | 1892812..1903346 (+) | 10535 | Protein_1857 | SDR family NAD(P)-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37957.17 Da Isoelectric Point: 4.6955
>NTDB_id=202809 BK055_RS09385 WP_003154145.1 1856801..1857844(+) (recA) [Bacillus velezensis strain 9912D]
MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQEKGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
RIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGRENAKQFLKENKDIMLMIQEQ
IREYYGLDNNGVTDKAEEVQEEMELEE
MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQEKGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
RIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGRENAKQFLKENKDIMLMIQEQ
IREYYGLDNNGVTDKAEEVQEEMELEE
Nucleotide
Download Length: 1044 bp
>NTDB_id=202809 BK055_RS09385 WP_003154145.1 1856801..1857844(+) (recA) [Bacillus velezensis strain 9912D]
ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAGCAAATAGAAAAACAATTCGGCAAAGGTTCCATCATGAAGCT
CGGAGAAAAAACAGATACAAGAATTTCAACGGTGCCAAGCGGTTCCCTTGCACTTGATACCGCTCTCGGAATAGGCGGAT
ACCCGCGCGGACGGATTATTGAAGTATACGGACCTGAAAGCTCAGGTAAAACGACTGTAGCGCTTCACGCAATCGCTGAG
GTTCAGGAAAAAGGCGGACAGGCAGCATTTATTGATGCTGAGCATGCTCTTGATCCTGTTTACGCGCAAAAGCTCGGTGT
CAATATCGAAGAGCTTCTGCTTTCTCAGCCGGATACGGGAGAGCAGGCGCTAGAGATTGCTGAAGCGCTGGTGCGAAGCG
GAGCTGTTGATATCGTAGTCGTTGACTCTGTTGCGGCGCTTGTTCCAAAAGCTGAAATTGAAGGTGACATGGGTGATTCA
CACGTCGGTTTACAGGCGCGTCTCATGTCTCAGGCGCTCCGTAAGCTTTCCGGCGCCATCAATAAATCTAAAACAATCGC
AATCTTTATTAACCAGATTCGTGAAAAAGTCGGCGTTATGTTCGGAAATCCGGAGACGACACCGGGGGGCCGCGCGCTGA
AATTCTATTCTTCCGTGCGCCTTGAAGTGCGCCGTGCCGAGCAATTAAAGCAGGGCAACGACGTCATGGGGAATAAAACG
AGAATTAAAGTCGTAAAAAACAAAGTCGCTCCTCCGTTCCGTACGGCTGAAGTGGACATTATGTACGGTGAAGGAATCTC
CAAAGAAGGGGAAATCATCGACCTTGGAACTGAACTGGATATCGTCCAAAAAAGCGGTTCATGGTATTCTTATGAAGAAG
AACGCCTCGGCCAGGGCCGTGAAAACGCCAAGCAGTTCTTAAAAGAAAATAAAGACATCATGCTGATGATTCAGGAGCAA
ATCCGTGAATATTACGGTTTGGACAATAACGGTGTAACGGACAAAGCGGAAGAAGTTCAGGAAGAGATGGAATTAGAAGA
ATAA
ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAGCAAATAGAAAAACAATTCGGCAAAGGTTCCATCATGAAGCT
CGGAGAAAAAACAGATACAAGAATTTCAACGGTGCCAAGCGGTTCCCTTGCACTTGATACCGCTCTCGGAATAGGCGGAT
ACCCGCGCGGACGGATTATTGAAGTATACGGACCTGAAAGCTCAGGTAAAACGACTGTAGCGCTTCACGCAATCGCTGAG
GTTCAGGAAAAAGGCGGACAGGCAGCATTTATTGATGCTGAGCATGCTCTTGATCCTGTTTACGCGCAAAAGCTCGGTGT
CAATATCGAAGAGCTTCTGCTTTCTCAGCCGGATACGGGAGAGCAGGCGCTAGAGATTGCTGAAGCGCTGGTGCGAAGCG
GAGCTGTTGATATCGTAGTCGTTGACTCTGTTGCGGCGCTTGTTCCAAAAGCTGAAATTGAAGGTGACATGGGTGATTCA
CACGTCGGTTTACAGGCGCGTCTCATGTCTCAGGCGCTCCGTAAGCTTTCCGGCGCCATCAATAAATCTAAAACAATCGC
AATCTTTATTAACCAGATTCGTGAAAAAGTCGGCGTTATGTTCGGAAATCCGGAGACGACACCGGGGGGCCGCGCGCTGA
AATTCTATTCTTCCGTGCGCCTTGAAGTGCGCCGTGCCGAGCAATTAAAGCAGGGCAACGACGTCATGGGGAATAAAACG
AGAATTAAAGTCGTAAAAAACAAAGTCGCTCCTCCGTTCCGTACGGCTGAAGTGGACATTATGTACGGTGAAGGAATCTC
CAAAGAAGGGGAAATCATCGACCTTGGAACTGAACTGGATATCGTCCAAAAAAGCGGTTCATGGTATTCTTATGAAGAAG
AACGCCTCGGCCAGGGCCGTGAAAACGCCAAGCAGTTCTTAAAAGAAAATAAAGACATCATGCTGATGATTCAGGAGCAA
ATCCGTGAATATTACGGTTTGGACAATAACGGTGTAACGGACAAAGCGGAAGAAGTTCAGGAAGAGATGGAATTAGAAGA
ATAA
Similar proteins
Only experimentally validated proteins are listed.