Detailed information NTG0202809

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CJZ70_RS07285
• Genome accession: NZ_CP022890
• Coordinates: 1419907..1421034 (+)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_NT_02
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1414907..1426034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ70_RS07255 (CJZ70_07255)	-	1415064..1415576 (-)	513	WP_014477426.1	hypothetical protein	-
CJZ70_RS07260 (CJZ70_07260)	cdiI	1415648..1416007 (-)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
CJZ70_RS07265 (CJZ70_07265)	-	1416104..1416556 (-)	453	WP_014480333.1	SMI1/KNR4 family protein	-
CJZ70_RS07270 (CJZ70_07270)	-	1416655..1417095 (-)	441	WP_014480332.1	SMI1/KNR4 family protein	-
CJZ70_RS07275 (CJZ70_07275)	-	1417498..1417785 (-)	288	WP_014480331.1	hypothetical protein	-
CJZ70_RS21735 (CJZ70_07280)	-	1417799..1419725 (-)	1927	Protein_1433	T7SS effector LXG polymorphic toxin	-
CJZ70_RS07285 (CJZ70_07285)	rapC	1419907..1421034 (+)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
CJZ70_RS07295 (CJZ70_07295)	-	1421773..1422168 (-)	396	WP_046160622.1	VOC family protein	-
CJZ70_RS07300 (CJZ70_07300)	-	1423109..1423999 (-)	891	WP_014480326.1	LysR family transcriptional regulator	-
CJZ70_RS07305 (CJZ70_07305)	fumC	1424166..1425554 (+)	1389	WP_014480325.1	class II fumarate hydratase	-
CJZ70_RS07310 (CJZ70_07310)	-	1425773..1425912 (+)	140	Protein_1438	recombinase family protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=202809 CJZ70_RS07285 WP_014480328.1 1419907..1421034(+) (rapC) [Bacillus subtilis strain DKU_NT_02]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=202809 CJZ70_RS07285 WP_014480328.1 1419907..1421034(+) (rapC) [Bacillus subtilis strain DKU_NT_02]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397