Detailed information NTG0188143

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: VSVS05_RS01050
• Genome accession: NZ_CP016414
• Coordinates: 201094..202134 (+)
• Length: 346 a.a.
• NCBI ID: WP_005593985.1
• Uniprot ID: A0A1B1NRY3
• Organism: Vibrio scophthalmi strain VS-05
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 196094..207134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VSVS05_RS01035 (VSVS05_00211)	pilA	197018..197476 (-)	459	WP_065430953.1	pilin	Machinery gene
VSVS05_RS01040 (VSVS05_00212)	mutS	197739..200306 (-)	2568	WP_065545003.1	DNA mismatch repair protein MutS	-
VSVS05_RS01045 (VSVS05_00213)	pncC	200391..200879 (+)	489	WP_005593984.1	nicotinamide-nucleotide amidase	-
VSVS05_RS01050 (VSVS05_00214)	recA	201094..202134 (+)	1041	WP_005593985.1	recombinase RecA	Machinery gene
VSVS05_RS01055 (VSVS05_00215)	alaS	202495..205077 (+)	2583	WP_005593987.1	alanine--tRNA ligase	-
VSVS05_RS01060 (VSVS05_00216)	-	205229..206419 (+)	1191	WP_065545004.1	aspartate kinase	-
VSVS05_RS01065 (VSVS05_00217)	csrA	206496..206693 (+)	198	WP_005593989.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37355.80 Da
• Isoelectric Point: 4.9594

>NTDB_id=188143 VSVS05_RS01050 WP_005593985.1 201094..202134(+) (recA) [Vibrio scophthalmi strain VS-05]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRVGKTCAFIDAEHALDPIYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGQGFNREGELVDLGVKHKLIEKAGAWYSYNGDKIGQGKANACKYLKENTEAAQTIDS
KLREMLLTPAQPEEPEVGEMPQEEEF

Nucleotide

• Length: 1041 bp

>NTDB_id=188143 VSVS05_RS01050 WP_005593985.1 201094..202134(+) (recA) [Vibrio scophthalmi strain VS-05]
ATGGACGAGAACAAACAGAAGGCGCTCGCCGCTGCGCTAGGTCAGATTGAAAAGCAATTTGGTAAAGGCTCAATCATGCG
CCTTGGTGATAACCGTACAATGGATGTTGAAACTATCTCTACTGGTTCACTTTCTCTAGATATCGCATTGGGTGCTGGTG
GCTTACCAATGGGTCGTATCGTTGAAGTTTACGGTCCAGAATCTTCAGGTAAGACGACGTTAACACTAGAACTGATTGCG
GCTGCGCAACGTGTAGGTAAAACCTGTGCGTTTATTGATGCTGAGCACGCACTTGATCCTATCTATGCGAAGAAGCTAGG
TGTTGATATCGATGCTCTGTTAGTTTCTCAGCCTGATACGGGTGAGCAAGCGCTAGAAATCTGTGATGCACTTGCACGTT
CAGGTGCGATTGATGTGTTGGTTGTCGATTCAGTAGCAGCTCTAACACCAAAAGCAGAAATCGAAGGTGAGATGGGCGAC
AGCCACATGGGTCTGCAAGCTCGTATGCTTTCCCAAGCGATGCGCAAGCTAACCGGTAACCTTAAGCAGTCAAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACAACCGGTGGTAACGCGC
TGAAATTCTACGCTTCTGTTCGTCTTGATATCCGTCGTACGGGTTCGATCAAAGATGGTGACGAAGTGGTGGGTAACGAA
ACACGCATTAAAGTGGTTAAGAACAAGATCGCAGCACCATTTAAACAAGCTGAAACACAGATTCTTTATGGCCAAGGCTT
TAACCGTGAAGGTGAGTTGGTTGACCTAGGTGTAAAACACAAGCTGATTGAAAAAGCGGGTGCATGGTACAGCTACAATG
GTGACAAAATCGGCCAAGGTAAAGCGAACGCGTGTAAGTACCTAAAAGAGAATACTGAAGCGGCGCAAACCATCGATAGC
AAACTACGTGAAATGCTATTGACCCCAGCTCAACCAGAAGAGCCAGAAGTTGGCGAAATGCCACAAGAAGAAGAGTTCTA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A1B1NRY3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	87.252	100	0.89
recA	Vibrio cholerae O1 biovar El Tor strain E7946	87.252	100	0.89
recA	Pseudomonas stutzeri DSM 10701	72.941	98.266	0.717
recA	Acinetobacter baylyi ADP1	70.809	100	0.708
recA	Acinetobacter baumannii D1279779	74.39	94.798	0.705
recA	Neisseria gonorrhoeae MS11	67.049	100	0.676
recA	Neisseria gonorrhoeae MS11	67.049	100	0.676
recA	Neisseria gonorrhoeae strain FA1090	67.049	100	0.676
recA	Glaesserella parasuis strain SC1401	70.679	93.642	0.662
recA	Ralstonia pseudosolanacearum GMI1000	70.476	91.04	0.642
recA	Helicobacter pylori 26695	59.706	98.266	0.587
recA	Helicobacter pylori strain NCTC11637	59.412	98.266	0.584
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.009	92.197	0.581
recA	Latilactobacillus sakei subsp. sakei 23K	58.309	99.133	0.578
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	92.775	0.578
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	95.665	0.575
recA	Streptococcus mutans UA159	60.923	93.931	0.572
recA	Streptococcus pneumoniae D39	61.3	93.353	0.572
recA	Streptococcus pneumoniae Rx1	61.3	93.353	0.572
recA	Streptococcus pneumoniae R6	61.3	93.353	0.572
recA	Streptococcus pneumoniae TIGR4	61.3	93.353	0.572
recA	Streptococcus mitis NCTC 12261	60.991	93.353	0.569
recA	Streptococcus mitis SK321	60.991	93.353	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.775	0.569
recA	Streptococcus pyogenes NZ131	60.615	93.931	0.569
recA	Lactococcus lactis subsp. cremoris KW2	59.443	93.353	0.555