Detailed information NTG0167641

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AL475_RS12945
• Genome accession: NZ_CP014033
• Coordinates: 1070140..1071192 (-)
• Length: 350 a.a.
• NCBI ID: WP_104966139.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain FDAARGOS_100
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1065140..1076192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL475_RS12925 (AL475_04965)	csrA	1065158..1065355 (-)	198	WP_004415691.1	carbon storage regulator CsrA	-
AL475_RS12930 (AL475_04970)	-	1065448..1066635 (-)	1188	WP_075988936.1	aspartate kinase	-
AL475_RS12935 (AL475_04975)	alaS	1066842..1069424 (-)	2583	WP_104966138.1	alanine--tRNA ligase	-
AL475_RS12940 (AL475_04980)	recX	1069612..1070070 (-)	459	WP_044365873.1	recombination regulator RecX	-
AL475_RS12945 (AL475_04985)	recA	1070140..1071192 (-)	1053	WP_104966139.1	recombinase RecA	Machinery gene
AL475_RS12950 (AL475_04990)	pncC	1071365..1071853 (-)	489	WP_020330432.1	nicotinamide-nucleotide amidase	-
AL475_RS12955 (AL475_04995)	mutS	1071938..1074499 (+)	2562	WP_104966140.1	DNA mismatch repair protein MutS	-
AL475_RS12960 (AL475_05000)	rpoS	1074568..1075554 (-)	987	WP_020429689.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38068.53 Da
• Isoelectric Point: 4.9925

>NTDB_id=167641 AL475_RS12945 WP_104966139.1 1070140..1071192(-) (recA) [Vibrio fluvialis strain FDAARGOS_100]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIS
AAQREGKTCAFIDAEHALDPVYARRLGVKIDELLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIELGVKHKLVEKAGAWYSYNGDKIGQGKANACKYLRENSEVAKFIDS
KLREMLLNPEQVAVSEEPEFGSVPEQEEEF

Nucleotide

• Length: 1053 bp

>NTDB_id=167641 AL475_RS12945 WP_104966139.1 1070140..1071192(-) (recA) [Vibrio fluvialis strain FDAARGOS_100]
ATGGACGAGAACAAACAGAAGGCTCTGGCCGCAGCCCTGGGTCAAATTGAAAAGCAATTCGGTAAAGGTTCTATCATGCG
CTTGGGTGACAACCGCACGATGGACGTAGAAACGATTTCTACCGGTTCACTTTCTCTGGATATCGCCTTGGGTGCGGGTG
GCCTGCCAATGGGTCGTATCGTGGAAATCTACGGTCCGGAATCCTCAGGTAAAACGACGCTGACTCTGGAACTGATCTCA
GCGGCTCAGCGCGAAGGTAAAACATGTGCCTTCATCGATGCAGAGCACGCTCTGGATCCAGTTTATGCTCGTCGTCTGGG
CGTGAAAATTGATGAACTGCTGGTGTCTCAGCCAGATACTGGTGAACAGGCGCTGGAAATCTGTGACGCATTGGCGCGTT
CAGGTGCTGTTGACGTTATCGTCGTTGACTCGGTTGCAGCACTGACACCAAAAGCGGAAATTGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTTCAAGCGCGTATGCTGTCTCAAGCGATGCGTAAATTGACGGGTAACCTGAAACAGTCAAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACCACTACTGGTGGTAACGCAC
TGAAATTCTACGCATCTGTTCGTCTGGATATTCGTCGTACCGGTTCTATCAAAGAAGGCGATGAAGTTGTCGGCAACGAA
ACTCGTATCAAAGTAGTGAAGAACAAGATTGCGGCACCATTTAAAGAAGCCAACACGCAAATAATGTACGGCCAAGGCTT
TAACCGTGAAGGTGAGCTGATTGAACTGGGCGTGAAGCACAAGCTGGTCGAAAAAGCAGGTGCTTGGTACAGCTACAACG
GCGACAAAATTGGTCAGGGTAAAGCAAACGCTTGTAAATACCTGAGAGAAAACTCTGAAGTGGCTAAATTCATCGACAGC
AAACTGCGTGAAATGCTGCTGAACCCTGAACAAGTTGCGGTAAGCGAAGAGCCGGAATTTGGTTCAGTGCCAGAACAAGA
AGAAGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.368	100	0.911
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.368	100	0.911
recA	Pseudomonas stutzeri DSM 10701	72.434	97.429	0.706
recA	Acinetobacter baumannii D1279779	71.304	98.571	0.703
recA	Acinetobacter baylyi ADP1	71.554	97.429	0.697
recA	Glaesserella parasuis strain SC1401	71.299	94.571	0.674
recA	Neisseria gonorrhoeae MS11	65.429	100	0.654
recA	Neisseria gonorrhoeae MS11	65.429	100	0.654
recA	Neisseria gonorrhoeae strain FA1090	65.429	100	0.654
recA	Ralstonia pseudosolanacearum GMI1000	72.026	88.857	0.64
recA	Streptococcus mitis SK321	59.829	100	0.6
recA	Streptococcus mitis NCTC 12261	59.544	100	0.597
recA	Streptococcus pneumoniae TIGR4	59.429	100	0.594
recA	Streptococcus pneumoniae Rx1	59.429	100	0.594
recA	Streptococcus pneumoniae D39	59.429	100	0.594
recA	Streptococcus pneumoniae R6	59.429	100	0.594
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60	97.143	0.583
recA	Helicobacter pylori 26695	59.706	97.143	0.58
recA	Helicobacter pylori strain NCTC11637	59.412	97.143	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	91.714	0.571
recA	Streptococcus mutans UA159	61.231	92.857	0.569
recA	Lactococcus lactis subsp. cremoris KW2	59.403	95.714	0.569
recA	Streptococcus pyogenes NZ131	60.923	92.857	0.566
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.337	94.857	0.563
recA	Latilactobacillus sakei subsp. sakei 23K	56.125	100	0.563
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	91.714	0.56