Detailed information NTG0164459

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AVM03_RS02955
• Genome accession: NZ_CP013727
• Coordinates: 618409..619452 (+)
• Length: 347 a.a.
• NCBI ID: WP_003154145.1
• Uniprot ID: Q659J5
• Organism: Bacillus amyloliquefaciens strain MBE1283
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 613409..624452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVM03_RS02925 (AVM03_02920)	ymfI	613416..614144 (+)	729	WP_014305021.1	elongation factor P 5-aminopentanone reductase	-
AVM03_RS02930 (AVM03_02925)	-	614220..614477 (+)	258	WP_003154150.1	DUF3243 domain-containing protein	-
AVM03_RS02935 (AVM03_02930)	-	614605..615396 (+)	792	WP_003154149.1	DUF3388 domain-containing protein	-
AVM03_RS02940 (AVM03_02935)	-	615415..616314 (+)	900	WP_015388222.1	helix-turn-helix domain-containing protein	-
AVM03_RS02945 (AVM03_02940)	pgsA	616389..616970 (+)	582	WP_058906023.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AVM03_RS02950 (AVM03_02945)	cinA	616988..618238 (+)	1251	WP_052585947.1	competence/damage-inducible protein A	Machinery gene
AVM03_RS02955 (AVM03_02950)	recA	618409..619452 (+)	1044	WP_003154145.1	recombinase RecA	Machinery gene
AVM03_RS02960 (AVM03_02955)	-	619622..620803 (+)	1182	WP_015388220.1	serine hydrolase domain-containing protein	-
AVM03_RS02965 (AVM03_02960)	rny	621096..622655 (+)	1560	WP_003154140.1	ribonuclease Y	-
AVM03_RS02970 (AVM03_02965)	-	622716..623510 (+)	795	WP_003154137.1	TIGR00282 family metallophosphoesterase	-
AVM03_RS02975 (AVM03_02970)	spoVS	623710..623970 (+)	261	WP_003154135.1	stage V sporulation protein SpoVS	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37957.17 Da
• Isoelectric Point: 4.6955

>NTDB_id=164459 AVM03_RS02955 WP_003154145.1 618409..619452(+) (recA) [Bacillus amyloliquefaciens strain MBE1283]
MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQEKGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
RIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGRENAKQFLKENKDIMLMIQEQ
IREYYGLDNNGVTDKAEEVQEEMELEE

Nucleotide

• Length: 1044 bp

>NTDB_id=164459 AVM03_RS02955 WP_003154145.1 618409..619452(+) (recA) [Bacillus amyloliquefaciens strain MBE1283]
ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAGCAAATAGAAAAACAATTCGGCAAAGGTTCCATCATGAAGCT
CGGAGAAAAAACGGATACAAGAATTTCAACGGTGCCAAGCGGCTCCCTTGCACTTGATACCGCTCTCGGAATAGGCGGAT
ACCCGCGCGGACGGATTATTGAAGTATACGGACCTGAAAGTTCAGGTAAAACGACTGTAGCGCTTCACGCAATCGCTGAG
GTTCAGGAAAAAGGCGGACAGGCCGCATTTATTGATGCTGAGCATGCTCTTGATCCTGTTTACGCGCAAAAGCTCGGTGT
CAATATCGAAGAGCTTCTGCTTTCTCAGCCGGATACGGGAGAGCAGGCGCTTGAGATTGCTGAAGCGCTGGTGCGAAGCG
GAGCTGTTGATATCGTAGTCGTTGACTCTGTTGCGGCGCTTGTTCCAAAAGCTGAAATTGAAGGTGACATGGGTGATTCA
CACGTCGGTTTACAGGCGCGTCTTATGTCTCAGGCGCTCCGTAAGCTTTCCGGCGCTATCAATAAATCTAAAACAATCGC
AATCTTTATTAACCAGATTCGTGAAAAAGTCGGCGTTATGTTCGGAAATCCGGAGACGACACCGGGCGGCCGCGCGCTGA
AATTCTATTCTTCCGTGCGTCTTGAAGTGCGCCGTGCCGAGCAATTAAAACAGGGCAACGACGTGATGGGGAATAAAACG
AGAATTAAAGTCGTAAAAAACAAAGTCGCTCCTCCGTTCCGTACGGCTGAAGTGGACATTATGTACGGTGAAGGAATCTC
CAAAGAAGGGGAAATCATCGACCTTGGAACTGAACTGGATATCGTGCAAAAAAGCGGTTCGTGGTATTCTTATGAAGAAG
AACGCCTCGGTCAGGGCCGTGAAAACGCCAAGCAGTTCTTAAAAGAAAATAAAGACATCATGCTGATGATTCAGGAACAA
ATCCGTGAATATTACGGTTTAGACAATAACGGTGTAACGGACAAAGCGGAAGAAGTTCAGGAAGAGATGGAATTAGAAGA
ATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: Q659J5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	96.839	100	0.971
recA	Latilactobacillus sakei subsp. sakei 23K	74.924	94.236	0.706
recA	Streptococcus mutans UA159	66.092	100	0.663
recA	Streptococcus pneumoniae D39	68.485	95.101	0.651
recA	Streptococcus mitis NCTC 12261	68.485	95.101	0.651
recA	Streptococcus pneumoniae Rx1	68.485	95.101	0.651
recA	Streptococcus pneumoniae R6	68.485	95.101	0.651
recA	Streptococcus pneumoniae TIGR4	68.485	95.101	0.651
recA	Streptococcus mitis SK321	68.182	95.101	0.648
recA	Streptococcus pyogenes NZ131	67.378	94.524	0.637
recA	Helicobacter pylori 26695	63.265	98.847	0.625
recA	Helicobacter pylori strain NCTC11637	63.265	98.847	0.625
recA	Lactococcus lactis subsp. cremoris KW2	65.455	95.101	0.622
recA	Neisseria gonorrhoeae strain FA1090	65.443	94.236	0.617
recA	Neisseria gonorrhoeae MS11	65.443	94.236	0.617
recA	Neisseria gonorrhoeae MS11	65.443	94.236	0.617
recA	Ralstonia pseudosolanacearum GMI1000	64.329	94.524	0.608
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.609	94.236	0.599
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.609	94.236	0.599
recA	Glaesserella parasuis strain SC1401	60.29	99.424	0.599
recA	Acinetobacter baylyi ADP1	59.71	99.424	0.594
recA	Vibrio cholerae strain A1552	64.174	92.507	0.594
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.174	92.507	0.594
recA	Pseudomonas stutzeri DSM 10701	63.125	92.219	0.582
recA	Acinetobacter baumannii D1279779	62.305	92.507	0.576
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.625	92.219	0.559