Detailed information NTG0156065

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: RN86_RS03560
• Genome accession: NZ_CP012648
• Coordinates: 726255..727406 (+)
• Length: 383 a.a.
• NCBI ID: WP_046164526.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain KCOM 1506 (= ChDC B679)
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 721255..732406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RN86_RS03530 (RN86_03525)	ruvA	721829..722419 (+)	591	WP_053794300.1	Holliday junction branch migration protein RuvA	-
RN86_RS03535 (RN86_03530)	-	722416..722988 (+)	573	WP_231108794.1	hypothetical protein	-
RN86_RS03540 (RN86_03535)	-	722992..723546 (+)	555	WP_053794301.1	DNA-3-methyladenine glycosylase I	-
RN86_RS03545 (RN86_03540)	-	723551..724210 (+)	660	WP_046164529.1	type II CAAX endopeptidase family protein	-
RN86_RS03550 (RN86_03545)	-	724260..724670 (-)	411	WP_046164528.1	helix-turn-helix transcriptional regulator	-
RN86_RS03555 (RN86_03550)	cinA	724940..726196 (+)	1257	WP_053794302.1	competence/damage-inducible protein A	Machinery gene
RN86_RS03560 (RN86_03555)	recA	726255..727406 (+)	1152	WP_046164526.1	recombinase RecA	Machinery gene
RN86_RS03565 (RN86_03560)	spx	727493..727891 (+)	399	WP_046164525.1	transcriptional regulator Spx	-
RN86_RS03570 (RN86_03565)	-	728037..728609 (+)	573	WP_045773038.1	SP0191 family lipoprotein	-
RN86_RS03575 (RN86_03570)	-	728721..728987 (+)	267	WP_008809968.1	IreB family regulatory phosphoprotein	-
RN86_RS03580 (RN86_03575)	ruvX	728987..729406 (+)	420	WP_008809967.1	Holliday junction resolvase RuvX	-
RN86_RS03585 (RN86_03580)	-	729427..729738 (+)	312	WP_008809966.1	DUF1292 domain-containing protein	-
RN86_RS03590 (RN86_03585)	-	729989..731227 (+)	1239	WP_046164524.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
RN86_RS03595 (RN86_03590)	-	731335..731817 (+)	483	WP_045504636.1	SP_0198 family lipoprotein	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 41318.91 Da
• Isoelectric Point: 4.7868

>NTDB_id=156065 RN86_RS03560 WP_046164526.1 726255..727406(+) (recA) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
MAKKQKNLDDITKKFGDERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDAKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLNIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEVFDEIDRQVRVRFGLIEDDQEGEATVAETTGKITENIEEVTLELDDAIEIEE

Nucleotide

• Length: 1152 bp

>NTDB_id=156065 RN86_RS03560 WP_046164526.1 726255..727406(+) (recA) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
ATGGCAAAGAAACAAAAGAATCTAGATGATATTACAAAAAAATTCGGAGATGAGCGCCAAAAGGCTTTGGACAACGCCCT
GAAGAACATTGAAAAGGACTTCGGTAAGGGAGCGATTATGCGTCTGGGCGAGCGAGCAGAACAAAAGGTTCAAGTCATGA
GCTCAGGATCTTTGGCCTTGGATATCGCCCTTGGTGCCGGTGGTTATCCTAAGGGACGTATCATTGAAATCTACGGACCA
GAGTCTTCTGGTAAGACGACTGTTGCCCTTCATGCTGTTGCTCAAGCCCAAAAAGAGGGTGGTATTGCAGCCTTTATTGA
TGCAGAGCACGCTTTGGATCCATCTTACGCGGCTGCTCTAGGTGTCAATATTGATGAGCTGTTGCTATCTCAACCAGATT
CTGGTGAGCAAGGTTTGGAAATTGCAGGAAAATTGATTGACTCTGGTGCAGTTGATTTAGTTGTCATCGACTCCGTTGCA
GCTCTTGTACCACGTGCAGAAATCGATGGCGATATTGGAGATAGCCACGTTGGTTTGCAGGCTCGGATGATGAGTCAGGC
CATGCGTAAACTGTCTGCTTCTATCAACAAAACAAAAACAATTGCCATCTTTATCAACCAACTCCGCGAAAAAGTTGGGG
TTATGTTCGGAAATCCTGAAACAACACCAGGTGGACGAGCCCTCAAATTCTATGCTTCTGTCCGTTTGGATGTTCGTGGA
AATACTCAAATTAAAGGAACTGGTGACGCTAAGGATACAAACGTTGGTAAGGAAACCAAGATTAAGGTCGTGAAAAACAA
GGTAGCTCCGCCATTTAAAGAAGCCTTTGTGGAAATCATGTACGGAGAAGGAATTTCTAAGACTGGTGAACTGATCAAGA
TTGCAACAGACTTGAATATCATCAAAAAAGCAGGTGCTTGGTATTCTTATAATGACGAGAAGATTGGTCAAGGTTCTGAA
AATGCCAAGAAATATTTGGCAGATCACCCAGAAGTCTTTGACGAAATCGACCGTCAAGTCCGTGTCCGTTTTGGCTTGAT
TGAAGATGATCAAGAAGGGGAAGCAACTGTGGCTGAAACAACAGGGAAAATCACTGAAAACATTGAAGAAGTAACTCTTG
AACTAGACGATGCTATAGAGATTGAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mitis SK321	87.958	99.739	0.877
recA	Streptococcus mitis NCTC 12261	87.958	99.739	0.877
recA	Streptococcus pneumoniae D39	86.269	100	0.869
recA	Streptococcus pneumoniae R6	86.269	100	0.869
recA	Streptococcus pneumoniae TIGR4	86.269	100	0.869
recA	Streptococcus pneumoniae Rx1	86.269	100	0.869
recA	Streptococcus mutans UA159	84.974	100	0.856
recA	Streptococcus pyogenes NZ131	85.379	100	0.854
recA	Lactococcus lactis subsp. cremoris KW2	78.857	91.384	0.721
recA	Latilactobacillus sakei subsp. sakei 23K	65.934	95.039	0.627
recA	Bacillus subtilis subsp. subtilis str. 168	68.997	85.901	0.593
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.467	84.334	0.535
recA	Neisseria gonorrhoeae strain FA1090	61.027	86.423	0.527
recA	Neisseria gonorrhoeae MS11	61.027	86.423	0.527
recA	Neisseria gonorrhoeae MS11	61.027	86.423	0.527
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.846	84.856	0.525
recA	Vibrio cholerae strain A1552	61.846	84.856	0.525
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.542	86.684	0.525
recA	Glaesserella parasuis strain SC1401	58.702	88.512	0.52
recA	Acinetobacter baumannii D1279779	60.923	84.856	0.517
recA	Acinetobacter baylyi ADP1	60.923	84.856	0.517
recA	Ralstonia pseudosolanacearum GMI1000	58.788	86.162	0.507
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.704	86.423	0.499
recA	Helicobacter pylori strain NCTC11637	57.576	86.162	0.496
recA	Helicobacter pylori 26695	57.576	86.162	0.496
recA	Pseudomonas stutzeri DSM 10701	57.927	85.64	0.496