Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DK43_RS00675 | Genome accession | NZ_CP007573 |
| Coordinates | 133860..135005 (+) | Length | 381 a.a. |
| NCBI ID | WP_003027772.1 | Uniprot ID | A0AAI9NHA9 |
| Organism | Streptococcus anginosus strain SA1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 126673..166366 | 133860..135005 | within | 0 |
Gene organization within MGE regions
Location: 126673..166366
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK43_RS00640 (DK43_00665) | - | 126673..127821 (+) | 1149 | WP_003027782.1 | site-specific integrase | - |
| DK43_RS00645 (DK43_00670) | mutL | 127916..129862 (+) | 1947 | WP_037593386.1 | DNA mismatch repair endonuclease MutL | - |
| DK43_RS00650 (DK43_00675) | ruvA | 129996..130586 (+) | 591 | WP_003027779.1 | Holliday junction branch migration protein RuvA | - |
| DK43_RS00655 (DK43_00680) | - | 130596..131150 (+) | 555 | WP_003027778.1 | DNA-3-methyladenine glycosylase I | - |
| DK43_RS00660 (DK43_00685) | - | 131155..131813 (+) | 659 | Protein_130 | lysostaphin resistance A-like protein | - |
| DK43_RS00665 (DK43_00690) | - | 131864..132274 (-) | 411 | WP_003027775.1 | helix-turn-helix transcriptional regulator | - |
| DK43_RS00670 (DK43_00700) | cinA | 132544..133812 (+) | 1269 | WP_022525214.1 | competence/damage-inducible protein A | Machinery gene |
| DK43_RS00675 (DK43_00705) | recA | 133860..135005 (+) | 1146 | WP_003027772.1 | recombinase RecA | Machinery gene |
| DK43_RS00680 (DK43_00710) | spx | 135092..135490 (+) | 399 | WP_003027770.1 | transcriptional regulator Spx | - |
| DK43_RS00685 (DK43_00715) | - | 135574..136143 (+) | 570 | WP_003027769.1 | SP0191 family lipoprotein | - |
| DK43_RS00690 (DK43_00720) | - | 136248..136805 (+) | 558 | WP_022525213.1 | SP0191 family lipoprotein | - |
| DK43_RS00695 (DK43_00725) | - | 136928..137194 (+) | 267 | WP_009569646.1 | IreB family regulatory phosphoprotein | - |
| DK43_RS00700 (DK43_00730) | ruvX | 137194..137613 (+) | 420 | WP_003027766.1 | Holliday junction resolvase RuvX | - |
| DK43_RS00705 (DK43_00735) | - | 137631..137942 (+) | 312 | WP_003027765.1 | DUF1292 domain-containing protein | - |
| DK43_RS00710 (DK43_00740) | - | 138143..139384 (+) | 1242 | WP_003027764.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| DK43_RS00715 (DK43_00745) | - | 139433..139870 (+) | 438 | WP_003027763.1 | SP_0198 family lipoprotein | - |
| DK43_RS00720 (DK43_00750) | cls | 140264..141796 (+) | 1533 | WP_003027762.1 | cardiolipin synthase | - |
| DK43_RS10625 | - | 141860..141994 (+) | 135 | WP_003027761.1 | hypothetical protein | - |
| DK43_RS00725 (DK43_00760) | - | 142049..143590 (+) | 1542 | WP_003027759.1 | hypothetical protein | - |
| DK43_RS00730 (DK43_00765) | nrdD | 143698..145908 (+) | 2211 | WP_022525211.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| DK43_RS10395 (DK43_00770) | - | 145917..146057 (+) | 141 | WP_003027756.1 | hypothetical protein | - |
| DK43_RS00735 (DK43_00775) | - | 146117..146614 (+) | 498 | WP_003027754.1 | GNAT family N-acetyltransferase | - |
| DK43_RS00740 (DK43_00780) | - | 146624..147127 (+) | 504 | WP_003027752.1 | GNAT family N-acetyltransferase | - |
| DK43_RS00745 (DK43_00785) | nrdG | 147132..147737 (+) | 606 | WP_003027750.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| DK43_RS00750 (DK43_00790) | - | 148085..149536 (+) | 1452 | WP_022525210.1 | LCP family protein | - |
| DK43_RS00755 (DK43_00795) | cps4B | 149539..150270 (+) | 732 | WP_022525209.1 | capsular polysaccharide biosynthesis protein Cps4B | - |
| DK43_RS00760 (DK43_00800) | - | 150279..150974 (+) | 696 | WP_041331419.1 | Wzz/FepE/Etk N-terminal domain-containing protein | - |
| DK43_RS00765 (DK43_00805) | - | 150987..151682 (+) | 696 | WP_003026604.1 | tyrosine-protein kinase | - |
| DK43_RS00770 (DK43_00810) | - | 151705..153078 (+) | 1374 | WP_003027744.1 | sugar transferase | - |
| DK43_RS00775 (DK43_00815) | - | 153116..154297 (+) | 1182 | WP_022525207.1 | beta 1-4 rhamnosyltransferase Cps2T | - |
| DK43_RS00780 (DK43_00820) | - | 154294..155208 (+) | 915 | WP_003027742.1 | glycosyltransferase | - |
| DK43_RS00785 (DK43_00825) | - | 155232..156518 (+) | 1287 | WP_003027741.1 | O-antigen polymerase | - |
| DK43_RS00790 (DK43_00830) | - | 156535..157701 (+) | 1167 | WP_022525206.1 | glycosyltransferase family 4 protein | - |
| DK43_RS00795 (DK43_00835) | - | 157701..159149 (+) | 1449 | WP_003027739.1 | flippase | - |
| DK43_RS00800 (DK43_00840) | - | 159167..160177 (+) | 1011 | WP_003027738.1 | acyltransferase family protein | - |
| DK43_RS00805 (DK43_00845) | - | 160288..161244 (+) | 957 | WP_022525202.1 | capsular polysaccharide synthesis protein | - |
| DK43_RS00810 (DK43_00850) | - | 161320..162141 (+) | 822 | WP_003027736.1 | LicD family protein | - |
| DK43_RS00815 (DK43_00855) | - | 162171..162578 (+) | 408 | WP_003027735.1 | serine acetyltransferase | - |
| DK43_RS00820 (DK43_00860) | - | 163079..164311 (-) | 1233 | WP_003027733.1 | nucleotide sugar dehydrogenase | - |
| DK43_RS00825 (DK43_00865) | - | 164492..166366 (+) | 1875 | WP_022525201.1 | NTP transferase domain-containing protein | - |
Sequence
Protein
Download Length: 381 a.a. Molecular weight: 41269.88 Da Isoelectric Point: 4.9241
>NTDB_id=121188 DK43_RS00675 WP_003027772.1 133860..135005(+) (recA) [Streptococcus anginosus strain SA1]
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNSEATKSANKVEEVTLDLDDAIEIEE
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNSEATKSANKVEEVTLDLDDAIEIEE
Nucleotide
Download Length: 1146 bp
>NTDB_id=121188 DK43_RS00675 WP_003027772.1 133860..135005(+) (recA) [Streptococcus anginosus strain SA1]
ATGGCAAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGATACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAAGGAGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAGGCTCAAAAAGAAGGCGGTATCGCAGCTTTTATTGA
TGCAGAACACGCTCTTGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTCTTACTTTCTCAGCCAGACT
CTGGTGAGCAAGGTCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCA
GCCCTCGTACCACGTGCTGAGATTGATGGAGACATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGCGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCCGAAGATGAAAAAAATTCAGAAGCAACTAAATCAGCAAACAAGGTGGAGGAAGTAACGCTAGACTTGG
ATGACGCGATTGAGATTGAGGAATAA
ATGGCAAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGATACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAAGGAGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAGGCTCAAAAAGAAGGCGGTATCGCAGCTTTTATTGA
TGCAGAACACGCTCTTGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTCTTACTTTCTCAGCCAGACT
CTGGTGAGCAAGGTCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCA
GCCCTCGTACCACGTGCTGAGATTGATGGAGACATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGCGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCCGAAGATGAAAAAAATTCAGAAGCAACTAAATCAGCAAACAAGGTGGAGGAAGTAACGCTAGACTTGG
ATGACGCGATTGAGATTGAGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.