Detailed information NTG1170183

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACLV7Z_RS01680
• Genome accession: NZ_OZ217343
• Coordinates: 318290..319456 (+)
• Length: 388 a.a.
• NCBI ID: WP_023933324.1
• Uniprot ID: -
• Organism: Streptococcus mitis isolate S. mitis G22
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	316979..346370	318290..319456	within	0

Gene organization within MGE regions

Location: 316979..346370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV7Z_RS01675 (SMIG22_03270)	cinA	316979..318235 (+)	1257	WP_218774541.1	competence/damage-inducible protein A	Machinery gene
ACLV7Z_RS01680 (SMIG22_03280)	recA	318290..319456 (+)	1167	WP_023933324.1	recombinase RecA	Machinery gene
ACLV7Z_RS01685 (SMIG22_03290)	-	319572..320942 (+)	1371	WP_218774542.1	MATE family efflux transporter	-
ACLV7Z_RS01690 (SMIG22_03300)	-	321311..322261 (+)	951	WP_173212168.1	N-acetylmuramoyl-L-alanine amidase	-
ACLV7Z_RS01695 (SMIG22_03310)	-	322632..322976 (+)	345	WP_218774543.1	helix-turn-helix domain-containing protein	-
ACLV7Z_RS01700 (SMIG22_03320)	-	322989..323735 (+)	747	WP_411882185.1	ImmA/IrrE family metallo-endopeptidase	-
ACLV7Z_RS01705 (SMIG22_03330)	-	323728..324150 (+)	423	Protein_302	hypothetical protein	-
ACLV7Z_RS01710 (SMIG22_03340)	-	324874..325428 (+)	555	WP_306416194.1	PBECR4 domain-containing protein	-
ACLV7Z_RS01715 (SMIG22_03350)	-	326211..327701 (+)	1491	WP_225904910.1	YSIRK-type signal peptide-containing protein	-
ACLV7Z_RS01720 (SMIG22_03360)	-	327783..328127 (+)	345	WP_218774545.1	hypothetical protein	-
ACLV7Z_RS01725 (SMIG22_03370)	-	328155..330398 (+)	2244	WP_411882186.1	DUF1542 domain-containing protein	-
ACLV7Z_RS01730 (SMIG22_03380)	-	330710..331168 (+)	459	WP_031233612.1	DUF4231 domain-containing protein	-
ACLV7Z_RS01735 (SMIG22_03390)	-	331181..331789 (+)	609	WP_218764810.1	hypothetical protein	-
ACLV7Z_RS01740 (SMIG22_03400)	-	331782..332192 (+)	411	WP_225904911.1	hypothetical protein	-
ACLV7Z_RS01745 (SMIG22_03410)	ply	332203..333618 (+)	1416	WP_173214000.1	cholesterol-dependent cytolysin pneumolysin	-
ACLV7Z_RS01750 (SMIG22_03420)	-	334288..335004 (+)	717	WP_000532882.1	YebC/PmpR family DNA-binding transcriptional regulator	-
ACLV7Z_RS01755 (SMIG22_03430)	-	335183..335653 (+)	471	WP_218774547.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACLV7Z_RS01760 (SMIG22_03440)	rcrP	335628..337397 (+)	1770	WP_218774548.1	ABC transporter ATP-binding protein	Regulator
ACLV7Z_RS01765 (SMIG22_03450)	rcrQ	337387..339147 (+)	1761	WP_218774549.1	ABC transporter ATP-binding protein	Regulator
ACLV7Z_RS01770 (SMIG22_03460)	-	339243..339746 (+)	504	WP_218774550.1	phosphatase PAP2 family protein	-
ACLV7Z_RS01775 (SMIG22_03470)	-	339966..340412 (+)	447	WP_218774551.1	LytTR family DNA-binding domain-containing protein	-
ACLV7Z_RS01780 (SMIG22_03480)	-	340417..341091 (+)	675	WP_218774552.1	LiaF transmembrane domain-containing protein	-
ACLV7Z_RS01785 (SMIG22_03490)	-	341334..341531 (+)	198	Protein_318	N-acetylmuramoyl-L-alanine amidase family protein	-
ACLV7Z_RS01790 (SMIG22_03500)	-	341762..342061 (+)	300	WP_001815024.1	DUF4651 domain-containing protein	-
ACLV7Z_RS01795 (SMIG22_03510)	-	342058..342375 (+)	318	WP_218774554.1	thioredoxin family protein	-
ACLV7Z_RS01800 (SMIG22_03520)	ytpR	342390..343016 (+)	627	WP_218774555.1	YtpR family tRNA-binding protein	-
ACLV7Z_RS01805 (SMIG22_03530)	-	343058..343819 (+)	762	WP_218774556.1	SDR family NAD(P)-dependent oxidoreductase	-
ACLV7Z_RS01810 (SMIG22_03540)	ssbB/cilA	343897..344292 (+)	396	WP_000282442.1	single-stranded DNA-binding protein	Machinery gene
ACLV7Z_RS01815 (SMIG22_03550)	groES	344448..344732 (+)	285	WP_000917336.1	co-chaperone GroES	-
ACLV7Z_RS01820 (SMIG22_03560)	groL	344748..346370 (+)	1623	WP_218774557.1	chaperonin GroEL	-

Sequence

Protein

• Length: 388 a.a.
• Molecular weight: 41814.53 Da
• Isoelectric Point: 4.7762

>NTDB_id=1170183 ACLV7Z_RS01680 WP_023933324.1 318290..319456(+) (recA) [Streptococcus mitis isolate S. mitis G22]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEASEQDTENKKDEAVQADSVNEEVTLDLGDELEIEIEE

Nucleotide

• Length: 1167 bp

>NTDB_id=1170183 ACLV7Z_RS01680 WP_023933324.1 318290..319456(+) (recA) [Streptococcus mitis isolate S. mitis G22]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTCGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAGGGGTCAATCATGCGTTTGGGTGAACGTGCCGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTGGCTCTTGACATTGCCCTTGGTTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGACCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCGCAAGCGCAAAAAGAAGGTGGGATTGCAGCCTTTATTGA
TGCGGAGCATGCCCTTGATCCAGCTTATGCTGCGGCTCTTGGAGTCAACATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCAGGAAAATTGATTGACTCAGGTGCAGTTGACCTTGTCGTGGTCGACTCAGTTGCG
GCCCTTGTCCCTCGTGCGGAAATTGATGGCGATATCGGAGATAGCCACGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
TATGCGTAAGCTCGGTGCTTCTATCAATAAAACCAAAACAATTGCCATCTTTATCAACCAATTGCGTGAAAAAGTTGGGG
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGACGTGCTTTGAAATTCTATGCTTCAGTCCGTTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGACCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAAGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAACTCTTGAAGA
TTGCAAGCGACTTGGATATTATCAAAAAAGCAGGAGCTTGGTATTCTTATAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGCTTCAGAACAAGATACTGAAAACAAAAAAGATGAAGCAGTTCAAGCAGATTCTGTGAATGAAGAAG
TTACACTTGACCTAGGAGATGAACTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus pneumoniae Rx1	97.938	100	0.979
recA	Streptococcus pneumoniae D39	97.938	100	0.979
recA	Streptococcus pneumoniae R6	97.938	100	0.979
recA	Streptococcus pneumoniae TIGR4	97.938	100	0.979
recA	Streptococcus mitis NCTC 12261	95.361	100	0.954
recA	Streptococcus mitis SK321	94.845	100	0.948
recA	Streptococcus mutans UA159	82.857	99.227	0.822
recA	Streptococcus pyogenes NZ131	90.725	88.918	0.807
recA	Lactococcus lactis subsp. cremoris KW2	78.125	90.722	0.709
recA	Latilactobacillus sakei subsp. sakei 23K	66.479	91.495	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	68.788	85.052	0.585
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.706	83.247	0.539
recA	Glaesserella parasuis strain SC1401	60.641	88.402	0.536
recA	Vibrio cholerae strain A1552	62.848	83.247	0.523
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.848	83.247	0.523
recA	Acinetobacter baumannii D1279779	61.963	84.021	0.521
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.725	85.309	0.518
recA	Neisseria gonorrhoeae MS11	59.821	86.598	0.518
recA	Neisseria gonorrhoeae strain FA1090	59.821	86.598	0.518
recA	Neisseria gonorrhoeae MS11	59.821	86.598	0.518
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.824	87.629	0.515
recA	Acinetobacter baylyi ADP1	61.35	84.021	0.515
recA	Pseudomonas stutzeri DSM 10701	59.509	84.021	0.5
recA	Helicobacter pylori 26695	58.359	84.794	0.495
recA	Helicobacter pylori strain NCTC11637	58.359	84.794	0.495
recA	Ralstonia pseudosolanacearum GMI1000	59.937	81.701	0.49