Detailed information NTG1166326

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AB3224_RS04035
• Genome accession: NZ_OZ061585
• Coordinates: 856841..857974 (+)
• Length: 377 a.a.
• NCBI ID: WP_011667973.1
• Uniprot ID: J7LIP1
• Organism: Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2444
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 851841..862974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3224_RS04015	-	852478..853767 (+)	1290	WP_041815255.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
AB3224_RS04020	-	853881..854792 (+)	912	WP_239309669.1	helix-turn-helix domain-containing protein	-
AB3224_RS04025	pgsA	854854..855441 (+)	588	WP_011668109.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AB3224_RS04030	cinA	855497..856747 (+)	1251	WP_011667974.1	competence/damage-inducible protein A	Machinery gene
AB3224_RS04035	recA	856841..857974 (+)	1134	WP_011667973.1	recombinase RecA	Machinery gene
AB3224_RS04040	-	858057..858209 (-)	153	WP_011667972.1	hypothetical protein	-
AB3224_RS04045	rny	858537..860096 (+)	1560	WP_011667971.1	ribonuclease Y	-
AB3224_RS04050	-	860228..861022 (+)	795	WP_011667970.1	TIGR00282 family metallophosphoesterase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40320.72 Da
• Isoelectric Point: 5.3901

>NTDB_id=1166326 AB3224_RS04035 WP_011667973.1 856841..857974(+) (recA) [Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2444]
MADERQAALDKALKKIEKDFGKGSIMRLGDNSNLEVETVPSGSLALDVALGVGGYPRGRIVEIYGPESSGKTTVALHAVA
EVQKRGGTAAYIDAENALDPAYATALGVNIDDLLLSQPDTGEQGLQIADALISSGAIDIVVVDSVAALVPRAEIEGEMGD
AHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQIKDGTDVIGNR
TRIKVVKNKVAPPFKRAEVDIMYGQGISQTGELLDMAVEKDIVDKSGSWYSYGEDRIGQGRENAKQYLADHPDMMAEVNQ
RVRAAYGVGDEEAAATKATETKTDAPKDKDKGKTKAKDKPADVTPGQIELAPDKSAK

Nucleotide

• Length: 1134 bp

>NTDB_id=1166326 AB3224_RS04035 WP_011667973.1 856841..857974(+) (recA) [Levilactobacillus brevis isolate Levilactobacillus brevis CIRM-BIA2444]
ATGGCTGACGAACGACAAGCGGCGCTGGATAAAGCGCTGAAGAAGATTGAAAAAGACTTTGGTAAAGGCTCGATTATGCG
ATTAGGGGACAATAGTAACCTCGAAGTTGAGACCGTACCATCAGGCTCGTTAGCACTTGACGTTGCCTTGGGTGTCGGCG
GTTACCCTCGCGGACGGATTGTAGAAATTTATGGTCCAGAATCTTCTGGGAAGACGACCGTTGCTCTGCACGCAGTTGCC
GAGGTCCAAAAGCGTGGTGGAACAGCCGCCTATATTGATGCTGAAAATGCGTTGGATCCAGCCTATGCAACGGCATTAGG
GGTTAACATTGATGATTTATTGCTGTCGCAGCCAGATACTGGGGAACAAGGCTTGCAAATCGCTGATGCCTTGATTTCCA
GTGGTGCGATTGACATTGTCGTGGTTGATTCCGTGGCAGCCTTAGTGCCACGTGCTGAAATTGAAGGCGAAATGGGTGAT
GCTCACGTGGGTCTGCAAGCCCGGTTGATGTCACAAGCCTTACGGAAGCTATCTGGGACCATCAATAAAACGAAGACAAT
CGCGTTATTTATCAATCAGATTCGGGAAAAAGTTGGTGTGATGTTTGGTAATCCAGAGACCACACCAGGTGGCCGGGCAC
TGAAATTCTATGCGACAGTGCGGCTAGAGGTACGACGGGCCGAACAGATTAAAGATGGCACGGATGTTATCGGTAACCGG
ACGCGAATCAAGGTCGTTAAGAACAAGGTTGCGCCGCCATTTAAACGGGCCGAAGTTGATATCATGTACGGGCAAGGAAT
CTCACAAACCGGTGAATTGCTCGACATGGCGGTTGAGAAAGATATCGTTGATAAAAGCGGTTCTTGGTATTCTTATGGTG
AAGACCGAATTGGTCAAGGCCGAGAGAATGCCAAACAGTACTTGGCAGATCATCCAGATATGATGGCCGAAGTTAATCAA
CGTGTCCGGGCTGCTTACGGTGTTGGCGATGAAGAAGCCGCAGCGACTAAAGCAACTGAGACGAAGACTGATGCGCCTAA
AGACAAGGATAAAGGGAAGACAAAGGCTAAAGATAAACCGGCCGATGTTACTCCCGGTCAGATTGAGTTAGCACCAGACA
AATCAGCTAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

3D structure

• AlphaFold DB: J7LIP1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	83.908	92.308	0.775
recA	Bacillus subtilis subsp. subtilis str. 168	75.61	87.003	0.658
recA	Streptococcus pneumoniae D39	68.946	93.103	0.642
recA	Streptococcus pneumoniae R6	68.946	93.103	0.642
recA	Streptococcus pneumoniae TIGR4	68.946	93.103	0.642
recA	Streptococcus pneumoniae Rx1	68.946	93.103	0.642
recA	Streptococcus mitis SK321	70.554	90.981	0.642
recA	Streptococcus mitis NCTC 12261	70.175	90.716	0.637
recA	Streptococcus mutans UA159	66.947	94.695	0.634
recA	Streptococcus pyogenes NZ131	70.997	87.798	0.623
recA	Lactococcus lactis subsp. cremoris KW2	69.94	89.125	0.623
recA	Neisseria gonorrhoeae MS11	60.057	92.308	0.554
recA	Neisseria gonorrhoeae MS11	60.057	92.308	0.554
recA	Neisseria gonorrhoeae strain FA1090	60.057	92.308	0.554
recA	Ralstonia pseudosolanacearum GMI1000	62.918	87.268	0.549
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.424	87.533	0.546
recA	Vibrio cholerae strain A1552	62.539	85.676	0.536
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.539	85.676	0.536
recA	Pseudomonas stutzeri DSM 10701	57.971	91.512	0.531
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.162	86.737	0.531
recA	Acinetobacter baylyi ADP1	61.61	85.676	0.528
recA	Acinetobacter baumannii D1279779	60.681	85.676	0.52
recA	Glaesserella parasuis strain SC1401	60.125	85.146	0.512
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.359	87.268	0.509
recA	Helicobacter pylori 26695	56.97	87.533	0.499
recA	Helicobacter pylori strain NCTC11637	56.97	87.533	0.499