Detailed information NTG1166217

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AB3Y94_RS04065
• Genome accession: NZ_OZ061549
• Coordinates: 817672..818793 (-)
• Length: 373 a.a.
• NCBI ID: WP_367295135.1
• Uniprot ID: -
• Organism: Levilactobacillus yonginensis isolate Levilactobacillus yonginensis CIRM-BIA2544
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 812672..823793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3Y94_RS04055	-	814863..815657 (-)	795	WP_367295133.1	TIGR00282 family metallophosphoesterase	-
AB3Y94_RS04060	rny	815873..817432 (-)	1560	WP_367295134.1	ribonuclease Y	-
AB3Y94_RS04065	recA	817672..818793 (-)	1122	WP_367295135.1	recombinase RecA	Machinery gene
AB3Y94_RS04070	cinA	818885..820135 (-)	1251	WP_367295136.1	competence/damage-inducible protein A	Machinery gene
AB3Y94_RS04075	pgsA	820207..820794 (-)	588	WP_367295137.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AB3Y94_RS04080	-	820867..821811 (-)	945	WP_367295138.1	helix-turn-helix domain-containing protein	-
AB3Y94_RS04085	-	821927..823216 (-)	1290	WP_367295139.1	EF-P 5-aminopentanol modification-associated protein YfmH	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 39904.10 Da
• Isoelectric Point: 5.3683

>NTDB_id=1166217 AB3Y94_RS04065 WP_367295135.1 817672..818793(-) (recA) [Levilactobacillus yonginensis isolate Levilactobacillus yonginensis CIRM-BIA2544]
MADERQAALDKALKKIEKDFGKGSIMRLGDNANMEVETVPSGSLALDVALGVGGYPRGRIVEIYGPESSGKTTVALHAVA
EVQKQGGTAAYIDAENALDPAYATALGVNIDDLLLSQPDTGEQGLQIADALISSGAVDILVVDSVAALVPRAEIEGEMGD
AHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQIKDGTNVIGNR
TRIKVVKNKVASPFKRAEVDIMYGHGISQTGELIDMAVEKDIIDKSGSWYSYGEDRIGQGRENAKQYMADHPDMMAEVNQ
RVRAAYGVGDTADDAKDADGKSATEDKSKNTKSSKDDKGKPEQIELTPGKPGK

Nucleotide

• Length: 1122 bp

>NTDB_id=1166217 AB3Y94_RS04065 WP_367295135.1 817672..818793(-) (recA) [Levilactobacillus yonginensis isolate Levilactobacillus yonginensis CIRM-BIA2544]
ATGGCTGACGAACGACAAGCAGCGTTGGATAAGGCGCTGAAAAAAATTGAAAAAGACTTTGGTAAGGGCTCCATCATGCG
GCTAGGTGACAATGCGAACATGGAGGTTGAAACCGTGCCATCCGGCTCGTTAGCCCTTGATGTGGCTCTGGGCGTTGGGG
GATACCCCCGCGGTCGAATCGTAGAAATCTACGGTCCAGAATCATCAGGTAAGACGACGGTTGCACTTCACGCCGTTGCT
GAGGTACAGAAGCAAGGCGGGACGGCAGCTTACATTGATGCCGAAAACGCTTTGGATCCTGCCTATGCAACTGCATTAGG
GGTTAACATCGATGATCTCTTGTTATCACAACCAGATACTGGTGAACAAGGTCTGCAAATTGCAGATGCTTTGATTTCCA
GTGGTGCCGTTGATATCTTGGTTGTCGATTCCGTTGCCGCTCTGGTTCCTCGAGCTGAAATTGAAGGCGAAATGGGTGAC
GCTCACGTTGGGTTACAAGCCCGCCTGATGTCACAAGCCTTGCGAAAATTGTCTGGGTCTATCAACAAGACGAAGACGAT
TGCTTTATTTATTAACCAAATTCGTGAAAAAGTTGGGGTTATGTTCGGTAACCCTGAAACGACCCCCGGTGGTCGGGCCT
TGAAGTTCTATGCAACGGTTCGACTTGAAGTCCGCCGTGCTGAACAAATCAAGGACGGTACCAATGTCATTGGTAACCGG
ACACGAATCAAAGTTGTTAAGAACAAGGTGGCTTCGCCATTTAAGCGTGCTGAAGTTGATATTATGTATGGACACGGAAT
CTCACAAACTGGTGAATTGATTGATATGGCCGTCGAAAAGGATATCATCGACAAGAGTGGTTCTTGGTACTCTTACGGTG
AAGACCGAATTGGTCAAGGTCGTGAAAATGCCAAGCAGTACATGGCTGACCATCCGGACATGATGGCTGAAGTTAACCAG
CGTGTGCGTGCCGCATACGGTGTTGGTGACACAGCTGATGATGCCAAGGATGCGGATGGCAAGTCTGCTACTGAAGATAA
GAGTAAAAACACAAAGTCATCCAAGGATGACAAGGGTAAACCTGAACAGATTGAGTTGACTCCGGGAAAACCTGGCAAGT
AA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	85.843	89.008	0.764
recA	Bacillus subtilis subsp. subtilis str. 168	75	87.936	0.66
recA	Streptococcus pneumoniae D39	66.667	98.123	0.654
recA	Streptococcus pneumoniae R6	66.667	98.123	0.654
recA	Streptococcus pneumoniae TIGR4	66.667	98.123	0.654
recA	Streptococcus pneumoniae Rx1	66.667	98.123	0.654
recA	Streptococcus mitis SK321	69.341	93.566	0.649
recA	Streptococcus mitis NCTC 12261	68.966	93.298	0.643
recA	Streptococcus mutans UA159	65.934	97.587	0.643
recA	Streptococcus pyogenes NZ131	71.386	89.008	0.635
recA	Lactococcus lactis subsp. cremoris KW2	69.643	90.08	0.627
recA	Vibrio cholerae strain A1552	62.539	86.595	0.542
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.539	86.595	0.542
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.212	88.472	0.542
recA	Neisseria gonorrhoeae MS11	61.398	88.204	0.542
recA	Neisseria gonorrhoeae MS11	61.398	88.204	0.542
recA	Neisseria gonorrhoeae strain FA1090	61.398	88.204	0.542
recA	Ralstonia pseudosolanacearum GMI1000	63.898	83.914	0.536
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.162	87.668	0.536
recA	Pseudomonas stutzeri DSM 10701	57.514	92.761	0.534
recA	Acinetobacter baylyi ADP1	60.372	86.595	0.523
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.433	91.689	0.517
recA	Acinetobacter baumannii D1279779	59.752	86.595	0.517
recA	Glaesserella parasuis strain SC1401	59.502	86.059	0.512
recA	Helicobacter pylori 26695	56.135	87.399	0.491
recA	Helicobacter pylori strain NCTC11637	56.135	87.399	0.491