Detailed information NTG1165581

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AB3Y95_RS03440
• Genome accession: NZ_OZ061245
• Coordinates: 746566..747660 (+)
• Length: 364 a.a.
• NCBI ID: WP_367297024.1
• Uniprot ID: -
• Organism: Loigolactobacillus coryniformis isolate Loigolactobacillus coryniformis CIRM-BIA2685
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 741566..752660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3Y95_RS03420	-	742237..742965 (+)	729	WP_367297021.1	elongation factor P 5-aminopentanone reductase	-
AB3Y95_RS03425	-	743276..744229 (+)	954	WP_367297022.1	RodZ domain-containing protein	-
AB3Y95_RS03430	pgsA	744489..745076 (+)	588	WP_219481951.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AB3Y95_RS03435	cinA	745184..746431 (+)	1248	WP_367297023.1	competence/damage-inducible protein A	Machinery gene
AB3Y95_RS03440	recA	746566..747660 (+)	1095	WP_367297024.1	recombinase RecA	Machinery gene
AB3Y95_RS03445	rny	747932..749494 (+)	1563	WP_146989462.1	ribonuclease Y	-
AB3Y95_RS03450	-	749681..750754 (+)	1074	WP_186758233.1	glycosyltransferase family 4 protein	-
AB3Y95_RS03455	-	750755..751408 (-)	654	WP_367297025.1	YigZ family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 38944.29 Da
• Isoelectric Point: 5.9135

>NTDB_id=1165581 AB3Y95_RS03440 WP_367297024.1 746566..747660(+) (recA) [Loigolactobacillus coryniformis isolate Loigolactobacillus coryniformis CIRM-BIA2685]
MADERKAALDNALKKIEKNFGKGSIMRLGEKVDTQVSTVSTGSLALDEALGVGGYPRGRIIEIYGPESSGKTTVALHAVA
EVQKQGGTAAYIDAENAMDPKYASNLGVNIDDLLLSQPDTGEQGLEIADALVSSGAIDIVVVDSVAALVPRAEIEGEIGD
SHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGIMFGNPETTPGGRALKFYATVRLEVRRAEQIKEGTNIIGNR
VKIKVVKNKVAPPFKVALVDIMYGVGISQTGELVDMAVEKDIVDKSGSWYSYGNDRIGQGRENAKNYLADHPEVMAEIKQ
KVREAYGIAEPTTEDSKAGTDEKAKDKAKNKTAAKATDPSTLDV

Nucleotide

• Length: 1095 bp

>NTDB_id=1165581 AB3Y95_RS03440 WP_367297024.1 746566..747660(+) (recA) [Loigolactobacillus coryniformis isolate Loigolactobacillus coryniformis CIRM-BIA2685]
TTGGCTGATGAACGTAAAGCGGCATTAGATAATGCGCTTAAAAAGATTGAGAAGAACTTTGGTAAAGGTTCAATTATGCG
TCTTGGTGAGAAAGTCGATACGCAAGTTTCCACGGTTTCTACCGGTTCATTAGCGCTTGATGAAGCGCTAGGTGTTGGTG
GGTATCCACGTGGACGAATCATTGAAATTTATGGTCCAGAAAGTTCGGGTAAAACCACGGTTGCATTGCACGCTGTCGCT
GAAGTTCAAAAACAAGGCGGAACTGCAGCCTATATTGATGCCGAAAATGCGATGGATCCGAAGTATGCTTCTAATTTAGG
GGTCAACATCGATGATCTATTGTTATCACAACCAGATACTGGTGAACAAGGCTTAGAAATTGCTGATGCGCTAGTTTCTA
GTGGGGCTATTGATATTGTAGTTGTCGATTCTGTTGCTGCTCTAGTACCACGAGCAGAAATTGAAGGCGAAATCGGTGAT
TCCCACGTGGGCTTACAGGCACGTTTGATGTCACAAGCACTGCGGAAACTTTCTGGTTCAATTAATAAGACGAAAACTAT
CGCCATCTTTATTAACCAGATCCGTGAAAAAGTTGGGATCATGTTTGGTAATCCCGAAACAACTCCTGGTGGTCGGGCAT
TGAAATTCTACGCAACGGTGCGCCTAGAAGTACGGCGTGCTGAACAGATCAAGGAAGGTACCAATATTATTGGTAACCGT
GTTAAGATCAAAGTCGTTAAAAATAAGGTCGCACCACCATTTAAAGTTGCTTTAGTTGATATTATGTATGGTGTGGGGAT
CTCACAAACAGGTGAATTAGTTGATATGGCGGTTGAAAAAGATATCGTCGATAAAAGTGGTTCATGGTATTCTTACGGCA
ATGATCGAATCGGTCAAGGTCGTGAAAATGCCAAGAATTATTTAGCTGATCATCCAGAGGTTATGGCAGAGATCAAACAG
AAAGTTCGCGAAGCTTATGGTATTGCAGAACCAACTACTGAAGATAGCAAAGCTGGAACTGACGAAAAAGCAAAAGATAA
GGCTAAAAATAAAACTGCAGCCAAAGCTACTGATCCTAGCACATTGGATGTTTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	86.217	93.681	0.808
recA	Bacillus subtilis subsp. subtilis str. 168	75.915	90.11	0.684
recA	Streptococcus pneumoniae D39	68.539	97.802	0.67
recA	Streptococcus pneumoniae Rx1	68.539	97.802	0.67
recA	Streptococcus pneumoniae R6	68.539	97.802	0.67
recA	Streptococcus pneumoniae TIGR4	68.539	97.802	0.67
recA	Streptococcus mutans UA159	67.978	97.802	0.665
recA	Streptococcus mitis SK321	72.424	90.659	0.657
recA	Streptococcus pyogenes NZ131	71.903	90.934	0.654
recA	Streptococcus mitis NCTC 12261	71.818	90.659	0.651
recA	Lactococcus lactis subsp. cremoris KW2	71.125	90.385	0.643
recA	Neisseria gonorrhoeae MS11	60.234	93.956	0.566
recA	Neisseria gonorrhoeae strain FA1090	60.234	93.956	0.566
recA	Neisseria gonorrhoeae MS11	60.234	93.956	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.077	89.286	0.563
recA	Acinetobacter baylyi ADP1	62.654	89.011	0.558
recA	Acinetobacter baumannii D1279779	62.346	89.011	0.555
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.094	90.385	0.552
recA	Ralstonia pseudosolanacearum GMI1000	64.217	85.989	0.552
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.42	89.011	0.547
recA	Vibrio cholerae strain A1552	61.42	89.011	0.547
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.366	90.11	0.544
recA	Glaesserella parasuis strain SC1401	60.436	88.187	0.533
recA	Pseudomonas stutzeri DSM 10701	56.891	93.681	0.533
recA	Helicobacter pylori strain NCTC11637	58.896	89.56	0.527
recA	Helicobacter pylori 26695	58.896	89.56	0.527