Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | QML67_RS00490 | Genome accession | NZ_OX346401 |
| Coordinates | 95633..96688 (+) | Length | 351 a.a. |
| NCBI ID | WP_171378694.1 | Uniprot ID | - |
| Organism | Enterococcus cecorum isolate CIRMBP-1246 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 87457..133646 | 95633..96688 | within | 0 |
Gene organization within MGE regions
Location: 87457..133646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QML67_RS00455 (CIRMBP1246_00084) | - | 87715..89004 (+) | 1290 | WP_171378697.1 | pitrilysin family protein | - |
| QML67_RS00460 (CIRMBP1246_00085) | - | 89112..89837 (+) | 726 | WP_087663263.1 | ABC transporter ATP-binding protein | - |
| QML67_RS00465 (CIRMBP1246_00086) | - | 89834..90910 (+) | 1077 | WP_171332615.1 | ABC transporter permease | - |
| QML67_RS00470 (CIRMBP1246_00087) | - | 91030..91968 (+) | 939 | WP_171378696.1 | helix-turn-helix domain-containing protein | - |
| QML67_RS00475 (CIRMBP1246_00088) | pgsA | 92079..92657 (+) | 579 | WP_087213988.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| QML67_RS00480 | - | 92734..94154 (+) | 1421 | WP_281957438.1 | IS3 family transposase | - |
| QML67_RS00485 (CIRMBP1246_00091) | cinA | 94262..95509 (+) | 1248 | WP_171378695.1 | competence/damage-inducible protein A | Machinery gene |
| QML67_RS00490 (CIRMBP1246_00092) | recA | 95633..96688 (+) | 1056 | WP_171378694.1 | recombinase RecA | Machinery gene |
| QML67_RS00495 (CIRMBP1246_00093) | rny | 96907..98466 (+) | 1560 | WP_087213930.1 | ribonuclease Y | - |
| QML67_RS00500 (CIRMBP1246_00094) | - | 98683..98904 (+) | 222 | WP_016250396.1 | helix-turn-helix transcriptional regulator | - |
| QML67_RS00505 (CIRMBP1246_00095) | - | 98891..99652 (+) | 762 | WP_281957439.1 | DUF3169 family protein | - |
| QML67_RS00510 (CIRMBP1246_00096) | - | 99681..100580 (+) | 900 | WP_087213928.1 | ABC transporter ATP-binding protein | - |
| QML67_RS00515 (CIRMBP1246_00097) | - | 100573..101835 (+) | 1263 | WP_171378691.1 | ABC transporter permease | - |
| QML67_RS00520 | - | 102070..102210 (+) | 141 | WP_281957441.1 | hypothetical protein | - |
| QML67_RS00525 (CIRMBP1246_00099) | - | 102255..103094 (-) | 840 | WP_171378690.1 | Cof-type HAD-IIB family hydrolase | - |
| QML67_RS00530 (CIRMBP1246_00100) | gor | 103335..104681 (+) | 1347 | WP_281957726.1 | glutathione-disulfide reductase | - |
| QML67_RS00535 (CIRMBP1246_00101) | - | 105057..105968 (+) | 912 | WP_016250387.1 | LysR family transcriptional regulator | - |
| QML67_RS00540 (CIRMBP1246_00102) | - | 106703..108145 (+) | 1443 | WP_087213923.1 | cytochrome ubiquinol oxidase subunit I | - |
| QML67_RS00545 (CIRMBP1246_00103) | cydB | 108138..109154 (+) | 1017 | WP_168930902.1 | cytochrome d ubiquinol oxidase subunit II | - |
| QML67_RS00550 (CIRMBP1246_00104) | cydD | 109151..110872 (+) | 1722 | WP_281957442.1 | thiol reductant ABC exporter subunit CydD | - |
| QML67_RS00555 (CIRMBP1246_00105) | cydC | 110865..112619 (+) | 1755 | WP_281957443.1 | thiol reductant ABC exporter subunit CydC | - |
| QML67_RS00560 (CIRMBP1246_00106) | - | 113526..114989 (+) | 1464 | WP_087213919.1 | peptide MFS transporter | - |
| QML67_RS00565 (CIRMBP1246_00107) | - | 115216..115818 (+) | 603 | WP_087213918.1 | histidine phosphatase family protein | - |
| QML67_RS00570 (CIRMBP1246_00108) | - | 115872..117863 (-) | 1992 | WP_171378688.1 | KUP/HAK/KT family potassium transporter | - |
| QML67_RS00575 (CIRMBP1246_00109) | - | 118101..118679 (+) | 579 | WP_171301859.1 | uracil-DNA glycosylase family protein | - |
| QML67_RS00580 (CIRMBP1246_00110) | - | 118723..119448 (-) | 726 | WP_171378687.1 | DUF554 domain-containing protein | - |
| QML67_RS00585 (CIRMBP1246_00111) | glf | 119642..120745 (-) | 1104 | WP_171378686.1 | UDP-galactopyranose mutase | - |
| QML67_RS00590 (CIRMBP1246_00112) | - | 120926..121759 (+) | 834 | WP_087213905.1 | VOC family protein | - |
| QML67_RS00595 (CIRMBP1246_00113) | - | 122000..122410 (+) | 411 | WP_047333989.1 | hypothetical protein | - |
| QML67_RS00600 (CIRMBP1246_00114) | - | 122432..123859 (+) | 1428 | WP_087213904.1 | SPFH domain-containing protein | - |
| QML67_RS00605 (CIRMBP1246_00115) | - | 123862..124173 (+) | 312 | WP_047241695.1 | heavy metal-binding domain-containing protein | - |
| QML67_RS00610 (CIRMBP1246_00116) | - | 124408..124758 (+) | 351 | WP_087213903.1 | bacteriocin immunity protein | - |
| QML67_RS00615 (CIRMBP1246_00117) | - | 125088..126683 (+) | 1596 | WP_171378713.1 | alpha-glucoside-specific PTS transporter subunit IIBC | - |
| QML67_RS00620 (CIRMBP1246_00118) | - | 126711..128042 (+) | 1332 | WP_171378714.1 | 6-phospho-alpha-glucosidase | - |
| QML67_RS00625 (CIRMBP1246_00119) | - | 128110..128874 (+) | 765 | WP_281957444.1 | MurR/RpiR family transcriptional regulator | - |
| QML67_RS00630 (CIRMBP1246_00120) | - | 128880..129311 (+) | 432 | WP_171378716.1 | hypothetical protein | - |
| QML67_RS00635 (CIRMBP1246_00121) | - | 129485..129943 (+) | 459 | WP_047241691.1 | hypothetical protein | - |
| QML67_RS00640 (CIRMBP1246_00122) | - | 129957..130727 (+) | 771 | WP_171378717.1 | DUF6681 family protein | - |
| QML67_RS00645 (CIRMBP1246_00123) | - | 130770..131081 (+) | 312 | WP_171378718.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 37769.94 Da Isoelectric Point: 4.8258
>NTDB_id=1154895 QML67_RS00490 WP_171378694.1 95633..96688(+) (recA) [Enterococcus cecorum isolate CIRMBP-1246]
MADDRKTALDAALKKIEKNFGRGSIMKLGEKADQQISTVPSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIA
EVQKQGGTAAFIDAEHALDPAYAKKLGVNIDELLLSQPDTGEQGLEIADALVSSGAVDIIVIDSVAALVPRAEIDGEMGD
THVGLQARLMSQALRKLSGTINKTKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRSEQLKQGSDIVGNR
TKIKVVKNKVAPPFKVAEIDIMYGEGISQEGELLDMAVNVDLVDKSGAWYSYNGERIGQGRENVKNYMKDHPEMVSELLV
KVRDAYGIGDGSTIEVTENTGETEQETLDLE
MADDRKTALDAALKKIEKNFGRGSIMKLGEKADQQISTVPSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIA
EVQKQGGTAAFIDAEHALDPAYAKKLGVNIDELLLSQPDTGEQGLEIADALVSSGAVDIIVIDSVAALVPRAEIDGEMGD
THVGLQARLMSQALRKLSGTINKTKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRSEQLKQGSDIVGNR
TKIKVVKNKVAPPFKVAEIDIMYGEGISQEGELLDMAVNVDLVDKSGAWYSYNGERIGQGRENVKNYMKDHPEMVSELLV
KVRDAYGIGDGSTIEVTENTGETEQETLDLE
Nucleotide
Download Length: 1056 bp
>NTDB_id=1154895 QML67_RS00490 WP_171378694.1 95633..96688(+) (recA) [Enterococcus cecorum isolate CIRMBP-1246]
ATGGCCGATGATCGTAAAACAGCCTTAGATGCTGCATTGAAAAAAATAGAAAAAAACTTTGGTAGAGGCTCTATCATGAA
GCTTGGTGAAAAAGCCGACCAACAAATCTCCACCGTACCAAGTGGCTCGCTTGCATTAGATGTCGCTTTAGGCGTAGGGG
GTTATCCAAGAGGGCGGATTATTGAAGTATACGGCCCAGAAAGTTCTGGTAAGACTACGGTTGCTTTACATGCGATTGCC
GAAGTTCAAAAACAAGGCGGAACTGCAGCCTTTATCGATGCCGAACACGCTTTAGATCCAGCCTATGCCAAAAAGCTAGG
CGTGAATATTGACGAATTACTTTTATCACAGCCAGATACCGGTGAACAAGGTCTAGAGATTGCCGATGCCCTTGTTTCTA
GTGGCGCGGTCGATATTATTGTCATTGACTCAGTTGCCGCTTTAGTGCCACGTGCCGAAATCGATGGCGAAATGGGAGAC
ACACACGTTGGGTTACAAGCCCGTTTAATGTCTCAAGCCCTACGTAAATTATCTGGTACGATTAATAAAACCAAGACCAT
TGCGATTTTCATCAACCAAATCCGTGAAAAAGTCGGTGTGATGTTTGGGAATCCAGAAACCACACCTGGTGGACGTGCCT
TGAAGTTCTATGCGACCGTTCGTTTAGAAGTGCGTCGTTCTGAACAATTAAAACAAGGTAGCGATATTGTCGGTAACCGT
ACCAAGATTAAAGTCGTGAAAAATAAAGTGGCGCCACCATTTAAAGTCGCTGAAATTGACATCATGTATGGCGAAGGAAT
TTCTCAAGAAGGGGAATTGCTAGATATGGCGGTCAATGTTGATTTAGTCGATAAGAGCGGAGCATGGTACTCGTACAATG
GTGAACGAATTGGACAAGGACGCGAAAATGTCAAAAACTATATGAAAGATCACCCAGAAATGGTCAGTGAGCTTTTAGTC
AAAGTTCGTGATGCCTATGGTATTGGCGATGGTAGCACCATTGAAGTAACTGAAAATACCGGAGAAACCGAACAAGAAAC
ATTAGATTTAGAATAA
ATGGCCGATGATCGTAAAACAGCCTTAGATGCTGCATTGAAAAAAATAGAAAAAAACTTTGGTAGAGGCTCTATCATGAA
GCTTGGTGAAAAAGCCGACCAACAAATCTCCACCGTACCAAGTGGCTCGCTTGCATTAGATGTCGCTTTAGGCGTAGGGG
GTTATCCAAGAGGGCGGATTATTGAAGTATACGGCCCAGAAAGTTCTGGTAAGACTACGGTTGCTTTACATGCGATTGCC
GAAGTTCAAAAACAAGGCGGAACTGCAGCCTTTATCGATGCCGAACACGCTTTAGATCCAGCCTATGCCAAAAAGCTAGG
CGTGAATATTGACGAATTACTTTTATCACAGCCAGATACCGGTGAACAAGGTCTAGAGATTGCCGATGCCCTTGTTTCTA
GTGGCGCGGTCGATATTATTGTCATTGACTCAGTTGCCGCTTTAGTGCCACGTGCCGAAATCGATGGCGAAATGGGAGAC
ACACACGTTGGGTTACAAGCCCGTTTAATGTCTCAAGCCCTACGTAAATTATCTGGTACGATTAATAAAACCAAGACCAT
TGCGATTTTCATCAACCAAATCCGTGAAAAAGTCGGTGTGATGTTTGGGAATCCAGAAACCACACCTGGTGGACGTGCCT
TGAAGTTCTATGCGACCGTTCGTTTAGAAGTGCGTCGTTCTGAACAATTAAAACAAGGTAGCGATATTGTCGGTAACCGT
ACCAAGATTAAAGTCGTGAAAAATAAAGTGGCGCCACCATTTAAAGTCGCTGAAATTGACATCATGTATGGCGAAGGAAT
TTCTCAAGAAGGGGAATTGCTAGATATGGCGGTCAATGTTGATTTAGTCGATAAGAGCGGAGCATGGTACTCGTACAATG
GTGAACGAATTGGACAAGGACGCGAAAATGTCAAAAACTATATGAAAGATCACCCAGAAATGGTCAGTGAGCTTTTAGTC
AAAGTTCGTGATGCCTATGGTATTGGCGATGGTAGCACCATTGAAGTAACTGAAAATACCGGAGAAACCGAACAAGAAAC
ATTAGATTTAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.