Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   NBW44_RS06915 Genome accession   NZ_OW724079
Coordinates   1359657..1360808 (-) Length   383 a.a.
NCBI ID   WP_250307736.1    Uniprot ID   -
Organism   Streptococcus sp. Marseille-Q3533     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1354657..1365808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NBW44_RS06890 - 1355367..1355828 (-) 462 WP_250307732.1 MarR family winged helix-turn-helix transcriptional regulator -
  NBW44_RS06895 - 1356037..1356720 (+) 684 WP_250307733.1 hypothetical protein -
  NBW44_RS06900 - 1356765..1357481 (-) 717 WP_061863664.1 YebC/PmpR family DNA-binding transcriptional regulator -
  NBW44_RS06905 - 1357579..1358949 (-) 1371 WP_250307734.1 MATE family efflux transporter -
  NBW44_RS06910 - 1359058..1359612 (+) 555 WP_250307735.1 GNAT family N-acetyltransferase -
  NBW44_RS06915 recA 1359657..1360808 (-) 1152 WP_250307736.1 recombinase RecA Machinery gene
  NBW44_RS06920 cinA 1360862..1362118 (-) 1257 WP_250307737.1 competence/damage-inducible protein A Machinery gene
  NBW44_RS06925 - 1362249..1363289 (-) 1041 WP_250307738.1 LCP family protein -
  NBW44_RS06930 - 1363294..1363815 (-) 522 WP_075565496.1 GNAT family N-acetyltransferase -
  NBW44_RS06935 tsaE 1363805..1364248 (-) 444 WP_075565494.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  NBW44_RS06940 - 1364340..1365761 (-) 1422 WP_250307739.1 NCS2 family permease -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 40984.72 Da        Isoelectric Point: 5.2487

>NTDB_id=1152614 NBW44_RS06915 WP_250307736.1 1359657..1360808(-) (recA) [Streptococcus sp. Marseille-Q3533]
MAKKPTKKLDEIGKKFGADREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSV
AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVR
GSTQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEALVEIMYGEGISRTGELLKIASDLDIIQKAGAWYSYKGEKIGQGS
ENAKKYLADHPEIFDEIDHQVRVHFGLIEEEAGSKKAASTEKEAANQEVTLDLGDDLGIEIEE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1152614 NBW44_RS06915 WP_250307736.1 1359657..1360808(-) (recA) [Streptococcus sp. Marseille-Q3533]
ATGGCAAAAAAACCAACAAAAAAATTAGATGAAATTGGTAAAAAATTTGGTGCTGATCGTGAAAAAGCCTTGAACGATGC
CCTTAAATTGATTGAAAAAGATTTTGGTAAGGGTTCAATCATGCGTTTGGGTGAGCGTGCGGAACAAAAAGTGCAAGTGA
TGAGTTCAGGCTCTTTGGCACTTGATATTGCACTCGGTTCAGGTGGTTATCCAAAGGGGCGAATCATTGAAATCTATGGT
CCAGAATCATCAGGTAAGACAACAGTAGCCCTTCACGCTGTAGCACAAGCACAAAAAGAAGGTGGAATTGCAGCCTTTAT
CGATGCGGAACACGCTCTTGACCCAGCCTATGCAGCAGCTCTTGGGGTTAACATTGACGAATTGCTCTTGTCACAACCAG
ACTCAGGTGAGCAAGGTCTTGAAATTGCTGGGAAATTGATCGATTCAGGTGCGGTTGACCTTGTGGTTATTGACTCAGTT
GCAGCTCTTGTACCTCGTGCGGAAATCGATGGAGATATCGGAGATAGCCACGTTGGTCTTCAAGCTCGTATGATGAGCCA
AGCTATGCGTAAACTCGGTGCTTCTATCAACAAGACAAAGACAATTGCTATCTTCATCAACCAGTTGCGTGAAAAAGTAG
GGGTTATGTTTGGAAATCCAGAAACAACTCCGGGTGGACGCGCCCTTAAATTCTATGCTTCAGTCCGTTTGGATGTGCGT
GGAAGTACACAAATCAAGGGAACTGGTGATCAAAAAGATACCAACGTTGGTAAAGAAACTAAGATTAAAGTTGTGAAAAA
CAAGGTGGCTCCACCGTTCAAAGAAGCTCTTGTTGAAATCATGTATGGTGAAGGGATTTCTAGAACTGGTGAACTCTTGA
AGATTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCTTGGTACTCATACAAGGGTGAAAAAATTGGACAAGGTTCT
GAGAATGCTAAGAAATACTTGGCAGATCACCCAGAAATCTTTGATGAAATTGACCACCAAGTGCGTGTTCACTTTGGCTT
GATTGAAGAAGAAGCAGGATCTAAAAAAGCAGCATCAACTGAGAAAGAAGCTGCTAATCAAGAAGTGACACTTGATCTTG
GCGATGATCTTGGAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(22-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

93.247

100

0.937
  recA Streptococcus mitis SK321

92.727

100

0.932
  recA Streptococcus pneumoniae R6

90.488

100

0.919
  recA Streptococcus pneumoniae TIGR4

90.488

100

0.919
  recA Streptococcus pneumoniae D39

90.488

100

0.919
  recA Streptococcus pneumoniae Rx1

90.488

100

0.919
  recA Streptococcus pyogenes NZ131

85.901

100

0.859
  recA Streptococcus mutans UA159

84.856

100

0.849
  recA Lactococcus lactis subsp. cremoris KW2

78.348

91.645

0.718
  recA Latilactobacillus sakei subsp. sakei 23K

69.605

85.901

0.598
  recA Bacillus subtilis subsp. subtilis str. 168

68.788

86.162

0.593
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.158

84.334

0.533
  recA Neisseria gonorrhoeae MS11

61.212

86.162

0.527
  recA Neisseria gonorrhoeae strain FA1090

61.212

86.162

0.527
  recA Neisseria gonorrhoeae MS11

61.212

86.162

0.527
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.585

85.64

0.527
  recA Vibrio cholerae strain A1552

62.037

84.595

0.525
  recA Acinetobacter baumannii D1279779

62.037

84.595

0.525
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.037

84.595

0.525
  recA Glaesserella parasuis strain SC1401

62.229

84.334

0.525
  recA Acinetobacter baylyi ADP1

61.42

84.595

0.52
  recA Pseudomonas stutzeri DSM 10701

58.716

85.379

0.501
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.182

86.162

0.501
  recA Ralstonia pseudosolanacearum GMI1000

60.568

82.768

0.501
  recA Helicobacter pylori strain NCTC11637

57.057

86.945

0.496
  recA Helicobacter pylori 26695

57.057

86.945

0.496

Multiple sequence alignment