Detailed information NTG1152190

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: QM552_RS04405
• Genome accession: NZ_OW011623
• Coordinates: 941911..942945 (+)
• Length: 344 a.a.
• NCBI ID: WP_004259809.1
• Uniprot ID: A0A127K8X7
• Organism: Thauera humireducens strain Piv1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 936911..947945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM552_RS04375 (C4PIVTH_0906)	-	936973..937986 (+)	1014	WP_282809578.1	peptidase U32 family protein	-
QM552_RS04380 (C4PIVTH_0907)	-	938041..938952 (+)	912	WP_004259824.1	U32 family peptidase	-
QM552_RS04385 (C4PIVTH_0908)	-	939055..939600 (+)	546	WP_004259819.1	SCP2 domain-containing protein	-
QM552_RS04390 (C4PIVTH_0909)	thiL	939755..940714 (+)	960	WP_282809579.1	thiamine-phosphate kinase	-
QM552_RS04395 (C4PIVTH_0910)	-	940790..941272 (+)	483	WP_004259814.1	phosphatidylglycerophosphatase A	-
QM552_RS04400 (C4PIVTH_0911)	-	941292..941777 (+)	486	WP_004259811.1	CinA family protein	-
QM552_RS04405 (C4PIVTH_0912)	recA	941911..942945 (+)	1035	WP_004259809.1	recombinase RecA	Machinery gene
QM552_RS04410 (C4PIVTH_0913)	recX	942958..943407 (+)	450	WP_004259807.1	recombination regulator RecX	-
QM552_RS04415 (C4PIVTH_0914)	lptB	943394..944116 (+)	723	WP_004259805.1	LPS export ABC transporter ATP-binding protein	-
QM552_RS04420 (C4PIVTH_0915)	rpoN/rpoN1	944124..945584 (+)	1461	WP_004259803.1	RNA polymerase factor sigma-54	Machinery gene
QM552_RS04425 (C4PIVTH_0916)	hpf	945602..945925 (+)	324	WP_004259801.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
QM552_RS04430 (C4PIVTH_0917)	ptsN	946062..946547 (+)	486	WP_004259799.1	PTS IIA-like nitrogen regulatory protein PtsN	-
QM552_RS04435 (C4PIVTH_0918)	hprK	946516..947463 (+)	948	WP_004259797.1	HPr(Ser) kinase/phosphatase	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 36786.17 Da
• Isoelectric Point: 5.8839

>NTDB_id=1152190 QM552_RS04405 WP_004259809.1 941911..942945(+) (recA) [Thauera humireducens strain Piv1]
MDDNKAKALAAALSQIEKQFGKGSIMRMGDGNVERDIQTVSTGSLGLDIALGLGGLPRGRVVEIYGPESSGKTTLTLQVI
AEMQKLGGTAAFIDAEHALDVGYAEKLGVNIQDLLISQPDTGEQALEIADMLVRSGGVDVVVVDSVAALTPKAEIEGEMG
DQLPGLQARLMSQALRKLTANIKRTNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRMDIRRTGTIKKGDEVVGS
ETRVKVVKNKVSPPFKEAHFDILYGEGISREGEIIDLGVDHKIVDKSGAWYAYKGDKIGQGKDNSREFLRNNPALAREIE
NRVRVAVGLPEMPPATPAAAAAEA

Nucleotide

• Length: 1035 bp

>NTDB_id=1152190 QM552_RS04405 WP_004259809.1 941911..942945(+) (recA) [Thauera humireducens strain Piv1]
ATGGACGACAACAAGGCCAAGGCGCTCGCCGCTGCGCTCTCGCAGATCGAAAAGCAGTTCGGCAAGGGTTCGATCATGCG
CATGGGCGACGGCAACGTCGAACGCGACATCCAGACCGTGTCCACCGGCTCGCTCGGGCTCGACATCGCACTCGGCCTCG
GCGGCCTGCCGCGCGGTCGTGTGGTCGAGATCTACGGCCCGGAGTCATCCGGCAAGACCACGCTGACGCTGCAGGTCATC
GCCGAGATGCAGAAGCTCGGCGGCACCGCCGCGTTCATCGACGCCGAACATGCACTCGACGTCGGCTATGCCGAGAAGCT
CGGCGTCAACATCCAGGACCTGCTGATCTCCCAGCCCGACACCGGCGAACAGGCGCTCGAGATCGCCGACATGCTGGTGC
GCTCGGGCGGCGTGGACGTGGTCGTGGTCGACTCGGTCGCCGCACTGACGCCCAAGGCCGAAATCGAAGGCGAGATGGGC
GACCAGCTCCCCGGCCTGCAGGCCCGCCTGATGTCGCAGGCGCTGCGCAAGCTCACCGCCAACATCAAGCGCACCAACAC
GCTGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCGGAGACCACCACCGGCGGCAACG
CGCTCAAGTTCTACGCCTCGGTGCGCATGGACATCCGCCGCACCGGCACGATCAAGAAGGGCGACGAGGTCGTCGGGTCC
GAGACCCGCGTCAAGGTGGTGAAGAACAAGGTCTCGCCCCCGTTCAAGGAAGCGCACTTCGACATCCTGTACGGCGAGGG
CATCTCGCGCGAAGGCGAGATCATCGATCTCGGCGTCGACCACAAGATCGTCGACAAGTCCGGCGCCTGGTACGCCTACA
AGGGCGACAAGATCGGCCAGGGCAAGGACAACTCGCGCGAGTTCCTGCGCAACAACCCTGCGCTGGCGCGCGAGATCGAG
AACAGGGTCCGCGTCGCGGTCGGTCTGCCTGAAATGCCGCCGGCGACGCCCGCTGCGGCAGCCGCCGAGGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A127K8X7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	80.488	95.349	0.767
recA	Pseudomonas stutzeri DSM 10701	75.926	94.186	0.715
recA	Vibrio cholerae strain A1552	72.205	96.221	0.695
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.205	96.221	0.695
recA	Acinetobacter baylyi ADP1	72.84	94.186	0.686
recA	Neisseria gonorrhoeae MS11	71.429	95.64	0.683
recA	Neisseria gonorrhoeae MS11	71.429	95.64	0.683
recA	Neisseria gonorrhoeae strain FA1090	71.429	95.64	0.683
recA	Acinetobacter baumannii D1279779	72.531	94.186	0.683
recA	Glaesserella parasuis strain SC1401	70.807	93.605	0.663
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.768	95.349	0.637
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.465	96.802	0.634
recA	Helicobacter pylori strain NCTC11637	63.343	99.128	0.628
recA	Helicobacter pylori 26695	63.343	99.128	0.628
recA	Bacillus subtilis subsp. subtilis str. 168	64.438	95.64	0.616
recA	Latilactobacillus sakei subsp. sakei 23K	61.934	96.221	0.596
recA	Streptococcus mitis SK321	61.702	95.64	0.59
recA	Streptococcus mitis NCTC 12261	61.702	95.64	0.59
recA	Streptococcus mutans UA159	60.661	96.802	0.587
recA	Streptococcus pneumoniae R6	61.398	95.64	0.587
recA	Streptococcus pneumoniae Rx1	61.398	95.64	0.587
recA	Streptococcus pneumoniae D39	61.398	95.64	0.587
recA	Streptococcus pneumoniae TIGR4	61.398	95.64	0.587
recA	Streptococcus pyogenes NZ131	60.303	95.93	0.578
recA	Lactococcus lactis subsp. cremoris KW2	59.633	95.058	0.567
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.877	94.186	0.564