Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   N7O26_RS12040 Genome accession   NZ_OV996158
Coordinates   2642036..2643076 (-) Length   346 a.a.
NCBI ID   WP_010734076.1    Uniprot ID   A0A1L8V0B9
Organism   Enterococcus mundtii strain P2005     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2637036..2648076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7O26_RS12030 - 2639803..2639997 (-) 195 WP_130029219.1 hypothetical protein -
  N7O26_RS12035 rny 2640191..2641747 (-) 1557 WP_071866532.1 ribonuclease Y -
  N7O26_RS12040 recA 2642036..2643076 (-) 1041 WP_010734076.1 recombinase RecA Machinery gene
  N7O26_RS12045 cinA 2643182..2644426 (-) 1245 WP_071866531.1 competence/damage-inducible protein A Machinery gene
  N7O26_RS12050 pgsA 2644653..2645231 (-) 579 WP_019723896.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  N7O26_RS12055 - 2645403..2646293 (-) 891 WP_260697829.1 RodZ family helix-turn-helix domain-containing protein -
  N7O26_RS12060 yfmH 2646588..2647877 (-) 1290 WP_086335491.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 346 a.a.        Molecular weight: 37284.63 Da        Isoelectric Point: 4.8182

>NTDB_id=1152180 N7O26_RS12040 WP_010734076.1 2642036..2643076(-) (recA) [Enterococcus mundtii strain P2005]
MADDRKAALDAALKKIEKNYGKGSIMKLGEKIDQQISTIPSGSLALDVALGIGGYPRGRIIEVYGPESSGKTTVALHAIA
EVQKNGGTAAFIDAEHALDPQYAQKLGVNIDELLLSQPDTGEQGLEIADALVSSGAVDIVVIDSVAALVPRAEIDGEMGD
SHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEITPGGRALKFYATIRLEVRRAEQLKQGTDIVGNR
TKIKVVKNKVAPPFKIAEVDVMYGLGISQEGELLDMAVEKDIVDKSGAWYSYKEDRIGQGRENAKIYMSNHPEMMAEVST
LVRAAYGIGEPVDVPEEAQEELPLDE

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=1152180 N7O26_RS12040 WP_010734076.1 2642036..2643076(-) (recA) [Enterococcus mundtii strain P2005]
TTGGCAGATGATCGTAAAGCAGCCTTAGATGCTGCATTGAAAAAAATTGAAAAGAACTATGGGAAAGGTTCGATCATGAA
ACTGGGCGAAAAAATCGACCAACAAATCTCGACAATTCCAAGTGGTTCTCTTGCACTAGATGTTGCTTTAGGGATAGGTG
GCTATCCTCGTGGACGGATCATTGAAGTCTACGGTCCAGAAAGTTCAGGTAAAACAACGGTTGCACTCCATGCAATCGCA
GAAGTCCAAAAAAATGGTGGGACTGCCGCCTTTATTGATGCGGAACATGCCTTAGATCCACAATATGCCCAAAAATTAGG
GGTAAATATCGATGAATTACTCCTTTCTCAACCAGATACCGGAGAACAAGGATTAGAGATCGCTGATGCTTTAGTATCAA
GTGGTGCAGTAGATATTGTCGTTATCGACTCAGTAGCAGCTTTAGTACCACGTGCAGAGATTGACGGGGAGATGGGTGAC
TCACACGTAGGGTTACAAGCTCGTTTGATGTCTCAAGCCTTACGTAAACTCTCAGGATCGATCAACAAAACAAAAACGAT
CGCGATTTTCATCAACCAAATTCGTGAAAAAGTTGGCGTGATGTTCGGTAATCCAGAAATCACACCAGGAGGACGTGCGT
TGAAGTTCTACGCAACGATCCGTTTGGAAGTACGTCGTGCGGAACAATTGAAACAAGGAACGGACATTGTCGGTAACCGT
ACAAAGATCAAAGTCGTAAAAAATAAAGTAGCACCACCATTCAAAATCGCTGAAGTCGATGTGATGTATGGCTTAGGTAT
CTCTCAAGAAGGCGAGCTATTGGATATGGCAGTTGAAAAAGATATCGTTGATAAGAGTGGTGCATGGTATTCTTACAAAG
AAGATCGCATCGGTCAAGGTCGTGAAAACGCGAAAATCTATATGTCAAATCATCCAGAGATGATGGCTGAAGTATCTACA
TTAGTGCGTGCAGCTTATGGCATCGGTGAACCAGTTGATGTACCAGAAGAAGCACAAGAAGAATTACCACTAGATGAATA
A


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1L8V0B9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Latilactobacillus sakei subsp. sakei 23K

78.779

99.422

0.783

  recA Bacillus subtilis subsp. subtilis str. 168

79.385

93.931

0.746

  recA Streptococcus pneumoniae D39

67.778

100

0.705

  recA Streptococcus pneumoniae R6

67.778

100

0.705

  recA Streptococcus pneumoniae Rx1

67.778

100

0.705

  recA Streptococcus pneumoniae TIGR4

67.778

100

0.705

  recA Streptococcus mitis SK321

68.513

99.133

0.679

  recA Streptococcus mitis NCTC 12261

68.421

98.844

0.676

  recA Streptococcus mutans UA159

67.055

99.133

0.665

  recA Streptococcus pyogenes NZ131

69.184

95.665

0.662

  recA Lactococcus lactis subsp. cremoris KW2

67.781

95.087

0.645

  recA Neisseria gonorrhoeae strain FA1090

59.942

98.844

0.592

  recA Neisseria gonorrhoeae MS11

59.942

98.844

0.592

  recA Neisseria gonorrhoeae MS11

59.942

98.844

0.592

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.691

94.509

0.592

  recA Acinetobacter baumannii D1279779

58.621

100

0.59

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.702

95.087

0.587

  recA Ralstonia pseudosolanacearum GMI1000

61.28

94.798

0.581

  recA Helicobacter pylori strain NCTC11637

57.895

98.844

0.572

  recA Helicobacter pylori 26695

57.895

98.844

0.572

  recA Vibrio cholerae O1 biovar El Tor strain E7946

61.3

93.353

0.572

  recA Vibrio cholerae strain A1552

61.3

93.353

0.572

  recA Acinetobacter baylyi ADP1

60.991

93.353

0.569

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.615

93.931

0.569

  recA Pseudomonas stutzeri DSM 10701

60.494

93.642

0.566

  recA Glaesserella parasuis strain SC1401

60.748

92.775

0.564


Multiple sequence alignment