Detailed information NTG1146488

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: LZ3411_RS08250
• Genome accession: NZ_LT854705
• Coordinates: 1725339..1726511 (-)
• Length: 390 a.a.
• NCBI ID: WP_087742218.1
• Uniprot ID: -
• Organism: Levilactobacillus zymae strain ACA-DC 3411
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1720339..1731511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ3411_RS08240 (LZ3411_1583)	-	1722574..1723371 (-)	798	WP_057733304.1	TIGR00282 family metallophosphoesterase	-
LZ3411_RS08245 (LZ3411_1584)	rny	1723500..1725059 (-)	1560	WP_057733302.1	ribonuclease Y	-
LZ3411_RS08250 (LZ3411_1585)	recA	1725339..1726511 (-)	1173	WP_087742218.1	recombinase RecA	Machinery gene
LZ3411_RS08255 (LZ3411_1586)	cinA	1726604..1727854 (-)	1251	WP_087742219.1	competence/damage-inducible protein A	Machinery gene
LZ3411_RS08260 (LZ3411_1587)	pgsA	1727974..1728561 (-)	588	WP_087742220.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LZ3411_RS08265 (LZ3411_1588)	-	1728634..1729578 (-)	945	WP_087742221.1	helix-turn-helix domain-containing protein	-
LZ3411_RS08270 (LZ3411_1589)	yfmH	1729671..1730978 (-)	1308	WP_087742222.1	EF-P 5-aminopentanol modification-associated protein YfmH	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 41556.12 Da
• Isoelectric Point: 6.7755

>NTDB_id=1146488 LZ3411_RS08250 WP_087742218.1 1725339..1726511(-) (recA) [Levilactobacillus zymae strain ACA-DC 3411]
MADERQAALDKALKKIEKDFGKGSIMRMGDDTKMQILTVPSGSLALDVALGVGGYPRGRIVEIYGPESSGKTTVALHAVA
EVQKRGGTAAYIDAENALDPAYATALGVDIDNLLLSQPDTGEQGLQITDALVSSGAVDIVVVDSVAALVPRAEIEGEMGD
AHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTIRLEVRRAEQIKNGTDVIGNR
TRIKVVKNKVAPPFKKAEVDIMYGHGISQTGELLDMAVEKDIVDKSGSWYSYGEDRIGQGRENAKQYLADHPDMMAEVNQ
RVRAAYGVADEDAAATDTKDTKADKTKDGAKADTKATPKDAATKPASKVDTTPGTPGNSGATVIQPNHHK

Nucleotide

• Length: 1173 bp

>NTDB_id=1146488 LZ3411_RS08250 WP_087742218.1 1725339..1726511(-) (recA) [Levilactobacillus zymae strain ACA-DC 3411]
ATGGCTGACGAACGACAAGCAGCGTTAGACAAAGCGCTGAAGAAGATCGAAAAGGACTTCGGTAAGGGGTCCATCATGCG
GATGGGCGACGATACCAAGATGCAAATCTTGACCGTCCCATCTGGCTCGTTGGCTTTAGACGTAGCCTTAGGAGTCGGCG
GTTACCCGCGGGGACGGATCGTAGAAATCTACGGTCCCGAATCGTCTGGGAAAACCACGGTGGCCTTACACGCGGTTGCC
GAAGTGCAAAAGCGTGGGGGTACGGCGGCTTACATTGATGCCGAAAACGCCCTCGATCCCGCCTATGCGACGGCTTTAGG
TGTCGATATCGACAACTTACTGTTATCCCAACCAGATACCGGGGAACAGGGACTCCAAATCACGGATGCCCTGGTGTCCT
CCGGGGCCGTGGATATCGTGGTCGTCGATTCGGTGGCGGCCTTAGTACCACGGGCCGAAATTGAAGGCGAAATGGGTGAC
GCCCACGTGGGATTGCAGGCCCGGTTAATGTCACAAGCGCTCCGGAAGTTATCGGGGACCATTAACAAGACCAAGACCAT
TGCGTTGTTCATTAACCAAATTCGGGAAAAAGTCGGCGTGATGTTCGGGAACCCCGAAGTAACGCCCGGCGGCCGGGCCT
TGAAGTTCTACTCGACGATTCGTTTGGAAGTTCGTCGGGCCGAACAGATCAAGAACGGGACGGACGTCATTGGGAACCGG
ACCCGGATCAAGGTCGTGAAGAACAAGGTTGCGCCGCCGTTTAAGAAGGCCGAAGTGGACATCATGTACGGTCACGGGAT
TTCCCAAACGGGTGAACTGCTCGACATGGCGGTGGAAAAAGACATCGTGGATAAGAGTGGCTCATGGTACTCGTACGGTG
AAGACCGGATCGGCCAAGGACGGGAGAACGCCAAGCAATATCTGGCGGATCATCCGGACATGATGGCGGAAGTCAATCAA
CGGGTGCGGGCCGCGTATGGGGTGGCCGATGAGGACGCTGCTGCGACCGACACGAAGGATACTAAGGCGGATAAGACCAA
GGACGGCGCTAAAGCCGATACCAAGGCAACGCCTAAGGATGCCGCGACGAAACCGGCGTCCAAGGTGGATACCACGCCCG
GGACGCCCGGTAATTCCGGCGCCACGGTGATTCAACCCAATCATCATAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	87.5	84.103	0.736
recA	Bacillus subtilis subsp. subtilis str. 168	75.61	84.103	0.636
recA	Streptococcus mutans UA159	65.546	91.538	0.6
recA	Streptococcus mitis SK321	68.023	88.205	0.6
recA	Streptococcus pneumoniae R6	66.477	90.256	0.6
recA	Streptococcus pneumoniae Rx1	66.477	90.256	0.6
recA	Streptococcus pneumoniae D39	66.477	90.256	0.6
recA	Streptococcus pneumoniae TIGR4	66.477	90.256	0.6
recA	Streptococcus mitis NCTC 12261	67.442	88.205	0.595
recA	Streptococcus pyogenes NZ131	68.882	84.872	0.585
recA	Lactococcus lactis subsp. cremoris KW2	67.56	86.154	0.582
recA	Neisseria gonorrhoeae MS11	61.702	84.359	0.521
recA	Neisseria gonorrhoeae MS11	61.702	84.359	0.521
recA	Neisseria gonorrhoeae strain FA1090	61.702	84.359	0.521
recA	Pseudomonas stutzeri DSM 10701	57.849	88.205	0.51
recA	Ralstonia pseudosolanacearum GMI1000	63.578	80.256	0.51
recA	Acinetobacter baylyi ADP1	57.895	87.692	0.508
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.923	83.333	0.508
recA	Vibrio cholerae strain A1552	60.372	82.821	0.5
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.372	82.821	0.5
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.327	83.846	0.497
recA	Acinetobacter baumannii D1279779	59.133	82.821	0.49
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.447	84.359	0.485
recA	Glaesserella parasuis strain SC1401	58.567	82.308	0.482
recA	Helicobacter pylori 26695	56.364	84.615	0.477
recA	Helicobacter pylori strain NCTC11637	56.364	84.615	0.477