Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DQN57_RS08750 | Genome accession | NZ_LS483415 |
| Coordinates | 1704543..1705679 (-) | Length | 378 a.a. |
| NCBI ID | WP_111705837.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC8304 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1696049..1723758 | 1704543..1705679 | within | 0 |
Gene organization within MGE regions
Location: 1696049..1723758
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN57_RS08705 (NCTC8304_01724) | nrdG | 1696049..1696663 (-) | 615 | WP_111705833.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| DQN57_RS08710 (NCTC8304_01725) | - | 1696663..1697172 (-) | 510 | WP_002991345.1 | GNAT family N-acetyltransferase | - |
| DQN57_RS08715 (NCTC8304_01726) | - | 1697181..1698116 (-) | 936 | WP_002992828.1 | Gfo/Idh/MocA family protein | - |
| DQN57_RS09280 (NCTC8304_01727) | - | 1698145..1698291 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| DQN57_RS08720 (NCTC8304_01728) | nrdD | 1698473..1700671 (-) | 2199 | WP_111705834.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| DQN57_RS08725 (NCTC8304_01729) | - | 1700768..1702327 (-) | 1560 | WP_111705835.1 | DUF2079 domain-containing protein | - |
| DQN57_RS08730 (NCTC8304_01731) | - | 1702740..1703045 (-) | 306 | WP_111705836.1 | DUF1292 domain-containing protein | - |
| DQN57_RS08735 (NCTC8304_01732) | ruvX | 1703057..1703476 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| DQN57_RS08740 (NCTC8304_01733) | - | 1703473..1703742 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| DQN57_RS08745 (NCTC8304_01734) | spx | 1703855..1704253 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| DQN57_RS08750 (NCTC8304_01735) | recA | 1704543..1705679 (-) | 1137 | WP_111705837.1 | recombinase RecA | Machinery gene |
| DQN57_RS08755 (NCTC8304_01736) | cinA | 1705768..1707039 (-) | 1272 | WP_111705838.1 | competence/damage-inducible protein A | Machinery gene |
| DQN57_RS08760 (NCTC8304_01737) | - | 1707108..1707668 (-) | 561 | WP_030127533.1 | DNA-3-methyladenine glycosylase I | - |
| DQN57_RS08765 (NCTC8304_01738) | ruvA | 1707678..1708274 (-) | 597 | WP_002991359.1 | Holliday junction branch migration protein RuvA | - |
| DQN57_RS08770 (NCTC8304_01739) | - | 1708276..1709496 (-) | 1221 | WP_014612636.1 | MDR family MFS transporter | - |
| DQN57_RS08775 (NCTC8304_01740) | mutL | 1709507..1711489 (-) | 1983 | WP_011018317.1 | DNA mismatch repair endonuclease MutL | - |
| DQN57_RS08780 (NCTC8304_01741) | - | 1711584..1712729 (-) | 1146 | WP_021775554.1 | tyrosine-type recombinase/integrase | - |
| DQN57_RS08790 (NCTC8304_01742) | - | 1713362..1714189 (-) | 828 | WP_014411910.1 | hypothetical protein | - |
| DQN57_RS09285 | - | 1714221..1714370 (+) | 150 | WP_154079230.1 | hypothetical protein | - |
| DQN57_RS08795 (NCTC8304_01743) | - | 1714596..1715387 (-) | 792 | WP_014411911.1 | helix-turn-helix domain-containing protein | - |
| DQN57_RS08800 (NCTC8304_01744) | - | 1715542..1715712 (+) | 171 | WP_032467166.1 | helix-turn-helix transcriptional regulator | - |
| DQN57_RS08805 (NCTC8304_01745) | - | 1715767..1716174 (+) | 408 | WP_011185070.1 | hypothetical protein | - |
| DQN57_RS08810 (NCTC8304_01746) | - | 1716188..1716805 (+) | 618 | WP_023080068.1 | Rha family transcriptional regulator | - |
| DQN57_RS08815 (NCTC8304_01747) | - | 1717051..1717383 (+) | 333 | WP_111681407.1 | hypothetical protein | - |
| DQN57_RS08820 (NCTC8304_01748) | - | 1717380..1717601 (+) | 222 | WP_111705839.1 | hypothetical protein | - |
| DQN57_RS08825 (NCTC8304_01749) | - | 1717604..1717795 (+) | 192 | WP_111681408.1 | hypothetical protein | - |
| DQN57_RS08830 (NCTC8304_01750) | - | 1717807..1718136 (+) | 330 | WP_111705840.1 | hypothetical protein | - |
| DQN57_RS08835 (NCTC8304_01751) | - | 1718139..1718411 (+) | 273 | WP_001100459.1 | hypothetical protein | - |
| DQN57_RS08840 (NCTC8304_01752) | - | 1718412..1719269 (+) | 858 | WP_111705841.1 | primase alpha helix C-terminal domain-containing protein | - |
| DQN57_RS08845 (NCTC8304_01753) | - | 1719238..1720926 (+) | 1689 | WP_002992487.1 | DNA primase family protein | - |
| DQN57_RS08850 (NCTC8304_01754) | - | 1721213..1721386 (+) | 174 | WP_000694577.1 | hypothetical protein | - |
| DQN57_RS09290 (NCTC8304_01755) | - | 1721392..1721565 (+) | 174 | WP_014407944.1 | hypothetical protein | - |
| DQN57_RS08855 (NCTC8304_01756) | - | 1721567..1722076 (+) | 510 | WP_023611171.1 | hypothetical protein | - |
| DQN57_RS08860 (NCTC8304_01757) | - | 1722150..1722638 (+) | 489 | WP_002992480.1 | hypothetical protein | - |
| DQN57_RS08865 (NCTC8304_01758) | - | 1723038..1723400 (+) | 363 | WP_032461242.1 | DUF1492 domain-containing protein | - |
| DQN57_RS08870 (NCTC8304_01759) | - | 1723375..1723758 (+) | 384 | WP_111677542.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40662.24 Da Isoelectric Point: 4.8451
>NTDB_id=1140839 DQN57_RS08750 WP_111705837.1 1704543..1705679(-) (recA) [Streptococcus pyogenes strain NCTC8304]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNSEKIGQGSE
NAKRYLADHPELFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNSEKIGQGSE
NAKRYLADHPELFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=1140839 DQN57_RS08750 WP_111705837.1 1704543..1705679(-) (recA) [Streptococcus pyogenes strain NCTC8304]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGACCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCCGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATAGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGACCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCCGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATAGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.