Detailed information NTG1139157

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DQM54_RS10220
• Genome accession: NZ_LS483375
• Coordinates: 2063503..2064654 (-)
• Length: 383 a.a.
• NCBI ID: WP_008809971.1
• Uniprot ID: A0A139MZF4
• Organism: Streptococcus gordonii strain NCTC3165
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2058503..2069654

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM54_RS10185 (NCTC3165_02027)	-	2059092..2059574 (-)	483	WP_008809964.1	SP_0198 family lipoprotein	-
DQM54_RS10190 (NCTC3165_02028)	-	2059682..2060920 (-)	1239	WP_008809965.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
DQM54_RS10195 (NCTC3165_02029)	-	2061171..2061482 (-)	312	WP_008809966.1	DUF1292 domain-containing protein	-
DQM54_RS10200 (NCTC3165_02030)	ruvX	2061503..2061922 (-)	420	WP_012131012.1	Holliday junction resolvase RuvX	-
DQM54_RS10205 (NCTC3165_02031)	-	2061922..2062188 (-)	267	WP_008809968.1	IreB family regulatory phosphoprotein	-
DQM54_RS10210 (NCTC3165_02032)	-	2062300..2062872 (-)	573	WP_061585388.1	SP0191 family lipoprotein	-
DQM54_RS10215 (NCTC3165_02033)	spx	2063018..2063416 (-)	399	WP_008809970.1	transcriptional regulator Spx	-
DQM54_RS10220 (NCTC3165_02034)	recA	2063503..2064654 (-)	1152	WP_008809971.1	recombinase RecA	Machinery gene
DQM54_RS10225 (NCTC3165_02035)	cinA	2064713..2065969 (-)	1257	WP_172455856.1	competence/damage-inducible protein A	Machinery gene
DQM54_RS10235 (NCTC3165_02036)	-	2066237..2066647 (+)	411	WP_111724227.1	helix-turn-helix domain-containing protein	-
DQM54_RS10240 (NCTC3165_02037)	-	2066698..2067357 (-)	660	WP_111724228.1	CPBP family intramembrane glutamic endopeptidase	-
DQM54_RS10245 (NCTC3165_02038)	-	2067362..2067916 (-)	555	WP_111724229.1	DNA-3-methyladenine glycosylase I	-
DQM54_RS10250 (NCTC3165_02039)	ruvA	2067926..2068519 (-)	594	WP_111724230.1	Holliday junction branch migration protein RuvA	-
DQM54_RS10255 (NCTC3165_02040)	-	2068687..2069190 (+)	504	WP_111724322.1	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 41290.86 Da
• Isoelectric Point: 4.7868

>NTDB_id=1139157 DQM54_RS10220 WP_008809971.1 2063503..2064654(-) (recA) [Streptococcus gordonii strain NCTC3165]
MAKKQKNLDDITKKFGDERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDAKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLNIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEVFDEIDRQVRVRFGLIEDDQEGEATATETAGKITENIEEVTLELDDAIEIEE

Nucleotide

• Length: 1152 bp

>NTDB_id=1139157 DQM54_RS10220 WP_008809971.1 2063503..2064654(-) (recA) [Streptococcus gordonii strain NCTC3165]
ATGGCAAAGAAACAAAAGAATCTAGATGATATTACAAAAAAATTTGGAGACGAGCGCCAAAAAGCTTTGGACAACGCCCT
GAAGAACATTGAAAAGGACTTCGGTAAGGGAGCGATTATGCGTCTGGGCGAGCGAGCAGAACAAAAGGTTCAAGTCATGA
GTTCAGGATCTTTGGCCTTGGATATCGCCCTTGGTGCCGGTGGTTATCCTAAGGGACGTATCATTGAAATCTACGGTCCA
GAGTCTTCTGGTAAGACGACTGTTGCCCTTCATGCTGTTGCTCAAGCGCAAAAAGAGGGTGGTATTGCAGCCTTTATTGA
TGCAGAGCACGCTTTGGATCCATCTTACGCGGCTGCTCTAGGTGTAAATATTGATGAGCTGTTGCTATCTCAACCAGATT
CTGGTGAGCAAGGTTTGGAAATTGCAGGAAAATTGATTGACTCTGGTGCAGTTGATTTAGTTGTCATTGACTCCGTTGCA
GCTCTTGTACCACGTGCGGAAATCGATGGCGATATTGGAGATAGCCACGTTGGTCTGCAGGCTCGGATGATGAGTCAGGC
CATGCGTAAACTGTCTGCTTCTATCAATAAAACAAAAACAATTGCCATCTTTATCAACCAACTTCGCGAAAAGGTTGGGG
TTATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTCCGTTTGGATGTCCGTGGG
AATACTCAAATTAAAGGAACTGGCGATGCTAAGGATACAAATGTTGGTAAGGAAACCAAGATTAAGGTCGTGAAAAACAA
GGTAGCTCCGCCATTTAAAGAAGCCTTCGTGGAAATCATGTATGGAGAAGGAATTTCTAAGACTGGTGAACTGATCAAGA
TTGCAACAGACTTGAATATCATCAAAAAAGCAGGTGCTTGGTATTCTTATAATGACGAGAAGATTGGTCAAGGTTCTGAA
AATGCCAAGAAATATTTGGCAGATCACCCAGAAGTCTTTGACGAAATCGATCGTCAAGTCCGTGTCCGTTTTGGCTTGAT
TGAAGATGATCAAGAAGGGGAAGCAACTGCGACTGAAACTGCAGGAAAAATCACTGAAAACATTGAAGAAGTGACTCTTG
AACTAGACGATGCTATAGAGATCGAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

3D structure

• AlphaFold DB: A0A139MZF4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mitis SK321	88.22	99.739	0.88
recA	Streptococcus mitis NCTC 12261	88.22	99.739	0.88
recA	Streptococcus pneumoniae D39	86.269	100	0.869
recA	Streptococcus pneumoniae R6	86.269	100	0.869
recA	Streptococcus pneumoniae Rx1	86.269	100	0.869
recA	Streptococcus pneumoniae TIGR4	86.269	100	0.869
recA	Streptococcus pyogenes NZ131	85.64	100	0.856
recA	Streptococcus mutans UA159	84.974	100	0.856
recA	Lactococcus lactis subsp. cremoris KW2	78.857	91.384	0.721
recA	Latilactobacillus sakei subsp. sakei 23K	66.209	95.039	0.629
recA	Bacillus subtilis subsp. subtilis str. 168	68.997	85.901	0.593
recA	Neisseria gonorrhoeae MS11	59.544	91.645	0.546
recA	Neisseria gonorrhoeae strain FA1090	59.544	91.645	0.546
recA	Neisseria gonorrhoeae MS11	59.544	91.645	0.546
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.467	84.334	0.535
recA	Acinetobacter baylyi ADP1	58.892	89.556	0.527
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.846	84.856	0.525
recA	Vibrio cholerae strain A1552	61.846	84.856	0.525
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.542	86.684	0.525
recA	Glaesserella parasuis strain SC1401	58.702	88.512	0.52
recA	Acinetobacter baumannii D1279779	60.923	84.856	0.517
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.704	86.423	0.499
recA	Helicobacter pylori 26695	57.576	86.162	0.496
recA	Helicobacter pylori strain NCTC11637	57.576	86.162	0.496
recA	Pseudomonas stutzeri DSM 10701	57.927	85.64	0.496
recA	Ralstonia pseudosolanacearum GMI1000	59.937	82.768	0.496