Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DQM50_RS09445 | Genome accession | NZ_LS483347 |
| Coordinates | 1829233..1830369 (-) | Length | 378 a.a. |
| NCBI ID | WP_002992179.1 | Uniprot ID | A0A4Q1QZP2 |
| Organism | Streptococcus pyogenes strain NCTC8324 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1820737..1848944 | 1829233..1830369 | within | 0 |
Gene organization within MGE regions
Location: 1820737..1848944
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM50_RS09400 (NCTC8324_01880) | nrdG | 1820737..1821351 (-) | 615 | WP_021775544.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| DQM50_RS09405 (NCTC8324_01881) | - | 1821366..1821860 (-) | 495 | WP_014407930.1 | GNAT family N-acetyltransferase | - |
| DQM50_RS09410 (NCTC8324_01882) | - | 1821869..1822804 (-) | 936 | WP_076634441.1 | Gfo/Idh/MocA family protein | - |
| DQM50_RS10025 (NCTC8324_01883) | - | 1822833..1822979 (-) | 147 | WP_023610752.1 | hypothetical protein | - |
| DQM50_RS09415 (NCTC8324_01884) | nrdD | 1823161..1825359 (-) | 2199 | WP_085613596.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| DQM50_RS09420 (NCTC8324_01885) | - | 1825456..1827015 (-) | 1560 | WP_030126183.1 | membrane protein | - |
| DQM50_RS09425 (NCTC8324_01887) | - | 1827429..1827734 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| DQM50_RS09430 (NCTC8324_01888) | ruvX | 1827746..1828165 (-) | 420 | WP_085613595.1 | Holliday junction resolvase RuvX | - |
| DQM50_RS09435 (NCTC8324_01889) | - | 1828162..1828431 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| DQM50_RS09440 (NCTC8324_01890) | spx | 1828544..1828942 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| DQM50_RS09445 (NCTC8324_01891) | recA | 1829233..1830369 (-) | 1137 | WP_002992179.1 | recombinase RecA | Machinery gene |
| DQM50_RS09450 (NCTC8324_01892) | cinA | 1830458..1831729 (-) | 1272 | WP_030127534.1 | competence/damage-inducible protein A | Machinery gene |
| DQM50_RS09455 (NCTC8324_01893) | - | 1831798..1832358 (-) | 561 | WP_085613594.1 | DNA-3-methyladenine glycosylase I | - |
| DQM50_RS09460 (NCTC8324_01894) | ruvA | 1832368..1832961 (-) | 594 | WP_003058778.1 | Holliday junction branch migration protein RuvA | - |
| DQM50_RS09465 (NCTC8324_01895) | - | 1832963..1834183 (-) | 1221 | WP_085613593.1 | MDR family MFS transporter | - |
| DQM50_RS09470 (NCTC8324_01896) | mutL | 1834194..1836176 (-) | 1983 | WP_085613592.1 | DNA mismatch repair endonuclease MutL | - |
| DQM50_RS09475 (NCTC8324_01897) | - | 1836271..1837422 (-) | 1152 | WP_023612650.1 | tyrosine-type recombinase/integrase | - |
| DQM50_RS10250 | - | 1837744..1837887 (+) | 144 | WP_011185066.1 | putative holin-like toxin | - |
| DQM50_RS09485 (NCTC8324_01899) | - | 1838758..1839438 (-) | 681 | WP_011185067.1 | helix-turn-helix domain-containing protein | - |
| DQM50_RS09490 (NCTC8324_01900) | - | 1839602..1839799 (+) | 198 | WP_011185068.1 | helix-turn-helix domain-containing protein | - |
| DQM50_RS09495 (NCTC8324_01901) | - | 1839813..1840433 (+) | 621 | WP_172451634.1 | Bro-N domain-containing protein | - |
| DQM50_RS09500 (NCTC8324_01902) | - | 1840460..1840702 (+) | 243 | WP_000648623.1 | hypothetical protein | - |
| DQM50_RS10030 (NCTC8324_01903) | - | 1840962..1841132 (+) | 171 | WP_021775540.1 | hypothetical protein | - |
| DQM50_RS09505 (NCTC8324_01904) | - | 1841356..1841529 (+) | 174 | WP_000074663.1 | plasmid mobilization protein | - |
| DQM50_RS09510 (NCTC8324_01905) | - | 1841715..1842119 (+) | 405 | WP_227868812.1 | hypothetical protein | - |
| DQM50_RS09515 (NCTC8324_01906) | - | 1842221..1842553 (+) | 333 | WP_021775546.1 | hypothetical protein | - |
| DQM50_RS09520 (NCTC8324_01907) | - | 1842550..1842771 (+) | 222 | WP_021775572.1 | hypothetical protein | - |
| DQM50_RS09525 (NCTC8324_01908) | - | 1842774..1842965 (+) | 192 | WP_021775551.1 | hypothetical protein | - |
| DQM50_RS09530 (NCTC8324_01909) | - | 1842977..1843306 (+) | 330 | WP_003058810.1 | hypothetical protein | - |
| DQM50_RS09535 (NCTC8324_01910) | - | 1843309..1843581 (+) | 273 | WP_000051914.1 | hypothetical protein | - |
| DQM50_RS09540 (NCTC8324_01911) | - | 1843582..1844448 (+) | 867 | WP_111688577.1 | primase alpha helix C-terminal domain-containing protein | - |
| DQM50_RS09545 (NCTC8324_01912) | - | 1844460..1845854 (+) | 1395 | Protein_1786 | VapE domain-containing protein | - |
| DQM50_RS09550 (NCTC8324_01914) | - | 1846148..1846402 (+) | 255 | WP_001069294.1 | hypothetical protein | - |
| DQM50_RS09555 (NCTC8324_01915) | - | 1846399..1846572 (+) | 174 | WP_000694576.1 | hypothetical protein | - |
| DQM50_RS10035 | - | 1846578..1846751 (+) | 174 | WP_168389368.1 | hypothetical protein | - |
| DQM50_RS09560 (NCTC8324_01916) | - | 1846753..1847262 (+) | 510 | WP_021775557.1 | hypothetical protein | - |
| DQM50_RS09565 (NCTC8324_01917) | - | 1847336..1847824 (+) | 489 | WP_002992480.1 | hypothetical protein | - |
| DQM50_RS09570 (NCTC8324_01918) | - | 1848224..1848586 (+) | 363 | WP_020905578.1 | DUF1492 domain-containing protein | - |
| DQM50_RS09575 (NCTC8324_01919) | - | 1848561..1848944 (+) | 384 | WP_111688579.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40631.23 Da Isoelectric Point: 4.9004
>NTDB_id=1137788 DQM50_RS09445 WP_002992179.1 1829233..1830369(-) (recA) [Streptococcus pyogenes strain NCTC8324]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=1137788 DQM50_RS09445 WP_002992179.1 1829233..1830369(-) (recA) [Streptococcus pyogenes strain NCTC8324]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATAAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATAAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.