Detailed information NTG1137617

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DQL21_RS09250
• Genome accession: NZ_LS483343
• Coordinates: 1805477..1806628 (-)
• Length: 383 a.a.
• NCBI ID: WP_018030470.1
• Uniprot ID: A0A2X3W6X2
• Organism: Streptococcus ferus strain NCTC12278
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1800477..1811628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL21_RS09755 (NCTC12278_01850)	-	1801477..1801605 (-)	129	WP_018030479.1	hypothetical protein	-
DQL21_RS09210 (NCTC12278_01851)	-	1801678..1801977 (-)	300	WP_018030478.1	DUF1292 domain-containing protein	-
DQL21_RS09215 (NCTC12278_01852)	ruvX	1801987..1802406 (-)	420	WP_018030477.1	Holliday junction resolvase RuvX	-
DQL21_RS09220 (NCTC12278_01853)	-	1802403..1802672 (-)	270	WP_018030476.1	IreB family regulatory phosphoprotein	-
DQL21_RS09225 (NCTC12278_01854)	-	1802845..1803303 (+)	459	WP_018030475.1	LytTR family DNA-binding domain-containing protein	-
DQL21_RS09230 (NCTC12278_01855)	-	1803290..1803751 (+)	462	WP_018030474.1	DUF3021 domain-containing protein	-
DQL21_RS09235 (NCTC12278_01856)	-	1803812..1804438 (-)	627	WP_018030473.1	SP0191 family lipoprotein	-
DQL21_RS09240 (NCTC12278_01857)	-	1804456..1804884 (-)	429	WP_018030472.1	hypothetical protein	-
DQL21_RS09245 (NCTC12278_01858)	spx	1804997..1805395 (-)	399	WP_018030471.1	transcriptional regulator Spx	-
DQL21_RS09250 (NCTC12278_01859)	recA	1805477..1806628 (-)	1152	WP_018030470.1	recombinase RecA	Machinery gene
DQL21_RS09255 (NCTC12278_01860)	cinA	1806669..1807925 (-)	1257	WP_018030469.1	competence/damage-inducible protein A	Machinery gene
DQL21_RS09260 (NCTC12278_01861)	-	1808087..1808644 (-)	558	WP_018030468.1	DNA-3-methyladenine glycosylase I	-
DQL21_RS09265 (NCTC12278_01862)	ruvA	1808673..1809263 (-)	591	WP_018030467.1	Holliday junction branch migration protein RuvA	-
DQL21_RS09270 (NCTC12278_01863)	mutL	1809366..1811324 (-)	1959	WP_408641227.1	DNA mismatch repair endonuclease MutL	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 41217.98 Da
• Isoelectric Point: 5.1515

>NTDB_id=1137617 DQL21_RS09250 WP_018030470.1 1805477..1806628(-) (recA) [Streptococcus ferus strain NCTC12278]
MAKKVKKTEGVTKKFGDERKKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKDGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGDQKDSNIGKETKIKVVKNKIAPPFKEAFVEIMYGEGISRTGELVKIASEQDIIQKAGAWYSYKGEKIGQGSE
NAKKFLADNPEIFDEIDHKVRVKFGLIEETQAETISDEKVQKADTAAKEDLVLDLEDAIELED

Nucleotide

• Length: 1152 bp

>NTDB_id=1137617 DQL21_RS09250 WP_018030470.1 1805477..1806628(-) (recA) [Streptococcus ferus strain NCTC12278]
ATGGCAAAAAAAGTAAAAAAAACAGAAGGTGTTACCAAAAAGTTTGGTGATGAGCGTAAGAAAGCGCTGGATGACGCCTT
AAAAAATATCGAAAAGGATTTTGGTAAGGGAGCGGTTATGCGCCTAGGAGAGCGGGCGGAACAAAAGGTTCAAGTGATGA
GTTCGGGCAGTTTGGCACTTGATATCGCTCTAGGTGCTGGTGGCTATCCAAAAGGACGTATCATTGAAATTTACGGCCCT
GAAAGTTCTGGTAAAACAACTGTTGCCCTTCATGCGGTTGCTCAGGCGCAAAAGGATGGCGGCATCGCAGCCTTTATTGA
CGCAGAGCATGCACTTGACCCAGCCTATGCCGCAGCTCTCGGTGTCAATATCGATGAATTGTTGCTGTCTCAGCCGGATT
CAGGAGAGCAGGGGCTTGAAATTGCCGGAAAATTGATTGACTCAGGCGCTGTGGATCTTGTTGTCGTTGACTCAGTCGCA
GCTCTGGTTCCCCGAGCAGAAATTGACGGAGACATTGGAGACAGTCATGTTGGTTTGCAGGCCCGTATGATGAGTCAGGC
GATGCGCAAGCTGTCTGCTTCTATCAACAAAACCAAGACGATTGCTATTTTTATTAACCAGCTGCGTGAAAAAGTAGGAA
TTATGTTTGGGAATCCGGAAACAACTCCTGGGGGACGAGCGCTTAAGTTCTACTCTTCAGTTCGTTTGGATGTCCGCGGG
AACACACAGATTAAAGGAACAGGCGATCAAAAAGACAGTAATATTGGTAAAGAAACCAAAATTAAAGTGGTCAAAAATAA
GATTGCGCCTCCGTTCAAAGAAGCTTTTGTGGAAATTATGTATGGCGAAGGGATTTCTCGTACAGGTGAGCTGGTTAAGA
TCGCCAGCGAACAGGATATCATCCAGAAGGCAGGAGCTTGGTATTCCTATAAGGGTGAAAAAATTGGTCAGGGATCAGAA
AATGCTAAAAAATTCTTAGCAGATAATCCAGAAATCTTTGACGAAATCGATCATAAAGTGCGTGTCAAATTTGGTCTGAT
TGAAGAGACACAGGCAGAAACAATCTCAGACGAAAAGGTGCAAAAGGCTGACACTGCAGCAAAAGAAGACCTTGTCTTAG
ACCTTGAGGACGCTATCGAACTGGAAGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

3D structure

• AlphaFold DB: A0A2X3W6X2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mutans UA159	90.862	100	0.909
recA	Streptococcus pyogenes NZ131	86.528	100	0.872
recA	Streptococcus mitis NCTC 12261	86.162	100	0.862
recA	Streptococcus mitis SK321	85.079	99.739	0.849
recA	Streptococcus pneumoniae R6	84.416	100	0.849
recA	Streptococcus pneumoniae Rx1	84.416	100	0.849
recA	Streptococcus pneumoniae D39	84.416	100	0.849
recA	Streptococcus pneumoniae TIGR4	84.416	100	0.849
recA	Lactococcus lactis subsp. cremoris KW2	75.429	91.384	0.689
recA	Latilactobacillus sakei subsp. sakei 23K	68.3	90.601	0.619
recA	Bacillus subtilis subsp. subtilis str. 168	68.693	85.901	0.59
recA	Acinetobacter baumannii D1279779	60.756	89.817	0.546
recA	Neisseria gonorrhoeae MS11	60.933	89.556	0.546
recA	Neisseria gonorrhoeae MS11	60.933	89.556	0.546
recA	Neisseria gonorrhoeae strain FA1090	60.933	89.556	0.546
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.234	89.295	0.538
recA	Glaesserella parasuis strain SC1401	60.294	88.773	0.535
recA	Acinetobacter baylyi ADP1	62.462	84.856	0.53
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.92	84.334	0.522
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.231	84.856	0.52
recA	Vibrio cholerae strain A1552	61.231	84.856	0.52
recA	Pseudomonas stutzeri DSM 10701	56.609	90.862	0.514
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.61	86.423	0.507
recA	Helicobacter pylori 26695	56.886	87.206	0.496
recA	Helicobacter pylori strain NCTC11637	56.886	87.206	0.496
recA	Ralstonia pseudosolanacearum GMI1000	59.306	82.768	0.491