Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DQM36_RS09130 | Genome accession | NZ_LS483332 |
| Coordinates | 1759862..1760998 (-) | Length | 378 a.a. |
| NCBI ID | WP_002992179.1 | Uniprot ID | A0A4Q1QZP2 |
| Organism | Streptococcus pyogenes strain NCTC12696 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1751365..1779119 | 1759862..1760998 | within | 0 |
Gene organization within MGE regions
Location: 1751365..1779119
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM36_RS09085 (NCTC12696_01789) | nrdG | 1751365..1751979 (-) | 615 | WP_002982219.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| DQM36_RS09090 (NCTC12696_01790) | - | 1751979..1752488 (-) | 510 | WP_002991345.1 | GNAT family N-acetyltransferase | - |
| DQM36_RS09095 (NCTC12696_01791) | - | 1752497..1753432 (-) | 936 | WP_002992828.1 | Gfo/Idh/MocA family protein | - |
| DQM36_RS09670 (NCTC12696_01792) | - | 1753461..1753607 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| DQM36_RS09100 (NCTC12696_01793) | nrdD | 1753789..1755987 (-) | 2199 | WP_002992831.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| DQM36_RS09105 (NCTC12696_01794) | - | 1756084..1757643 (-) | 1560 | WP_002992833.1 | membrane protein | - |
| DQM36_RS09110 (NCTC12696_01796) | - | 1758056..1758361 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| DQM36_RS09115 (NCTC12696_01797) | ruvX | 1758373..1758792 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| DQM36_RS09120 (NCTC12696_01798) | - | 1758789..1759058 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| DQM36_RS09125 (NCTC12696_01799) | spx | 1759173..1759571 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| DQM36_RS09130 (NCTC12696_01800) | recA | 1759862..1760998 (-) | 1137 | WP_002992179.1 | recombinase RecA | Machinery gene |
| DQM36_RS09135 (NCTC12696_01801) | cinA | 1761087..1762358 (-) | 1272 | WP_002992182.1 | competence/damage-inducible protein A | Machinery gene |
| DQM36_RS09140 (NCTC12696_01802) | - | 1762427..1762987 (-) | 561 | WP_002992183.1 | DNA-3-methyladenine glycosylase I | - |
| DQM36_RS09145 (NCTC12696_01803) | ruvA | 1762997..1763593 (-) | 597 | WP_038432673.1 | Holliday junction branch migration protein RuvA | - |
| DQM36_RS09150 (NCTC12696_01804) | - | 1763595..1764815 (-) | 1221 | WP_002992187.1 | MDR family MFS transporter | - |
| DQM36_RS09155 (NCTC12696_01805) | mutL | 1764826..1766808 (-) | 1983 | WP_002992189.1 | DNA mismatch repair endonuclease MutL | - |
| DQM36_RS09160 (NCTC12696_01806) | - | 1766903..1768054 (-) | 1152 | WP_003058754.1 | tyrosine-type recombinase/integrase | - |
| DQM36_RS09890 | - | 1768303..1768446 (+) | 144 | WP_011185066.1 | putative holin-like toxin | - |
| DQM36_RS09170 (NCTC12696_01808) | - | 1769295..1770062 (-) | 768 | WP_003058809.1 | helix-turn-helix transcriptional regulator | - |
| DQM36_RS09175 (NCTC12696_01809) | - | 1770216..1770422 (+) | 207 | WP_002992503.1 | helix-turn-helix transcriptional regulator | - |
| DQM36_RS09180 (NCTC12696_01810) | - | 1770456..1770656 (+) | 201 | WP_002992502.1 | helix-turn-helix domain-containing protein | - |
| DQM36_RS09185 (NCTC12696_01811) | - | 1770677..1771084 (+) | 408 | WP_002992501.1 | hypothetical protein | - |
| DQM36_RS09895 (NCTC12696_01812) | - | 1771097..1771219 (+) | 123 | WP_011285272.1 | hypothetical protein | - |
| DQM36_RS09190 (NCTC12696_01813) | - | 1771502..1772023 (+) | 522 | WP_002992498.1 | Rha family transcriptional regulator | - |
| DQM36_RS09195 (NCTC12696_01814) | - | 1772268..1772600 (+) | 333 | WP_002992497.1 | hypothetical protein | - |
| DQM36_RS09200 (NCTC12696_01815) | - | 1772600..1772791 (+) | 192 | WP_027968868.1 | hypothetical protein | - |
| DQM36_RS09205 (NCTC12696_01816) | - | 1772804..1773166 (+) | 363 | WP_000206026.1 | hypothetical protein | - |
| DQM36_RS09210 (NCTC12696_01817) | - | 1773163..1773492 (+) | 330 | WP_000174505.1 | hypothetical protein | - |
| DQM36_RS09215 (NCTC12696_01818) | - | 1773495..1773767 (+) | 273 | WP_001100459.1 | hypothetical protein | - |
| DQM36_RS09220 (NCTC12696_01819) | - | 1773768..1774625 (+) | 858 | WP_011185073.1 | primase alpha helix C-terminal domain-containing protein | - |
| DQM36_RS09225 (NCTC12696_01820) | - | 1774594..1776282 (+) | 1689 | WP_038432681.1 | DNA primase family protein | - |
| DQM36_RS09230 (NCTC12696_01821) | - | 1776569..1776742 (+) | 174 | WP_000694577.1 | hypothetical protein | - |
| DQM36_RS09675 | - | 1776748..1776921 (+) | 174 | WP_011185075.1 | hypothetical protein | - |
| DQM36_RS09235 (NCTC12696_01822) | - | 1776923..1777432 (+) | 510 | WP_011185076.1 | hypothetical protein | - |
| DQM36_RS09240 (NCTC12696_01823) | - | 1777507..1777995 (+) | 489 | WP_002992480.1 | hypothetical protein | - |
| DQM36_RS09250 (NCTC12696_01824) | - | 1778399..1778761 (+) | 363 | WP_002992136.1 | DUF1492 domain-containing protein | - |
| DQM36_RS09255 (NCTC12696_01825) | - | 1778736..1779119 (+) | 384 | WP_011185077.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40631.23 Da Isoelectric Point: 4.9004
>NTDB_id=1136994 DQM36_RS09130 WP_002992179.1 1759862..1760998(-) (recA) [Streptococcus pyogenes strain NCTC12696]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=1136994 DQM36_RS09130 WP_002992179.1 1759862..1760998(-) (recA) [Streptococcus pyogenes strain NCTC12696]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.