Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DQL31_RS09605 | Genome accession | NZ_LS483320 |
| Coordinates | 1835039..1836175 (-) | Length | 378 a.a. |
| NCBI ID | WP_111677538.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC5164 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1826542..1854240 | 1835039..1836175 | within | 0 |
Gene organization within MGE regions
Location: 1826542..1854240
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL31_RS09560 (NCTC5164_01909) | nrdG | 1826542..1827156 (-) | 615 | WP_002982219.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| DQL31_RS09565 (NCTC5164_01910) | - | 1827156..1827665 (-) | 510 | WP_111677535.1 | GNAT family N-acetyltransferase | - |
| DQL31_RS09570 (NCTC5164_01911) | - | 1827674..1828609 (-) | 936 | WP_111677536.1 | Gfo/Idh/MocA family protein | - |
| DQL31_RS10200 (NCTC5164_01912) | - | 1828638..1828784 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| DQL31_RS09575 (NCTC5164_01913) | nrdD | 1828966..1831164 (-) | 2199 | WP_002992831.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| DQL31_RS09580 (NCTC5164_01914) | - | 1831261..1832820 (-) | 1560 | WP_111677537.1 | DUF2079 domain-containing protein | - |
| DQL31_RS09585 (NCTC5164_01916) | - | 1833234..1833539 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| DQL31_RS09590 (NCTC5164_01917) | ruvX | 1833551..1833970 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| DQL31_RS09595 (NCTC5164_01918) | - | 1833967..1834236 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| DQL31_RS09600 (NCTC5164_01919) | spx | 1834350..1834748 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| DQL31_RS09605 (NCTC5164_01920) | recA | 1835039..1836175 (-) | 1137 | WP_111677538.1 | recombinase RecA | Machinery gene |
| DQL31_RS09610 (NCTC5164_01921) | cinA | 1836264..1837535 (-) | 1272 | WP_111677539.1 | competence/damage-inducible protein A | Machinery gene |
| DQL31_RS09615 (NCTC5164_01922) | - | 1837604..1838164 (-) | 561 | WP_011018314.1 | DNA-3-methyladenine glycosylase I | - |
| DQL31_RS09620 (NCTC5164_01923) | ruvA | 1838174..1838770 (-) | 597 | WP_111677540.1 | Holliday junction branch migration protein RuvA | - |
| DQL31_RS09625 (NCTC5164_01924) | - | 1838772..1839992 (-) | 1221 | WP_002982178.1 | MDR family MFS transporter | - |
| DQL31_RS09630 (NCTC5164_01925) | mutL | 1840003..1841985 (-) | 1983 | WP_111677601.1 | DNA mismatch repair endonuclease MutL | - |
| DQL31_RS09635 (NCTC5164_01926) | - | 1842080..1843225 (-) | 1146 | WP_021775554.1 | tyrosine-type recombinase/integrase | - |
| DQL31_RS09645 (NCTC5164_01927) | - | 1843858..1844685 (-) | 828 | WP_014411910.1 | hypothetical protein | - |
| DQL31_RS10205 | - | 1844717..1844866 (+) | 150 | WP_154079230.1 | hypothetical protein | - |
| DQL31_RS09650 (NCTC5164_01928) | - | 1845092..1845883 (-) | 792 | WP_014411911.1 | helix-turn-helix domain-containing protein | - |
| DQL31_RS09655 (NCTC5164_01929) | - | 1846038..1846208 (+) | 171 | WP_032467166.1 | helix-turn-helix transcriptional regulator | - |
| DQL31_RS09660 (NCTC5164_01930) | - | 1846263..1846670 (+) | 408 | WP_002992501.1 | hypothetical protein | - |
| DQL31_RS09665 (NCTC5164_01931) | - | 1846684..1847301 (+) | 618 | WP_111677541.1 | Rha family transcriptional regulator | - |
| DQL31_RS09670 (NCTC5164_01932) | - | 1847535..1847876 (+) | 342 | WP_023611295.1 | hypothetical protein | - |
| DQL31_RS09675 (NCTC5164_01933) | - | 1847863..1848084 (+) | 222 | WP_023611263.1 | hypothetical protein | - |
| DQL31_RS09680 (NCTC5164_01934) | - | 1848087..1848278 (+) | 192 | WP_010922764.1 | hypothetical protein | - |
| DQL31_RS09685 (NCTC5164_01935) | - | 1848290..1848619 (+) | 330 | WP_003058810.1 | hypothetical protein | - |
| DQL31_RS09690 (NCTC5164_01936) | - | 1848622..1848894 (+) | 273 | WP_001100459.1 | hypothetical protein | - |
| DQL31_RS09695 (NCTC5164_01937) | - | 1848895..1849752 (+) | 858 | WP_010922767.1 | primase alpha helix C-terminal domain-containing protein | - |
| DQL31_RS09700 (NCTC5164_01938) | - | 1849721..1851409 (+) | 1689 | WP_002992487.1 | DNA primase family protein | - |
| DQL31_RS09705 (NCTC5164_01939) | - | 1851696..1851869 (+) | 174 | WP_000694577.1 | hypothetical protein | - |
| DQL31_RS10210 (NCTC5164_01940) | - | 1851875..1852048 (+) | 174 | WP_014407944.1 | hypothetical protein | - |
| DQL31_RS09710 (NCTC5164_01941) | - | 1852050..1852559 (+) | 510 | WP_023611171.1 | hypothetical protein | - |
| DQL31_RS09715 (NCTC5164_01942) | - | 1852633..1853121 (+) | 489 | WP_002992480.1 | hypothetical protein | - |
| DQL31_RS09720 (NCTC5164_01943) | - | 1853520..1853882 (+) | 363 | WP_032461242.1 | DUF1492 domain-containing protein | - |
| DQL31_RS09725 (NCTC5164_01944) | - | 1853857..1854240 (+) | 384 | WP_111677542.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40622.18 Da Isoelectric Point: 4.8451
>NTDB_id=1136330 DQL31_RS09605 WP_111677538.1 1835039..1836175(-) (recA) [Streptococcus pyogenes strain NCTC5164]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHSELFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHSELFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=1136330 DQL31_RS09605 WP_111677538.1 1835039..1836175(-) (recA) [Streptococcus pyogenes strain NCTC5164]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCACCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATTCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCACCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATTCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.