Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | EL075_RS07305 | Genome accession | NZ_LR134244 |
| Coordinates | 1519357..1520403 (-) | Length | 348 a.a. |
| NCBI ID | WP_002451246.1 | Uniprot ID | A0A2T4Q2T6 |
| Organism | Staphylococcus warneri strain NCTC7291 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1516533..1590482 | 1519357..1520403 | within | 0 |
Gene organization within MGE regions
Location: 1516533..1590482
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL075_RS07295 (NCTC7291_01501) | - | 1517014..1517229 (+) | 216 | WP_002467042.1 | hypothetical protein | - |
| EL075_RS07300 (NCTC7291_01502) | rny | 1517351..1518910 (-) | 1560 | WP_126403206.1 | ribonuclease Y | - |
| EL075_RS07305 (NCTC7291_01503) | recA | 1519357..1520403 (-) | 1047 | WP_002451246.1 | recombinase RecA | Machinery gene |
| EL075_RS07310 (NCTC7291_01504) | - | 1520570..1521721 (-) | 1152 | WP_002465812.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| EL075_RS07315 (NCTC7291_01505) | pgsA | 1521894..1522469 (-) | 576 | WP_015365063.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| EL075_RS07320 (NCTC7291_01506) | - | 1522500..1522892 (-) | 393 | WP_002465806.1 | helix-turn-helix domain-containing protein | - |
| EL075_RS07325 (NCTC7291_01507) | - | 1522913..1523749 (-) | 837 | WP_015365064.1 | YmfK family protein | - |
| EL075_RS07330 (NCTC7291_01508) | ymfI | 1523884..1524588 (-) | 705 | WP_002465810.1 | elongation factor P 5-aminopentanone reductase | - |
| EL075_RS07335 (NCTC7291_01509) | yfmH | 1524585..1525874 (-) | 1290 | WP_015365066.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| EL075_RS07340 (NCTC7291_01510) | yfmF | 1525874..1527160 (-) | 1287 | WP_037539758.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| EL075_RS07345 (NCTC7291_01511) | - | 1527173..1527886 (-) | 714 | WP_015365067.1 | GntR family transcriptional regulator | - |
| EL075_RS12180 | - | 1527889..1529340 (-) | 1452 | Protein_1417 | DNA translocase FtsK | - |
| EL075_RS12185 | - | 1529452..1530285 (-) | 834 | Protein_1418 | cell division protein FtsK | - |
| EL075_RS07355 (NCTC7291_01513) | rnjB | 1530525..1532198 (-) | 1674 | WP_015365069.1 | ribonuclease J2 | - |
| EL075_RS07365 | pnp | 1532385..1534484 (-) | 2100 | WP_002466036.1 | polyribonucleotide nucleotidyltransferase | - |
| EL075_RS07370 (NCTC7291_01516) | rpsO | 1534620..1534889 (-) | 270 | WP_002450539.1 | 30S ribosomal protein S15 | - |
| EL075_RS07375 (NCTC7291_01517) | ribF | 1535003..1535974 (-) | 972 | WP_126403207.1 | riboflavin biosynthesis protein RibF | - |
| EL075_RS07380 (NCTC7291_01518) | truB | 1535987..1536904 (-) | 918 | WP_002466042.1 | tRNA pseudouridine(55) synthase TruB | - |
| EL075_RS07385 (NCTC7291_01519) | rbfA | 1537057..1537407 (-) | 351 | WP_002466047.1 | 30S ribosome-binding factor RbfA | - |
| EL075_RS07390 (NCTC7291_01520) | infB | 1537547..1539712 (-) | 2166 | WP_015365072.1 | translation initiation factor IF-2 | - |
| EL075_RS07395 (NCTC7291_01521) | - | 1539717..1540034 (-) | 318 | WP_002466040.1 | L7Ae/L30e/S12e/Gadd45 family ribosomal protein | - |
| EL075_RS07400 (NCTC7291_01522) | rnpM | 1540031..1540318 (-) | 288 | WP_002450545.1 | RNase P modulator RnpM | - |
| EL075_RS07405 (NCTC7291_01523) | nusA | 1540338..1541570 (-) | 1233 | WP_126403208.1 | transcription termination factor NusA | - |
| EL075_RS07410 (NCTC7291_01524) | rimP | 1541591..1542058 (-) | 468 | WP_015365074.1 | ribosome maturation factor RimP | - |
| EL075_RS07415 (NCTC7291_01525) | - | 1542241..1546551 (-) | 4311 | WP_126403437.1 | PolC-type DNA polymerase III | - |
| EL075_RS07420 (NCTC7291_01526) | - | 1546819..1548522 (-) | 1704 | WP_002466052.1 | proline--tRNA ligase | - |
| EL075_RS07425 (NCTC7291_01527) | rseP | 1548542..1549828 (-) | 1287 | WP_126403209.1 | RIP metalloprotease RseP | - |
| EL075_RS07430 (NCTC7291_01528) | - | 1550071..1550853 (-) | 783 | WP_002466065.1 | phosphatidate cytidylyltransferase | - |
| EL075_RS07435 (NCTC7291_01529) | - | 1550857..1551627 (-) | 771 | WP_002466060.1 | isoprenyl transferase | - |
| EL075_RS07440 (NCTC7291_01530) | frr | 1551860..1552414 (-) | 555 | WP_002450553.1 | ribosome recycling factor | - |
| EL075_RS07445 (NCTC7291_01531) | pyrH | 1552430..1553152 (-) | 723 | WP_002450554.1 | UMP kinase | - |
| EL075_RS07450 (NCTC7291_01532) | tsf | 1553293..1554171 (-) | 879 | WP_126403210.1 | translation elongation factor Ts | - |
| EL075_RS07455 (NCTC7291_01533) | rpsB | 1554323..1555111 (-) | 789 | WP_002466032.1 | 30S ribosomal protein S2 | - |
| EL075_RS07460 (NCTC7291_01534) | codY | 1555418..1556191 (-) | 774 | WP_002450557.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| EL075_RS07465 (NCTC7291_01535) | hslU | 1556215..1557618 (-) | 1404 | WP_015365077.1 | ATP-dependent protease ATPase subunit HslU | - |
| EL075_RS07470 (NCTC7291_01536) | hslV | 1557707..1558252 (-) | 546 | WP_002450559.1 | ATP-dependent protease subunit HslV | - |
| EL075_RS07475 (NCTC7291_01537) | xerC | 1558249..1559142 (-) | 894 | WP_126403211.1 | tyrosine recombinase XerC | - |
| EL075_RS07480 (NCTC7291_01538) | trmFO | 1559307..1560614 (-) | 1308 | WP_002466058.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| EL075_RS07485 (NCTC7291_01539) | topA | 1560731..1562806 (-) | 2076 | WP_026088907.1 | type I DNA topoisomerase | - |
| EL075_RS07490 (NCTC7291_01540) | dprA | 1562984..1563859 (-) | 876 | WP_373364739.1 | DNA-processing protein DprA | Machinery gene |
| EL075_RS07495 (NCTC7291_01541) | sucD | 1564094..1564999 (-) | 906 | WP_002466045.1 | succinate--CoA ligase subunit alpha | - |
| EL075_RS07500 (NCTC7291_01542) | sucC | 1565021..1566187 (-) | 1167 | WP_002466034.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| EL075_RS07505 (NCTC7291_01543) | - | 1566295..1567065 (-) | 771 | WP_002466053.1 | ribonuclease HII | - |
| EL075_RS07510 (NCTC7291_01544) | ylqF | 1567058..1567933 (-) | 876 | WP_002466050.1 | ribosome biogenesis GTPase YlqF | - |
| EL075_RS07515 (NCTC7291_01545) | - | 1568233..1570833 (+) | 2601 | WP_126403212.1 | YfhO family protein | - |
| EL075_RS07520 (NCTC7291_01546) | - | 1570826..1573435 (+) | 2610 | WP_019235877.1 | YfhO family protein | - |
| EL075_RS07525 (NCTC7291_01547) | rplS | 1573601..1573951 (-) | 351 | WP_002450570.1 | 50S ribosomal protein L19 | - |
| EL075_RS07530 (NCTC7291_01548) | trmD | 1574057..1574794 (-) | 738 | WP_002466037.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| EL075_RS07535 (NCTC7291_01549) | rimM | 1574794..1575297 (-) | 504 | WP_002466057.1 | ribosome maturation factor RimM | - |
| EL075_RS07540 (NCTC7291_01550) | rpsP | 1575465..1575740 (-) | 276 | WP_002466054.1 | 30S ribosomal protein S16 | - |
| EL075_RS07545 (NCTC7291_01551) | ffh | 1576272..1577639 (-) | 1368 | WP_002450574.1 | signal recognition particle protein | - |
| EL075_RS07550 (NCTC7291_01552) | - | 1577664..1577996 (-) | 333 | WP_002466066.1 | putative DNA-binding protein | - |
| EL075_RS07555 (NCTC7291_01553) | ftsY | 1577983..1579227 (-) | 1245 | WP_002466030.1 | signal recognition particle-docking protein FtsY | - |
| EL075_RS07560 (NCTC7291_01554) | smc | 1579224..1582793 (-) | 3570 | WP_015365084.1 | chromosome segregation protein SMC | - |
| EL075_RS07565 (NCTC7291_01555) | rnc | 1582946..1583674 (-) | 729 | WP_015365085.1 | ribonuclease III | - |
| EL075_RS07570 (NCTC7291_01556) | - | 1583785..1584018 (-) | 234 | WP_001830184.1 | acyl carrier protein | - |
| EL075_RS07575 (NCTC7291_01557) | fabG | 1584231..1584965 (-) | 735 | WP_015365086.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| EL075_RS07580 (NCTC7291_01558) | fabD | 1584965..1585885 (-) | 921 | WP_002466912.1 | ACP S-malonyltransferase | - |
| EL075_RS07585 (NCTC7291_01559) | plsX | 1585878..1586864 (-) | 987 | WP_015365088.1 | phosphate acyltransferase PlsX | - |
| EL075_RS07590 (NCTC7291_01560) | fapR | 1586857..1587426 (-) | 570 | WP_002466907.1 | transcription factor FapR | - |
| EL075_RS07595 (NCTC7291_01561) | recG | 1587576..1589624 (-) | 2049 | WP_002466919.1 | ATP-dependent DNA helicase RecG | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 37828.74 Da Isoelectric Point: 5.0133
>NTDB_id=1119373 EL075_RS07305 WP_002451246.1 1519357..1520403(-) (recA) [Staphylococcus warneri strain NCTC7291]
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSTSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
ETQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENEIVDKSGAWYSYNGERMGQGKENVKTYLKENPQIKDEIDQ
KLREKLGIFDGDVEEKEEDAPKSLFDEE
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSTSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
ETQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENEIVDKSGAWYSYNGERMGQGKENVKTYLKENPQIKDEIDQ
KLREKLGIFDGDVEEKEEDAPKSLFDEE
Nucleotide
Download Length: 1047 bp
>NTDB_id=1119373 EL075_RS07305 WP_002451246.1 1519357..1520403(-) (recA) [Staphylococcus warneri strain NCTC7291]
TTGGATAACGAACGTCAAAAAGCTCTCGATACAGTAATAAAAAATATGGAAAAATCATTTGGTAAAGGTGCAGTAATGAA
ATTAGGCGATAATAAAGGTCGCAGAGTTTCAAGTACATCAAGTGGTTCAGTTACATTAGATAACGCATTAGGTGTAGGTG
GCTATCCTAAAGGAAGAATTATTGAAATATATGGACCAGAAAGTTCTGGTAAAACTACAGTTGCATTACACGCTATTGCA
GAAACACAAAAAAACGGTGGCGTTGCTGCATTTATTGATGCTGAGCATGCATTAGATCCTGTTTATGCTCAAGCACTAGG
TGTAGATATTGATAATCTATATTTATCACAACCTGATCATGGGGAACAAGGTTTAGAGATTGCTGAAGCTTTTGTTCGTA
GTGGTGCAGTCGATATCGTAGTAGTCGATTCAGTAGCTGCATTAACACCTAAAGCTGAAATTGAAGGTGAAATGGGAGAT
ACTCATGTTGGTTTGCAAGCAAGATTAATGTCACAAGCATTACGTAAACTATCTGGAGCTATTTCCAAATCAAATACGAC
TGCCATCTTCATTAACCAAATTCGTGAAAAAGTAGGTGTGATGTTCGGTAACCCTGAAACAACACCAGGCGGTAGAGCAT
TAAAATTCTATAGTTCTGTTCGTTTAGAAGTTCGTCGTGCTGAACAATTGAAACAAGGACAAGAGATTGTTGGTAATAGA
ACTAAGATTAAAGTAGTTAAAAACAAAGTTGCACCACCATTCAGAGTTGCAGAAGTTGATATCATGTATGGTCAAGGTAT
CTCTAAAGAAGGCGAACTGATTGATCTTGGTGTTGAAAATGAAATCGTTGATAAATCTGGAGCTTGGTATTCATATAATG
GTGAAAGAATGGGACAAGGTAAAGAAAACGTTAAAACTTACCTTAAAGAAAATCCTCAAATTAAAGATGAAATCGATCAA
AAACTACGTGAGAAGCTCGGTATTTTTGATGGTGATGTAGAAGAAAAAGAAGAAGACGCACCGAAGTCATTATTTGATGA
AGAATAA
TTGGATAACGAACGTCAAAAAGCTCTCGATACAGTAATAAAAAATATGGAAAAATCATTTGGTAAAGGTGCAGTAATGAA
ATTAGGCGATAATAAAGGTCGCAGAGTTTCAAGTACATCAAGTGGTTCAGTTACATTAGATAACGCATTAGGTGTAGGTG
GCTATCCTAAAGGAAGAATTATTGAAATATATGGACCAGAAAGTTCTGGTAAAACTACAGTTGCATTACACGCTATTGCA
GAAACACAAAAAAACGGTGGCGTTGCTGCATTTATTGATGCTGAGCATGCATTAGATCCTGTTTATGCTCAAGCACTAGG
TGTAGATATTGATAATCTATATTTATCACAACCTGATCATGGGGAACAAGGTTTAGAGATTGCTGAAGCTTTTGTTCGTA
GTGGTGCAGTCGATATCGTAGTAGTCGATTCAGTAGCTGCATTAACACCTAAAGCTGAAATTGAAGGTGAAATGGGAGAT
ACTCATGTTGGTTTGCAAGCAAGATTAATGTCACAAGCATTACGTAAACTATCTGGAGCTATTTCCAAATCAAATACGAC
TGCCATCTTCATTAACCAAATTCGTGAAAAAGTAGGTGTGATGTTCGGTAACCCTGAAACAACACCAGGCGGTAGAGCAT
TAAAATTCTATAGTTCTGTTCGTTTAGAAGTTCGTCGTGCTGAACAATTGAAACAAGGACAAGAGATTGTTGGTAATAGA
ACTAAGATTAAAGTAGTTAAAAACAAAGTTGCACCACCATTCAGAGTTGCAGAAGTTGATATCATGTATGGTCAAGGTAT
CTCTAAAGAAGGCGAACTGATTGATCTTGGTGTTGAAAATGAAATCGTTGATAAATCTGGAGCTTGGTATTCATATAATG
GTGAAAGAATGGGACAAGGTAAAGAAAACGTTAAAACTTACCTTAAAGAAAATCCTCAAATTAAAGATGAAATCGATCAA
AAACTACGTGAGAAGCTCGGTATTTTTGATGGTGATGTAGAAGAAAAAGAAGAAGACGCACCGAAGTCATTATTTGATGA
AGAATAA
Similar proteins
Only experimentally validated proteins are listed.