Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   BLEG1_RS10510 Genome accession   NZ_CP003923
Coordinates   2136907..2137956 (-) Length   349 a.a.
NCBI ID   WP_038480594.1    Uniprot ID   A0A060LYB0
Organism   Shouchella lehensis G1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2131907..2142956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLEG1_RS10490 (BleG1_2183) - 2133490..2134152 (-) 663 WP_038480585.1 ATPase -
  BLEG1_RS10495 (BleG1_2184) - 2134145..2134396 (-) 252 WP_038480588.1 hypothetical protein -
  BLEG1_RS10500 (BleG1_2185) - 2134393..2135826 (-) 1434 WP_038480591.1 AAA family ATPase -
  BLEG1_RS10505 (BleG1_2186) - 2135813..2136802 (-) 990 WP_051667539.1 metallophosphoesterase -
  BLEG1_RS10510 (BleG1_2187) recA 2136907..2137956 (-) 1050 WP_038480594.1 recombinase RecA Machinery gene
  BLEG1_RS10515 (BleG1_2188) - 2138144..2139760 (-) 1617 WP_038480597.1 DEAD/DEAH box helicase -
  BLEG1_RS10520 (BleG1_2189) cinA 2139757..2141010 (-) 1254 WP_038480600.1 competence/damage-inducible protein A Machinery gene
  BLEG1_RS10525 (BleG1_2190) pgsA 2141022..2141600 (-) 579 WP_035397270.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BLEG1_RS10530 (BleG1_2191) - 2141720..2142616 (-) 897 WP_051667540.1 RodZ family helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 349 a.a.        Molecular weight: 37915.14 Da        Isoelectric Point: 5.1129

>NTDB_id=111849 BLEG1_RS10510 WP_038480594.1 2136907..2137956(-) (recA) [Shouchella lehensis G1]
MSDRKQALDMALRQIEKQFGKGSVMKLGERAEQRISTVSSGALALDIALGVGGYPKGRIIEVYGPESSGKTTVALHAIAE
VQRQGGQAAFIDAEHALDPVYAGKLGVNVDELLLSQPDTGEQALEIAEALVRSGALDMIVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTVAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEALKQGNDIVGNRT
KIKVVKNKVAPPFRLAEVDIMYGEGISREGSILDIATDLEIVDKSGAWYSYNGDRLGQGRENSKQFLKENVEITTEIERK
IRDEHNLDGEAKVEEADKESFEDVPLDLK

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=111849 BLEG1_RS10510 WP_038480594.1 2136907..2137956(-) (recA) [Shouchella lehensis G1]
ATGAGTGATCGGAAACAAGCGTTAGATATGGCTTTGCGCCAGATCGAAAAGCAGTTTGGTAAAGGTTCTGTCATGAAATT
AGGAGAGAGAGCGGAGCAACGAATCTCAACTGTTTCAAGTGGTGCGCTAGCTTTAGATATTGCTTTAGGTGTTGGCGGCT
ATCCAAAAGGTAGAATCATTGAAGTCTACGGACCAGAGTCTTCTGGTAAAACGACAGTTGCTCTTCACGCTATTGCTGAA
GTACAGCGTCAAGGTGGTCAAGCTGCATTTATTGATGCAGAGCACGCGTTAGACCCCGTTTATGCTGGTAAGCTTGGTGT
AAATGTAGACGAATTGCTTCTTTCTCAACCTGACACAGGGGAGCAAGCATTAGAAATTGCTGAAGCGCTTGTACGTAGTG
GTGCTCTGGATATGATCGTTATTGATAGTGTGGCTGCTCTTGTTCCAAAAGCGGAGATTGAAGGCGAAATGGGAGATTCT
CACGTCGGTTTGCAAGCTCGTTTAATGTCTCAAGCGTTAAGAAAATTATCTGGTGCGATTAATAAATCGAAAACCGTAGC
GGTCTTTATTAATCAGATTCGTGAAAAGGTCGGCGTGATGTTCGGTAATCCTGAAACAACACCAGGTGGTCGTGCGCTTA
AGTTCTATTCTTCTGTTCGTTTAGAAGTTCGACGAGCTGAGGCACTGAAACAAGGAAACGATATAGTCGGAAACCGTACT
AAAATTAAAGTTGTGAAAAACAAAGTGGCGCCTCCATTCCGTCTTGCTGAAGTGGATATTATGTATGGAGAAGGAATTTC
AAGAGAGGGATCTATTCTTGATATTGCTACGGATTTAGAAATTGTTGATAAGAGTGGTGCCTGGTATTCTTACAACGGTG
ATCGTTTAGGTCAAGGTCGTGAGAACTCGAAACAATTCTTAAAAGAAAACGTAGAAATTACAACTGAAATCGAACGGAAA
ATCCGTGATGAGCACAATCTTGATGGAGAAGCAAAAGTAGAAGAAGCCGATAAAGAATCTTTTGAAGATGTTCCTCTTGA
TTTAAAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(6-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060LYB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

82.583

95.415

0.788
  recA Streptococcus pneumoniae D39

65.47

100

0.679
  recA Streptococcus pneumoniae Rx1

65.47

100

0.679
  recA Streptococcus pneumoniae R6

65.47

100

0.679
  recA Streptococcus pneumoniae TIGR4

65.47

100

0.679
  recA Latilactobacillus sakei subsp. sakei 23K

68.497

99.14

0.679
  recA Streptococcus mitis NCTC 12261

65.642

100

0.673
  recA Streptococcus mitis SK321

65.363

100

0.67
  recA Streptococcus mutans UA159

68.546

96.562

0.662
  recA Streptococcus pyogenes NZ131

69.444

92.837

0.645
  recA Lactococcus lactis subsp. cremoris KW2

67.273

94.556

0.636
  recA Neisseria gonorrhoeae MS11

66.355

91.977

0.61
  recA Neisseria gonorrhoeae MS11

66.355

91.977

0.61
  recA Neisseria gonorrhoeae strain FA1090

66.355

91.977

0.61
  recA Ralstonia pseudosolanacearum GMI1000

67.203

89.112

0.599
  recA Pseudomonas stutzeri DSM 10701

65.312

91.691

0.599
  recA Glaesserella parasuis strain SC1401

65

91.691

0.596
  recA Acinetobacter baylyi ADP1

64

93.123

0.596
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.721

96.562

0.596
  recA Vibrio cholerae O1 biovar El Tor strain E7946

64.174

91.977

0.59
  recA Vibrio cholerae strain A1552

64.174

91.977

0.59
  recA Acinetobacter baumannii D1279779

63.665

92.264

0.587
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.585

93.983

0.579
  recA Helicobacter pylori strain NCTC11637

62.422

92.264

0.576
  recA Helicobacter pylori 26695

62.112

92.264

0.573
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

59.938

92.264

0.553

Multiple sequence alignment