Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BLEG1_RS10520 Genome accession   NZ_CP003923
Coordinates   2139757..2141010 (-) Length   417 a.a.
NCBI ID   WP_038480600.1    Uniprot ID   A0A060LX43
Organism   Shouchella lehensis G1     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2134757..2146010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLEG1_RS10505 (BleG1_2186) - 2135813..2136802 (-) 990 WP_051667539.1 metallophosphoesterase -
  BLEG1_RS10510 (BleG1_2187) recA 2136907..2137956 (-) 1050 WP_038480594.1 recombinase RecA Machinery gene
  BLEG1_RS10515 (BleG1_2188) - 2138144..2139760 (-) 1617 WP_038480597.1 DEAD/DEAH box helicase -
  BLEG1_RS10520 (BleG1_2189) cinA 2139757..2141010 (-) 1254 WP_038480600.1 competence/damage-inducible protein A Machinery gene
  BLEG1_RS10525 (BleG1_2190) pgsA 2141022..2141600 (-) 579 WP_035397270.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BLEG1_RS10530 (BleG1_2191) - 2141720..2142616 (-) 897 WP_051667540.1 RodZ family helix-turn-helix domain-containing protein -
  BLEG1_RS10535 (BleG1_2192) - 2142638..2143405 (-) 768 WP_038480602.1 YmfK family protein -
  BLEG1_RS10540 (BleG1_2193) - 2143564..2143812 (-) 249 WP_038480605.1 DUF3243 domain-containing protein -
  BLEG1_RS10545 (BleG1_2194) ymfI 2143883..2144596 (-) 714 WP_038480608.1 elongation factor P 5-aminopentanone reductase -
  BLEG1_RS10550 (BleG1_2195) yfmH 2144593..2145888 (-) 1296 WP_038480611.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 417 a.a.        Molecular weight: 45547.81 Da        Isoelectric Point: 4.8077

>NTDB_id=111850 BLEG1_RS10520 WP_038480600.1 2139757..2141010(-) (cinA) [Shouchella lehensis G1]
MNAEIIAVGSELLLGQIANTNGQYISKQLASVGVDVYSHTVVGDNEDRLFKTISEGFARADLLILTGGLGPTKDDLTKDT
VAKFCERKLVYDQEALDHIEAYFKRHNRTMTPNNKKQAYVIEGAHVLANRHGMAPGMVVQLANEKRIVLLPGPPSEMKPM
FEKELLPFLLGANDQASITSRVLHFFGIGESQLETDLEDIIENQQNPTIAPLASDGEVKLRLTVKHTDENEIKRLLDETE
SVIMDRVGDYLYGYDETTLVKEVSRYLDEQGLTVACAESFTGGLFASELVSLPGASSILTGSITAYTEEAKTALLGVSQK
TLQDHGVVSEACAAEMAQGIQERLQTDVAISFTGVAGPEKQGDLEPGTVVIGIVFPQQPVRTIPLSLSGGRNAVRMRAVK
YGFFYLLDELKRRNGSK

Nucleotide


Download         Length: 1254 bp        

>NTDB_id=111850 BLEG1_RS10520 WP_038480600.1 2139757..2141010(-) (cinA) [Shouchella lehensis G1]
ATGAATGCGGAAATCATTGCAGTTGGTTCAGAGTTGTTGCTTGGCCAAATTGCCAACACAAACGGCCAATACATTTCAAA
GCAACTTGCAAGTGTTGGTGTTGACGTTTATTCACATACAGTGGTTGGTGATAATGAAGACCGGCTATTTAAAACGATCA
GTGAAGGATTTGCTCGTGCAGATTTGCTTATTTTAACAGGCGGGTTAGGCCCGACTAAAGATGATTTAACAAAAGATACG
GTGGCAAAGTTTTGTGAACGAAAGCTTGTGTATGACCAAGAGGCCCTTGATCATATTGAAGCATACTTTAAACGACACAA
TCGGACGATGACGCCAAATAATAAAAAGCAAGCATATGTTATAGAAGGTGCTCATGTTCTCGCCAATCGCCACGGAATGG
CACCTGGAATGGTTGTTCAGCTAGCTAACGAAAAGCGAATTGTTCTATTGCCTGGGCCGCCAAGTGAAATGAAGCCTATG
TTTGAAAAAGAGCTTTTACCTTTTTTGTTAGGAGCAAACGATCAAGCGTCAATTACGTCGCGGGTACTTCATTTTTTCGG
TATTGGTGAATCCCAACTTGAAACCGATCTGGAGGATATTATTGAAAACCAACAAAACCCGACAATTGCACCGCTTGCAA
GTGACGGTGAAGTGAAGTTAAGGCTGACGGTGAAACATACAGATGAAAATGAAATTAAGCGATTGCTTGATGAAACAGAG
TCAGTCATTATGGATCGTGTAGGGGATTATCTTTACGGCTATGATGAAACAACGCTTGTTAAAGAAGTGTCTCGCTACTT
AGATGAGCAAGGGCTTACTGTTGCCTGTGCAGAAAGCTTTACAGGTGGATTATTTGCCAGTGAACTCGTATCTTTGCCAG
GTGCATCATCGATCTTGACAGGGAGTATTACAGCCTATACAGAGGAAGCTAAGACTGCTTTGCTCGGTGTATCTCAAAAA
ACCCTCCAAGATCATGGGGTAGTAAGTGAAGCATGTGCAGCTGAAATGGCTCAAGGAATTCAAGAAAGGTTACAAACCGA
TGTAGCCATCTCGTTTACCGGGGTAGCAGGACCTGAAAAGCAAGGAGATTTAGAGCCAGGTACGGTTGTCATTGGCATTG
TCTTTCCACAACAACCTGTACGAACCATTCCACTCTCATTATCTGGTGGGAGAAATGCTGTGCGAATGCGTGCGGTTAAA
TACGGATTTTTCTATTTGTTGGACGAATTAAAAAGGAGAAATGGTAGTAAATGA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Competence-damaged protein (CinA)

(257-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060LX43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

56.145

99.52

0.559
  cinA Streptococcus mutans UA159

46.098

98.321

0.453
  cinA Streptococcus pneumoniae TIGR4

45.763

99.041

0.453
  cinA Streptococcus pneumoniae Rx1

45.521

99.041

0.451
  cinA Streptococcus pneumoniae R6

45.521

99.041

0.451
  cinA Streptococcus mitis NCTC 12261

45.278

99.041

0.448
  cinA Streptococcus pneumoniae D39

45.278

99.041

0.448
  cinA Streptococcus mitis SK321

45.036

99.041

0.446
  cinA Streptococcus suis isolate S10

42.234

88.01

0.372

Multiple sequence alignment