Detailed information NTG0111802

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: MY04_RS21175
• Genome accession: NZ_CP003561
• Coordinates: 264372..264482 (+)
• Length: 36 a.a.
• NCBI ID: WP_084006043.1
• Uniprot ID: -
• Organism: Flammeovirga sp. MY04
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 259372..269482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MY04_RS21170 (MY04_4208)	-	260291..263590 (-)	3300	WP_158297821.1	carboxypeptidase regulatory-like domain-containing protein	-
MY04_RS21175 (MY04_4210)	comGC/cglC	264372..264482 (+)	111	WP_084006043.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
MY04_RS21180 (MY04_4211)	-	264573..266261 (+)	1689	WP_066213994.1	AAA family ATPase	-
MY04_RS21185 (MY04_05540)	-	266258..266548 (-)	291	WP_066213997.1	Txe/YoeB family addiction module toxin	-
MY04_RS21190 (MY04_4213)	-	266520..266777 (-)	258	WP_066214000.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
MY04_RS21195 (MY04_4214)	-	266924..268474 (-)	1551	WP_066214003.1	arylsulfatase	-

Sequence

Protein

• Length: 36 a.a.
• Molecular weight: 3963.02 Da
• Isoelectric Point: 10.3320

>NTDB_id=111802 MY04_RS21175 WP_084006043.1 264372..264482(+) (comGC/cglC) [Flammeovirga sp. MY04]
MKNCKKNLKAFTLQELLVVLVIVGVLVLLALPNLTL

Nucleotide

• Length: 111 bp

>NTDB_id=111802 MY04_RS21175 WP_084006043.1 264372..264482(+) (comGC/cglC) [Flammeovirga sp. MY04]
ATGAAAAATTGTAAGAAAAATCTAAAGGCCTTCACCCTCCAAGAACTTCTAGTAGTGCTTGTCATCGTTGGCGTATTGGT
ATTATTAGCATTACCAAACTTAACGCTTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	55.556	100	0.556
comYC	Streptococcus mutans UA159	55.556	100	0.556
comGC/cglC	Streptococcus pneumoniae D39	64.516	86.111	0.556
comGC/cglC	Streptococcus pneumoniae R6	64.516	86.111	0.556
comGC/cglC	Streptococcus pneumoniae TIGR4	64.516	86.111	0.556
comGC/cglC	Streptococcus pneumoniae Rx1	64.516	86.111	0.556
comGC	Lactococcus lactis subsp. cremoris KW2	57.576	91.667	0.528
comYC	Streptococcus gordonii str. Challis substr. CH1	67.857	77.778	0.528
pilA/pilA1	Synechocystis sp. PCC 6803	60	83.333	0.5
comGC	Latilactobacillus sakei subsp. sakei 23K	60	83.333	0.5
pilA	Vibrio parahaemolyticus RIMD 2210633	48.485	91.667	0.444
pilE	Legionella pneumophila strain ERS1305867	48.485	91.667	0.444
pilE	Legionella pneumophila str. Paris	48.485	91.667	0.444
comYC	Streptococcus suis isolate S10	55.172	80.556	0.444
pilA	Vibrio campbellii strain DS40M4	46.667	83.333	0.389
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	46.667	83.333	0.389
ctsG	Campylobacter jejuni subsp. jejuni 81-176	51.852	75	0.389
pilA	Ralstonia pseudosolanacearum GMI1000	50	77.778	0.389
pilE	Neisseria gonorrhoeae strain FA1090	58.333	66.667	0.389
pilE	Neisseria gonorrhoeae MS11	58.333	66.667	0.389
comYD	Streptococcus gordonii str. Challis substr. CH1	54.167	66.667	0.361
pilH	Neisseria gonorrhoeae MS11	40.625	88.889	0.361
pilA	Vibrio cholerae C6706	48.148	75	0.361
pilA	Vibrio cholerae strain A1552	48.148	75	0.361
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	48.148	75	0.361