Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACNJYY_RS09840 | Genome accession | NZ_CP182294 |
| Coordinates | 1814161..1815207 (+) | Length | 348 a.a. |
| NCBI ID | WP_416731554.1 | Uniprot ID | - |
| Organism | Fictibacillus sp. JL2B1089 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1791094..1842103 | 1814161..1815207 | within | 0 |
Gene organization within MGE regions
Location: 1791094..1842103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNJYY_RS09740 (ACNJYY_09740) | asd | 1791674..1792717 (+) | 1044 | WP_416731542.1 | aspartate-semialdehyde dehydrogenase | - |
| ACNJYY_RS09745 (ACNJYY_09745) | dapG | 1792739..1794004 (+) | 1266 | WP_191753585.1 | aspartate kinase | - |
| ACNJYY_RS09750 (ACNJYY_09750) | dapA | 1794017..1794886 (+) | 870 | WP_416731543.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| ACNJYY_RS09755 (ACNJYY_09755) | - | 1795370..1797037 (+) | 1668 | WP_144700688.1 | ribonuclease J | - |
| ACNJYY_RS09760 (ACNJYY_09760) | - | 1797131..1797871 (+) | 741 | WP_144700686.1 | ClpP family protease | - |
| ACNJYY_RS09765 (ACNJYY_09765) | - | 1797868..1798077 (+) | 210 | WP_416731544.1 | YlzJ-like family protein | - |
| ACNJYY_RS09770 (ACNJYY_09770) | - | 1798197..1800557 (+) | 2361 | WP_416731545.1 | DNA translocase FtsK | - |
| ACNJYY_RS09775 (ACNJYY_09775) | - | 1800754..1801479 (+) | 726 | WP_416731546.1 | GntR family transcriptional regulator | - |
| ACNJYY_RS09780 (ACNJYY_09780) | - | 1801570..1802637 (+) | 1068 | WP_416731547.1 | BMP family lipoprotein | - |
| ACNJYY_RS09785 (ACNJYY_09785) | - | 1802721..1804247 (+) | 1527 | WP_416731548.1 | ABC transporter ATP-binding protein | - |
| ACNJYY_RS09790 (ACNJYY_09790) | - | 1804237..1805289 (+) | 1053 | WP_066393810.1 | ABC transporter permease | - |
| ACNJYY_RS09795 (ACNJYY_09795) | - | 1805289..1806251 (+) | 963 | WP_197220803.1 | ABC transporter permease | - |
| ACNJYY_RS09800 (ACNJYY_09800) | yfmF | 1806535..1807833 (+) | 1299 | WP_416731838.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| ACNJYY_RS09805 (ACNJYY_09805) | yfmH | 1807814..1809103 (+) | 1290 | WP_416731549.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| ACNJYY_RS09810 (ACNJYY_09810) | ymfI | 1809163..1809888 (+) | 726 | WP_416731550.1 | elongation factor P 5-aminopentanone reductase | - |
| ACNJYY_RS09815 (ACNJYY_09815) | - | 1809958..1810215 (+) | 258 | WP_066393818.1 | DUF3243 domain-containing protein | - |
| ACNJYY_RS09820 (ACNJYY_09820) | - | 1810350..1811126 (+) | 777 | WP_416731551.1 | DUF3388 domain-containing protein | - |
| ACNJYY_RS09825 (ACNJYY_09825) | - | 1811145..1812017 (+) | 873 | WP_416731552.1 | RodZ domain-containing protein | - |
| ACNJYY_RS09830 (ACNJYY_09830) | pgsA | 1812060..1812638 (+) | 579 | WP_066393829.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ACNJYY_RS09835 (ACNJYY_09835) | cinA | 1812793..1814034 (+) | 1242 | WP_416731553.1 | competence/damage-inducible protein A | Machinery gene |
| ACNJYY_RS09840 (ACNJYY_09840) | recA | 1814161..1815207 (+) | 1047 | WP_416731554.1 | recombinase RecA | Machinery gene |
| ACNJYY_RS09845 (ACNJYY_09845) | rny | 1815673..1817238 (+) | 1566 | WP_066393834.1 | ribonuclease Y | - |
| ACNJYY_RS09850 (ACNJYY_09850) | spoVS | 1817582..1817842 (+) | 261 | WP_010193268.1 | stage V sporulation protein SpoVS | - |
| ACNJYY_RS09855 (ACNJYY_09855) | - | 1818198..1819940 (+) | 1743 | WP_416731555.1 | 2-oxoacid:acceptor oxidoreductase subunit alpha | - |
| ACNJYY_RS09860 (ACNJYY_09860) | - | 1819942..1820808 (+) | 867 | WP_137789604.1 | 2-oxoacid:ferredoxin oxidoreductase subunit beta | - |
| ACNJYY_RS09865 (ACNJYY_09865) | tdh | 1821118..1822158 (+) | 1041 | WP_416731556.1 | L-threonine 3-dehydrogenase | - |
| ACNJYY_RS09870 (ACNJYY_09870) | - | 1822183..1823358 (+) | 1176 | WP_416731839.1 | glycine C-acetyltransferase | - |
| ACNJYY_RS09875 (ACNJYY_09875) | miaB | 1823589..1825109 (+) | 1521 | WP_416731557.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| ACNJYY_RS09880 (ACNJYY_09880) | - | 1825109..1825543 (+) | 435 | WP_066393841.1 | RicAFT regulatory complex protein RicA family protein | - |
| ACNJYY_RS09885 (ACNJYY_09885) | cotE | 1826010..1826582 (+) | 573 | WP_137789601.1 | outer spore coat protein CotE | - |
| ACNJYY_RS09890 (ACNJYY_09890) | mutS | 1826686..1829277 (+) | 2592 | WP_416731558.1 | DNA mismatch repair protein MutS | - |
| ACNJYY_RS09895 (ACNJYY_09895) | mutL | 1829292..1831184 (+) | 1893 | WP_416731559.1 | DNA mismatch repair endonuclease MutL | - |
| ACNJYY_RS09900 (ACNJYY_09900) | miaA | 1831194..1832144 (+) | 951 | WP_416731560.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| ACNJYY_RS09905 (ACNJYY_09905) | hfq | 1832176..1832412 (+) | 237 | WP_066393852.1 | RNA chaperone Hfq | - |
| ACNJYY_RS09910 (ACNJYY_09910) | - | 1832490..1833470 (-) | 981 | WP_416731561.1 | tyrosine-type recombinase/integrase | - |
| ACNJYY_RS09915 (ACNJYY_09915) | - | 1833573..1834151 (+) | 579 | WP_416731562.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| ACNJYY_RS09920 (ACNJYY_09920) | - | 1834277..1834900 (-) | 624 | WP_416731563.1 | YitT family protein | - |
| ACNJYY_RS09925 (ACNJYY_09925) | spoVK | 1835175..1836128 (+) | 954 | WP_416731564.1 | stage V sporulation protein K | - |
| ACNJYY_RS09930 (ACNJYY_09930) | hflX | 1836168..1837424 (+) | 1257 | WP_416731565.1 | GTPase HflX | - |
| ACNJYY_RS09935 (ACNJYY_09935) | - | 1837426..1838697 (+) | 1272 | WP_416731566.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| ACNJYY_RS09940 (ACNJYY_09940) | - | 1838828..1839229 (+) | 402 | WP_066393870.1 | MerR family transcriptional regulator | - |
| ACNJYY_RS09945 (ACNJYY_09945) | glnA | 1839299..1840633 (+) | 1335 | WP_066393872.1 | type I glutamate--ammonia ligase | - |
| ACNJYY_RS09950 (ACNJYY_09950) | lexA | 1841127..1841741 (-) | 615 | WP_416731567.1 | transcriptional repressor LexA | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 37793.89 Da Isoelectric Point: 4.7782
>NTDB_id=1101018 ACNJYY_RS09840 WP_416731554.1 1814161..1815207(+) (recA) [Fictibacillus sp. JL2B1089]
MSDRKAALDMALRQIEKQFGKGSIMKLGEQTEQRISTVSSGSITLDIALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQRNGGQAAFIDAEHALDPEYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDILIIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDVVGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISYQGEILDIGSDIDIVQKSGAWYSYEGERLGQGRENSKQFLKENPEIASAIVAE
IRNYYQLEGKAAAEVEAPSLEEEFELTE
MSDRKAALDMALRQIEKQFGKGSIMKLGEQTEQRISTVSSGSITLDIALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQRNGGQAAFIDAEHALDPEYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDILIIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAVFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDVVGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISYQGEILDIGSDIDIVQKSGAWYSYEGERLGQGRENSKQFLKENPEIASAIVAE
IRNYYQLEGKAAAEVEAPSLEEEFELTE
Nucleotide
Download Length: 1047 bp
>NTDB_id=1101018 ACNJYY_RS09840 WP_416731554.1 1814161..1815207(+) (recA) [Fictibacillus sp. JL2B1089]
ATGAGCGATAGAAAAGCGGCTCTAGATATGGCTCTACGCCAAATTGAAAAGCAGTTCGGTAAAGGTTCCATCATGAAATT
GGGTGAACAAACGGAACAGCGAATTTCAACAGTTTCCAGTGGATCGATCACTTTGGATATCGCACTTGGAATCGGTGGTT
ATCCTCGCGGAAGAATTATCGAAGTATATGGTCCTGAATCATCAGGGAAAACAACCGTTGCCCTTCATGCTATTGCAGAA
GTACAACGTAATGGTGGACAGGCTGCATTCATCGATGCTGAGCATGCACTAGACCCTGAATATGCTCAAAAGCTAGGCGT
TAATATTGATGAACTCTTATTGTCTCAGCCAGATACAGGTGAACAAGCGCTAGAGATCGCTGAAGCTCTTGTAAGAAGTG
GAGCGGTAGATATTTTGATCATCGACTCCGTTGCTGCACTTGTTCCTAAAGCTGAGATCGAAGGGGAGATGGGTGACTCT
CACGTTGGTCTCCAAGCTCGTCTAATGTCTCAAGCACTTCGTAAACTTTCAGGTGCCATCAATAAATCGAAAACCATCGC
AGTATTCATCAACCAAATTCGTGAAAAAGTTGGCGTTATGTTCGGAAATCCTGAAACAACACCAGGGGGAAGAGCTTTAA
AATTCTATTCATCTGTTCGTCTGGAAGTTCGTCGTGCTGAACAGCTGAAACAAGGACAAGACGTTGTTGGTAATAAAACA
AAAATTAAAGTCGTAAAAAATAAAGTAGCTCCTCCGTTTAGAACGGCTGAAGTTGATATCATGTACGGAGAAGGCATCTC
GTATCAAGGTGAGATTCTGGATATCGGTTCAGACATCGACATCGTTCAAAAGAGTGGTGCTTGGTATTCTTACGAAGGAG
AACGTTTAGGTCAAGGTCGTGAGAACTCGAAGCAATTCCTTAAAGAAAACCCTGAGATCGCATCAGCAATCGTTGCAGAA
ATCCGCAACTATTATCAGCTAGAAGGTAAAGCAGCTGCTGAAGTGGAAGCTCCTTCCTTGGAAGAAGAATTTGAGTTAAC
AGAATAG
ATGAGCGATAGAAAAGCGGCTCTAGATATGGCTCTACGCCAAATTGAAAAGCAGTTCGGTAAAGGTTCCATCATGAAATT
GGGTGAACAAACGGAACAGCGAATTTCAACAGTTTCCAGTGGATCGATCACTTTGGATATCGCACTTGGAATCGGTGGTT
ATCCTCGCGGAAGAATTATCGAAGTATATGGTCCTGAATCATCAGGGAAAACAACCGTTGCCCTTCATGCTATTGCAGAA
GTACAACGTAATGGTGGACAGGCTGCATTCATCGATGCTGAGCATGCACTAGACCCTGAATATGCTCAAAAGCTAGGCGT
TAATATTGATGAACTCTTATTGTCTCAGCCAGATACAGGTGAACAAGCGCTAGAGATCGCTGAAGCTCTTGTAAGAAGTG
GAGCGGTAGATATTTTGATCATCGACTCCGTTGCTGCACTTGTTCCTAAAGCTGAGATCGAAGGGGAGATGGGTGACTCT
CACGTTGGTCTCCAAGCTCGTCTAATGTCTCAAGCACTTCGTAAACTTTCAGGTGCCATCAATAAATCGAAAACCATCGC
AGTATTCATCAACCAAATTCGTGAAAAAGTTGGCGTTATGTTCGGAAATCCTGAAACAACACCAGGGGGAAGAGCTTTAA
AATTCTATTCATCTGTTCGTCTGGAAGTTCGTCGTGCTGAACAGCTGAAACAAGGACAAGACGTTGTTGGTAATAAAACA
AAAATTAAAGTCGTAAAAAATAAAGTAGCTCCTCCGTTTAGAACGGCTGAAGTTGATATCATGTACGGAGAAGGCATCTC
GTATCAAGGTGAGATTCTGGATATCGGTTCAGACATCGACATCGTTCAAAAGAGTGGTGCTTGGTATTCTTACGAAGGAG
AACGTTTAGGTCAAGGTCGTGAGAACTCGAAGCAATTCCTTAAAGAAAACCCTGAGATCGCATCAGCAATCGTTGCAGAA
ATCCGCAACTATTATCAGCTAGAAGGTAAAGCAGCTGCTGAAGTGGAAGCTCCTTCCTTGGAAGAAGAATTTGAGTTAAC
AGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.