Detailed information NTG1100106

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ACMS1Y_RS12030
• Genome accession: NZ_CP181431
• Coordinates: 2368645..2368803 (-)
• Length: 52 a.a.
• NCBI ID: WP_415315998.1
• Uniprot ID: -
• Organism: Bacillus safensis strain BS22LVI
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2363645..2373803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMS1Y_RS12005	rpsT	2363859..2364125 (+)	267	WP_024423042.1	30S ribosomal protein S20	-
ACMS1Y_RS12010	holA	2364260..2365279 (-)	1020	WP_046311824.1	DNA polymerase III subunit delta	-
ACMS1Y_RS12015	-	2365516..2365650 (+)	135	WP_012010638.1	YqzM family protein	-
ACMS1Y_RS12020	-	2365690..2368017 (-)	2328	WP_197172735.1	DNA internalization-related competence protein ComEC/Rec2	-
ACMS1Y_RS12025	-	2368010..2368579 (-)	570	WP_024423045.1	ComE operon protein 2	-
ACMS1Y_RS12030	comEA	2368645..2368803 (-)	159	WP_415315998.1	ComEA family DNA-binding protein	Machinery gene
ACMS1Y_RS12035	-	2368782..2369273 (-)	492	WP_415315999.1	SLBB domain-containing protein	-
ACMS1Y_RS12040	comER	2369364..2370212 (+)	849	WP_024423047.1	late competence protein ComER	-
ACMS1Y_RS12045	-	2370261..2371004 (-)	744	WP_025092940.1	class I SAM-dependent DNA methyltransferase	-
ACMS1Y_RS12050	rsfS	2371001..2371357 (-)	357	WP_003217467.1	ribosome silencing factor	-
ACMS1Y_RS12055	yqeK	2371371..2371934 (-)	564	WP_024427944.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ACMS1Y_RS12060	-	2371924..2372493 (-)	570	WP_087975783.1	nicotinate-nucleotide adenylyltransferase	-
ACMS1Y_RS12065	yhbY	2372507..2372797 (-)	291	WP_008342507.1	ribosome assembly RNA-binding protein YhbY	-
ACMS1Y_RS12070	aroE	2372791..2373633 (-)	843	WP_135032046.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 52 a.a.
• Molecular weight: 5889.68 Da
• Isoelectric Point: 5.7578

>NTDB_id=1100106 ACMS1Y_RS12030 WP_415315998.1 2368645..2368803(-) (comEA) [Bacillus safensis strain BS22LVI]
MQTINGIGPAKAEAIITYREEHGEFQQIEDLRNISGFGEKTIERLKSQLTVK

Nucleotide

• Length: 159 bp

>NTDB_id=1100106 ACMS1Y_RS12030 WP_415315998.1 2368645..2368803(-) (comEA) [Bacillus safensis strain BS22LVI]
TTGCAAACCATTAACGGCATAGGACCAGCTAAAGCCGAAGCTATCATTACGTATAGAGAGGAACACGGAGAATTTCAACA
AATTGAAGACTTGCGGAACATTTCAGGTTTTGGGGAAAAGACGATTGAACGGCTGAAAAGTCAATTGACCGTGAAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (2-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	61.538	100	0.615
comEA	Latilactobacillus sakei subsp. sakei 23K	60.784	98.077	0.596
comEA	Streptococcus thermophilus LMD-9	50.98	98.077	0.5
comEA	Lactococcus lactis subsp. cremoris KW2	47.059	98.077	0.462
comEA	Staphylococcus aureus N315	47.059	98.077	0.462
comEA	Staphylococcus aureus MW2	47.059	98.077	0.462
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	43.137	98.077	0.423
comEA/celA/cilE	Streptococcus mitis SK321	41.176	98.077	0.404
comE	Neisseria gonorrhoeae MS11	41.176	98.077	0.404
comE	Neisseria gonorrhoeae MS11	41.176	98.077	0.404
comE	Neisseria gonorrhoeae MS11	41.176	98.077	0.404
comE	Neisseria gonorrhoeae MS11	41.176	98.077	0.404
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	41.176	98.077	0.404
comEA/celA/cilE	Streptococcus pneumoniae R6	41.176	98.077	0.404
comEA/celA/cilE	Streptococcus pneumoniae Rx1	41.176	98.077	0.404
comEA/celA/cilE	Streptococcus mitis NCTC 12261	41.176	98.077	0.404
comEA/celA/cilE	Streptococcus pneumoniae D39	41.176	98.077	0.404
comEA	Acinetobacter baumannii D1279779	39.216	98.077	0.385
comE1/comEA	Haemophilus influenzae Rd KW20	46.512	82.692	0.385
comA	Synechocystis sp. PCC 6803	40	96.154	0.385
comEA	Vibrio cholerae strain A1552	51.282	75	0.385
comEA	Vibrio cholerae C6706	51.282	75	0.385
comEA	Vibrio parahaemolyticus RIMD 2210633	48.78	78.846	0.385
comEA	Acinetobacter baumannii strain A118	37.255	98.077	0.365
comEA	Acinetobacter baylyi ADP1	37.255	98.077	0.365
comEA/comE1	Glaesserella parasuis strain SC1401	48.718	75	0.365