Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACK8QM_RS04255 | Genome accession | NZ_CP180558 |
| Coordinates | 889622..890674 (+) | Length | 350 a.a. |
| NCBI ID | WP_005688187.1 | Uniprot ID | A0A5P5ZCT3 |
| Organism | Lacticaseibacillus rhamnosus strain MRD-YKTA | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 880413..929160 | 889622..890674 | within | 0 |
Gene organization within MGE regions
Location: 880413..929160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8QM_RS04220 | - | 880911..883211 (+) | 2301 | WP_014569347.1 | DNA translocase FtsK | - |
| ACK8QM_RS04225 | yfmF | 883220..884482 (+) | 1263 | WP_014569348.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| ACK8QM_RS04230 | yfmH | 884479..885771 (+) | 1293 | WP_014569349.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| ACK8QM_RS04235 | ymfI | 885771..886499 (+) | 729 | WP_014569350.1 | elongation factor P 5-aminopentanone reductase | - |
| ACK8QM_RS04240 | - | 886586..887521 (+) | 936 | WP_005688668.1 | helix-turn-helix domain-containing protein | - |
| ACK8QM_RS04245 | pgsA | 887518..888108 (+) | 591 | WP_014569351.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ACK8QM_RS04250 | cinA | 888329..889570 (+) | 1242 | WP_014569352.1 | competence/damage-inducible protein A | Machinery gene |
| ACK8QM_RS04255 | recA | 889622..890674 (+) | 1053 | WP_005688187.1 | recombinase RecA | Machinery gene |
| ACK8QM_RS04260 | rny | 891299..892870 (+) | 1572 | WP_005684479.1 | ribonuclease Y | - |
| ACK8QM_RS04265 | - | 892959..893615 (-) | 657 | WP_029943817.1 | YigZ family protein | - |
| ACK8QM_RS04270 | - | 893643..894908 (+) | 1266 | WP_014569356.1 | DEAD/DEAH box helicase | - |
| ACK8QM_RS04275 | - | 895067..895585 (+) | 519 | WP_005688681.1 | ComF family protein | - |
| ACK8QM_RS04280 | hpf | 895777..896334 (+) | 558 | WP_005684485.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| ACK8QM_RS04285 | secA | 896917..899280 (+) | 2364 | WP_005684487.1 | preprotein translocase subunit SecA | - |
| ACK8QM_RS04290 | prfB | 899422..900538 (+) | 1117 | WP_154241369.1 | peptide chain release factor 2 | - |
| ACK8QM_RS04295 | ftsE | 900615..901301 (+) | 687 | WP_005684489.1 | cell division ATP-binding protein FtsE | - |
| ACK8QM_RS04300 | ftsX | 901291..902178 (+) | 888 | WP_005684490.1 | permease-like cell division protein FtsX | - |
| ACK8QM_RS04305 | - | 902256..902393 (+) | 138 | WP_014569359.1 | hypothetical protein | - |
| ACK8QM_RS04310 | - | 902449..903546 (+) | 1098 | WP_014569360.1 | PDZ domain-containing protein | - |
| ACK8QM_RS04315 | - | 903543..904247 (+) | 705 | WP_005688690.1 | response regulator transcription factor | - |
| ACK8QM_RS04320 | pnpS | 904240..905907 (+) | 1668 | WP_014569361.1 | two-component system histidine kinase PnpS | - |
| ACK8QM_RS04325 | - | 905997..906863 (+) | 867 | WP_005684496.1 | phosphate ABC transporter substrate-binding protein PstS family protein | - |
| ACK8QM_RS04330 | pstC | 907011..907934 (+) | 924 | WP_005684497.1 | phosphate ABC transporter permease subunit PstC | - |
| ACK8QM_RS04335 | pstA | 907931..908815 (+) | 885 | WP_005684499.1 | phosphate ABC transporter permease PstA | - |
| ACK8QM_RS04340 | pstB | 908886..909704 (+) | 819 | WP_005713669.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ACK8QM_RS04345 | pstB | 909714..910478 (+) | 765 | WP_005684501.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ACK8QM_RS04350 | phoU | 910489..911166 (+) | 678 | WP_005684502.1 | phosphate signaling complex protein PhoU | - |
| ACK8QM_RS04355 | - | 911420..912298 (-) | 879 | WP_048653158.1 | IS3 family transposase | - |
| ACK8QM_RS04360 | - | 912295..913023 (-) | 729 | WP_014569363.1 | helix-turn-helix domain-containing protein | - |
| ACK8QM_RS04365 | liaX | 913592..914942 (+) | 1351 | Protein_831 | daptomycin-sensing surface protein LiaX | - |
| ACK8QM_RS04370 | - | 914954..915214 (+) | 261 | WP_005688700.1 | hypothetical protein | - |
| ACK8QM_RS04375 | - | 915217..915552 (+) | 336 | WP_005684507.1 | phage holin family protein | - |
| ACK8QM_RS04380 | hprK | 915819..916778 (+) | 960 | WP_005684508.1 | HPr(Ser) kinase/phosphatase | - |
| ACK8QM_RS04385 | lgt | 916780..917607 (+) | 828 | WP_014569365.1 | prolipoprotein diacylglyceryl transferase | - |
| ACK8QM_RS04390 | - | 917618..918673 (+) | 1056 | WP_014569366.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| ACK8QM_RS04395 | trxB | 918739..919686 (+) | 948 | WP_005684511.1 | thioredoxin-disulfide reductase | - |
| ACK8QM_RS04400 | - | 919938..921665 (+) | 1728 | WP_014569367.1 | phospho-sugar mutase | - |
| ACK8QM_RS04405 | - | 922125..922772 (+) | 648 | WP_014569368.1 | YfbR-like 5'-deoxynucleotidase | - |
| ACK8QM_RS04410 | uvrB | 923043..925058 (+) | 2016 | WP_005688715.1 | excinuclease ABC subunit UvrB | - |
| ACK8QM_RS04415 | uvrA | 925239..928133 (+) | 2895 | WP_014569369.1 | excinuclease ABC subunit UvrA | - |
| ACK8QM_RS04420 | - | 928335..928874 (+) | 540 | WP_014569370.1 | HdeD family acid-resistance protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 37586.87 Da Isoelectric Point: 5.5040
>NTDB_id=1096582 ACK8QM_RS04255 WP_005688187.1 889622..890674(+) (recA) [Lacticaseibacillus rhamnosus strain MRD-YKTA]
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAV
AMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGN
RTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDIIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIE
KQVRLAYGMSPDHVIDQADIETDTTTSAAS
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAV
AMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGN
RTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDIIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIE
KQVRLAYGMSPDHVIDQADIETDTTTSAAS
Nucleotide
Download Length: 1053 bp
>NTDB_id=1096582 ACK8QM_RS04255 WP_005688187.1 889622..890674(+) (recA) [Lacticaseibacillus rhamnosus strain MRD-YKTA]
ATGGCAGAAACCGAACGACAGGAAGCATTGGCAACGGCGTTAAAGAAGATTGAGAAGAATTTTGGCAAAGGGGCCATTAT
GCGGATGGGGGACAAAGTGGAGACACGCGTTTCTGCTGTTTCCAGCGGATCACTTGCAATTGATGATGCACTTGGTGTTG
GTGGGCTGCCACGTGGACGAATTGTTGAAATCTATGGTCCGGAAAGTTCCGGGAAAACGACTGTGGCCTTGCATGCAGTT
GCCATGGTTCAGCAACACGGTGGCACGGCCGCTTATATTGATGCTGAAAATGCCATGGATCCCAAATATGCGGCGGCACT
TGGCGTCAATATTGATGAGCTGTTGCTTTCACAGCCGGATACCGGTGAACAAGGATTAGAAATTGCCGATGAGCTGGTTG
CATCGGGCGCCATTGATATTTTAGTGGTTGATTCAGTGGCAGCTCTGGTACCGCGCGCAGAAATTGAAGGGGACATGGGT
GATGCACACGTTGGGTTACAGGCACGGCTAATGTCACAGGCCTTACGAAAGTTGTCTGGGGCGATCAATAAGACCAAAAC
AATTGCCTTGTTCATTAACCAGATCCGGGAAAAAGTCGGCATTGTATTCGGCAATCCTGAAATTACGCCAGGTGGTCGGG
CGCTGAAATTTTATGCTACTGTGCGTATGGAAGTGCGCCGTTCCGAGCAGATCAAAAACGGTGCCGATATTATTGGCAAT
CGCACCAAAATCAAAGTGGTTAAAAATAAAGTTGCACCGCCGTTTAAGACTGCCATTGTTGATATTATGTATGGTCAAGG
CATTTCCCAAAGCGGTGAACTTGTCGACATGGCGGTTGAAAAAGACATCATTGAAAAGGCGGGTTCATGGTATGCCTACC
AAGGCGAGCGCATTGGTCAAGGACGTGAGCACGCTAAAAGCTATCTTGAAACGCATGAGGAGCTGCGCCGAACCATTGAA
AAACAAGTCCGGCTTGCTTATGGAATGTCGCCGGATCACGTTATCGATCAAGCAGACATAGAGACAGATACTACCACATC
TGCCGCATCATGA
ATGGCAGAAACCGAACGACAGGAAGCATTGGCAACGGCGTTAAAGAAGATTGAGAAGAATTTTGGCAAAGGGGCCATTAT
GCGGATGGGGGACAAAGTGGAGACACGCGTTTCTGCTGTTTCCAGCGGATCACTTGCAATTGATGATGCACTTGGTGTTG
GTGGGCTGCCACGTGGACGAATTGTTGAAATCTATGGTCCGGAAAGTTCCGGGAAAACGACTGTGGCCTTGCATGCAGTT
GCCATGGTTCAGCAACACGGTGGCACGGCCGCTTATATTGATGCTGAAAATGCCATGGATCCCAAATATGCGGCGGCACT
TGGCGTCAATATTGATGAGCTGTTGCTTTCACAGCCGGATACCGGTGAACAAGGATTAGAAATTGCCGATGAGCTGGTTG
CATCGGGCGCCATTGATATTTTAGTGGTTGATTCAGTGGCAGCTCTGGTACCGCGCGCAGAAATTGAAGGGGACATGGGT
GATGCACACGTTGGGTTACAGGCACGGCTAATGTCACAGGCCTTACGAAAGTTGTCTGGGGCGATCAATAAGACCAAAAC
AATTGCCTTGTTCATTAACCAGATCCGGGAAAAAGTCGGCATTGTATTCGGCAATCCTGAAATTACGCCAGGTGGTCGGG
CGCTGAAATTTTATGCTACTGTGCGTATGGAAGTGCGCCGTTCCGAGCAGATCAAAAACGGTGCCGATATTATTGGCAAT
CGCACCAAAATCAAAGTGGTTAAAAATAAAGTTGCACCGCCGTTTAAGACTGCCATTGTTGATATTATGTATGGTCAAGG
CATTTCCCAAAGCGGTGAACTTGTCGACATGGCGGTTGAAAAAGACATCATTGAAAAGGCGGGTTCATGGTATGCCTACC
AAGGCGAGCGCATTGGTCAAGGACGTGAGCACGCTAAAAGCTATCTTGAAACGCATGAGGAGCTGCGCCGAACCATTGAA
AAACAAGTCCGGCTTGCTTATGGAATGTCGCCGGATCACGTTATCGATCAAGCAGACATAGAGACAGATACTACCACATC
TGCCGCATCATGA
Similar proteins
Only experimentally validated proteins are listed.