Detailed information NTG1085476

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACLHWB_RS08230
• Genome accession: NZ_CP177123
• Coordinates: 1715668..1716717 (+)
• Length: 349 a.a.
• NCBI ID: WP_126781650.1
• Uniprot ID: A0A429ZGA8
• Organism: Vagococcus salmoninarum strain 2022-03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1710668..1721717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLHWB_RS08210 (ACLHWB_08210)	yfmH	1711218..1712522 (+)	1305	WP_193989623.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
ACLHWB_RS08215 (ACLHWB_08215)	-	1712684..1713571 (+)	888	WP_193989624.1	RodZ domain-containing protein	-
ACLHWB_RS08220 (ACLHWB_08220)	pgsA	1713604..1714182 (+)	579	WP_193989678.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACLHWB_RS08225 (ACLHWB_08225)	cinA	1714308..1715558 (+)	1251	WP_193989625.1	competence/damage-inducible protein A	Machinery gene
ACLHWB_RS08230 (ACLHWB_08230)	recA	1715668..1716717 (+)	1050	WP_126781650.1	recombinase RecA	Machinery gene
ACLHWB_RS08235 (ACLHWB_08235)	rny	1717511..1719067 (+)	1557	WP_126781652.1	ribonuclease Y	-
ACLHWB_RS08240 (ACLHWB_08240)	-	1719163..1719669 (+)	507	WP_193989626.1	LysM peptidoglycan-binding domain-containing protein	-
ACLHWB_RS08245 (ACLHWB_08245)	-	1719686..1720327 (+)	642	WP_193989627.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37615.04 Da
• Isoelectric Point: 5.3603

>NTDB_id=1085476 ACLHWB_RS08230 WP_126781650.1 1715668..1716717(+) (recA) [Vagococcus salmoninarum strain 2022-03]
MADDRKVALDAALKKIEKSFGKGSIMKLGEKIDTQISTVPSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIA
EVQRNGGTAAFIDAEHALDPKYAQNLGVNIDELLLSQPDTGEQGLEIADALVSSGAIDIVVVDSVAALVPRAEIDGEMGD
AHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGVMFGNPEITPGGRALKFYATVRLEVRRAEQLKIGTDIIGNR
TKIKVVKNKVAPPFKVAEVDLMYGEGISKAGELIDMASDRDIVDKSGAWYSYKEERIGQGRENAKRYILDHPAMFAEIES
RVRNEFGIGDGSEEVAEPVEVTLDLKDKK

Nucleotide

• Length: 1050 bp

>NTDB_id=1085476 ACLHWB_RS08230 WP_126781650.1 1715668..1716717(+) (recA) [Vagococcus salmoninarum strain 2022-03]
GTGGCAGATGATCGTAAAGTAGCCTTAGACGCTGCGTTAAAAAAGATAGAAAAAAGTTTCGGTAAAGGGTCAATTATGAA
GTTAGGGGAAAAGATTGATACGCAAATCTCAACTGTTCCCAGTGGTTCGCTAGCACTAGACGTTGCGCTAGGTGTAGGTG
GCTACCCTCGAGGTCGGATTATTGAAGTTTATGGTCCAGAGAGTTCAGGTAAAACAACTGTTGCCTTACATGCCATCGCT
GAAGTTCAACGAAATGGCGGAACAGCAGCCTTTATTGATGCTGAGCATGCCTTAGATCCAAAATATGCCCAAAACTTAGG
GGTAAACATCGATGAATTATTATTATCACAACCAGATACTGGTGAGCAAGGCCTAGAAATTGCTGATGCTTTAGTTTCAA
GTGGCGCGATTGATATCGTTGTTGTCGATTCAGTAGCAGCCTTAGTTCCCCGTGCGGAAATTGATGGCGAAATGGGTGAT
GCCCACGTTGGCTTACAAGCTCGTTTAATGTCTCAAGCCCTACGTAAATTATCAGGTTCAATCAATAAAACTAAAACGAT
TGCGTTATTCATTAACCAAATTCGTGAAAAAGTCGGCGTCATGTTTGGTAACCCAGAAATTACCCCTGGTGGTCGCGCGT
TGAAGTTCTACGCAACGGTCCGCTTAGAAGTCCGTCGTGCAGAGCAATTAAAAATCGGAACGGATATTATTGGTAACCGT
ACGAAAATTAAAGTTGTTAAAAACAAAGTTGCACCACCATTTAAAGTGGCAGAAGTTGATTTAATGTACGGCGAAGGAAT
TTCAAAAGCCGGCGAACTAATCGATATGGCTTCTGATCGTGACATCGTTGATAAGAGTGGTGCTTGGTACTCTTACAAAG
AAGAACGAATTGGTCAAGGTCGTGAAAATGCGAAACGTTACATCTTAGATCATCCAGCGATGTTTGCTGAAATCGAAAGC
CGTGTTAGAAATGAATTCGGCATTGGTGATGGCAGTGAAGAAGTGGCTGAACCAGTTGAAGTTACCTTAGATTTAAAAGA
TAAAAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

3D structure

• AlphaFold DB: A0A429ZGA8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	80.723	95.129	0.768
recA	Bacillus subtilis subsp. subtilis str. 168	79.077	93.123	0.736
recA	Streptococcus mitis SK321	69.444	100	0.716
recA	Streptococcus mitis NCTC 12261	68.975	100	0.713
recA	Streptococcus pneumoniae D39	71.598	96.848	0.693
recA	Streptococcus pneumoniae Rx1	71.598	96.848	0.693
recA	Streptococcus pneumoniae R6	71.598	96.848	0.693
recA	Streptococcus pneumoniae TIGR4	71.598	96.848	0.693
recA	Streptococcus pyogenes NZ131	71.903	94.842	0.682
recA	Streptococcus mutans UA159	66.573	100	0.679
recA	Lactococcus lactis subsp. cremoris KW2	67.066	95.702	0.642
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.727	94.556	0.593
recA	Neisseria gonorrhoeae MS11	61.702	94.269	0.582
recA	Neisseria gonorrhoeae MS11	61.702	94.269	0.582
recA	Neisseria gonorrhoeae strain FA1090	61.702	94.269	0.582
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.702	94.269	0.582
recA	Helicobacter pylori 26695	58.601	98.281	0.576
recA	Helicobacter pylori strain NCTC11637	58.601	98.281	0.576
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.422	92.264	0.576
recA	Ralstonia pseudosolanacearum GMI1000	61.656	93.41	0.576
recA	Glaesserella parasuis strain SC1401	61.491	92.264	0.567
recA	Acinetobacter baumannii D1279779	60.429	93.41	0.564
recA	Acinetobacter baylyi ADP1	60.429	93.41	0.564
recA	Pseudomonas stutzeri DSM 10701	59.509	93.41	0.556
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.752	92.55	0.553
recA	Vibrio cholerae strain A1552	59.752	92.55	0.553