Detailed information NTG1077128

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACJD0W_RS12535
• Genome accession: NZ_CP174456
• Coordinates: 2766181..2767224 (-)
• Length: 347 a.a.
• NCBI ID: WP_010450238.1
• Uniprot ID: A0A2K7SNW4
• Organism: Vibrio rotiferianus strain BD182406
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2761181..2772224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJD0W_RS12520	-	2761392..2762579 (-)	1188	WP_010450234.1	aspartate kinase	-
ACJD0W_RS12525	alaS	2762783..2765365 (-)	2583	WP_010450235.1	alanine--tRNA ligase	-
ACJD0W_RS12530	recX	2765505..2765975 (-)	471	WP_010450236.1	recombination regulator RecX	-
ACJD0W_RS12535	recA	2766181..2767224 (-)	1044	WP_010450238.1	recombinase RecA	Machinery gene
ACJD0W_RS12540	pncC	2767425..2767907 (-)	483	WP_010450240.1	nicotinamide-nucleotide amidase	-
ACJD0W_RS12545	mutS	2767993..2770554 (+)	2562	WP_010450242.1	DNA mismatch repair protein MutS	-
ACJD0W_RS12550	rpoS	2770643..2771629 (-)	987	WP_010450244.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37442.90 Da
• Isoelectric Point: 4.9743

>NTDB_id=1077128 ACJD0W_RS12535 WP_010450238.1 2766181..2767224(-) (recA) [Vibrio rotiferianus strain BD182406]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYQGDKIGQGKANACNYLRENPEIGKTIDT
KLREMLLSPALPEAPEAGEKSEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=1077128 ACJD0W_RS12535 WP_010450238.1 2766181..2767224(-) (recA) [Vibrio rotiferianus strain BD182406]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGCGCAATGGATGTAGAAACCATCTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTAGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACGCTAACTCTTGAGCTTATCGCA
GCTGCACAACGTGAAGGTAAAACTTGTGCGTTTATCGATGCAGAGCACGCTCTAGATCCTGTATACGCGAAGAAACTTGG
CGTTGATATCGATGCACTGTTGGTTTCTCAGCCAGACACAGGTGAGCAAGCGCTAGAGATCTGTGACGCACTTGCACGTT
CTGGTGCTATCGACGTTATGGTTGTCGACTCAGTTGCGGCTCTAACACCAAAAGCAGAAATCGAAGGCGAGATGGGCGAC
AGCCACATGGGTCTTCAAGCACGTATGCTTTCTCAAGCGATGCGTAAGCTAACGGGTAACCTAAAGCAATCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTAATGTTTGGTAACCCAGAAACAACAACGGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGCCTAGATATTCGTCGTACTGGCGCAATCAAAGAAGGTGACGAAGTAGTAGGTAACGAA
ACGCGCATCAAAGTTGTTAAGAACAAGATTGCTGCACCGTTTAAAGAAGCAAACACGCAAATCATGTACGGCCAAGGTTT
CAACCGTGAAGGTGAACTGATTGACCTAGGCGTGAAGCACAAGCTAGTTGAAAAAGCGGGTGCATGGTACAGCTACCAAG
GCGACAAGATTGGCCAAGGTAAAGCAAACGCTTGTAACTACCTACGCGAAAACCCAGAAATCGGTAAGACTATCGATACT
AAACTGCGTGAAATGCTACTTTCACCAGCACTACCTGAAGCACCAGAAGCCGGTGAAAAATCAGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A2K7SNW4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.441	94.813	0.905
recA	Vibrio cholerae strain A1552	95.441	94.813	0.905
recA	Acinetobacter baylyi ADP1	72.543	99.712	0.723
recA	Pseudomonas stutzeri DSM 10701	75.841	94.236	0.715
recA	Acinetobacter baumannii D1279779	75	94.524	0.709
recA	Glaesserella parasuis strain SC1401	70.859	93.948	0.666
recA	Neisseria gonorrhoeae MS11	68.712	93.948	0.646
recA	Neisseria gonorrhoeae MS11	68.712	93.948	0.646
recA	Neisseria gonorrhoeae strain FA1090	68.712	93.948	0.646
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.625	0.637
recA	Helicobacter pylori strain NCTC11637	60.882	97.983	0.597
recA	Helicobacter pylori 26695	60.588	97.983	0.594
recA	Streptococcus mitis SK321	59.593	99.135	0.591
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	91.931	0.585
recA	Streptococcus pneumoniae R6	62.539	93.084	0.582
recA	Streptococcus pneumoniae Rx1	62.539	93.084	0.582
recA	Streptococcus pneumoniae D39	62.539	93.084	0.582
recA	Streptococcus pneumoniae TIGR4	62.539	93.084	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.507	0.582
recA	Streptococcus mitis NCTC 12261	62.229	93.084	0.579
recA	Streptococcus mutans UA159	60.923	93.66	0.571
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.389	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Streptococcus pyogenes NZ131	60.615	93.66	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	59.215	95.389	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.062	93.084	0.559