Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACI5K2_RS04260 | Genome accession | NZ_CP174089 |
| Coordinates | 894107..895159 (+) | Length | 350 a.a. |
| NCBI ID | WP_005688187.1 | Uniprot ID | A0A5P5ZCT3 |
| Organism | Lacticaseibacillus rhamnosus strain 484 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 884898..933785 | 894107..895159 | within | 0 |
Gene organization within MGE regions
Location: 884898..933785
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI5K2_RS04225 (ACI5K2_04225) | - | 885396..887696 (+) | 2301 | WP_014569347.1 | DNA translocase FtsK | - |
| ACI5K2_RS04230 (ACI5K2_04230) | yfmF | 887705..888967 (+) | 1263 | WP_014569348.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| ACI5K2_RS04235 (ACI5K2_04235) | yfmH | 888964..890256 (+) | 1293 | WP_014569349.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| ACI5K2_RS04240 (ACI5K2_04240) | ymfI | 890256..890984 (+) | 729 | WP_014569350.1 | elongation factor P 5-aminopentanone reductase | - |
| ACI5K2_RS04245 (ACI5K2_04245) | - | 891071..892006 (+) | 936 | WP_005688668.1 | helix-turn-helix domain-containing protein | - |
| ACI5K2_RS04250 (ACI5K2_04250) | pgsA | 892003..892593 (+) | 591 | WP_014569351.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ACI5K2_RS04255 (ACI5K2_04255) | cinA | 892814..894055 (+) | 1242 | WP_014569352.1 | competence/damage-inducible protein A | Machinery gene |
| ACI5K2_RS04260 (ACI5K2_04260) | recA | 894107..895159 (+) | 1053 | WP_005688187.1 | recombinase RecA | Machinery gene |
| ACI5K2_RS04265 (ACI5K2_04265) | rny | 895784..897355 (+) | 1572 | WP_005684479.1 | ribonuclease Y | - |
| ACI5K2_RS04270 (ACI5K2_04270) | - | 897444..898100 (-) | 657 | WP_029943817.1 | YigZ family protein | - |
| ACI5K2_RS04275 (ACI5K2_04275) | - | 898128..899393 (+) | 1266 | WP_014569356.1 | DEAD/DEAH box helicase | - |
| ACI5K2_RS04280 (ACI5K2_04280) | - | 899552..900070 (+) | 519 | WP_005688681.1 | ComF family protein | - |
| ACI5K2_RS04285 (ACI5K2_04285) | hpf | 900262..900819 (+) | 558 | WP_005684485.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| ACI5K2_RS04290 (ACI5K2_04290) | secA | 901402..903765 (+) | 2364 | WP_005684487.1 | preprotein translocase subunit SecA | - |
| ACI5K2_RS04295 (ACI5K2_04295) | prfB | 903907..905023 (+) | 1117 | WP_154241369.1 | peptide chain release factor 2 | - |
| ACI5K2_RS04300 (ACI5K2_04300) | ftsE | 905100..905786 (+) | 687 | WP_005684489.1 | cell division ATP-binding protein FtsE | - |
| ACI5K2_RS04305 (ACI5K2_04305) | ftsX | 905776..906663 (+) | 888 | WP_005684490.1 | permease-like cell division protein FtsX | - |
| ACI5K2_RS04310 (ACI5K2_04310) | - | 906741..906878 (+) | 138 | WP_014569359.1 | hypothetical protein | - |
| ACI5K2_RS04315 (ACI5K2_04315) | - | 906934..908031 (+) | 1098 | WP_014569360.1 | PDZ domain-containing protein | - |
| ACI5K2_RS04320 (ACI5K2_04320) | - | 908028..908732 (+) | 705 | WP_005688690.1 | response regulator transcription factor | - |
| ACI5K2_RS04325 (ACI5K2_04325) | pnpS | 908725..910392 (+) | 1668 | WP_014569361.1 | two-component system histidine kinase PnpS | - |
| ACI5K2_RS04330 (ACI5K2_04330) | - | 910482..911348 (+) | 867 | WP_005684496.1 | phosphate ABC transporter substrate-binding protein PstS family protein | - |
| ACI5K2_RS04335 (ACI5K2_04335) | pstC | 911496..912419 (+) | 924 | WP_005684497.1 | phosphate ABC transporter permease subunit PstC | - |
| ACI5K2_RS04340 (ACI5K2_04340) | pstA | 912416..913300 (+) | 885 | WP_005684499.1 | phosphate ABC transporter permease PstA | - |
| ACI5K2_RS04345 (ACI5K2_04345) | pstB | 913371..914189 (+) | 819 | WP_005713669.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ACI5K2_RS04350 (ACI5K2_04350) | pstB | 914199..914963 (+) | 765 | WP_005684501.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ACI5K2_RS04355 (ACI5K2_04355) | phoU | 914974..915651 (+) | 678 | WP_005684502.1 | phosphate signaling complex protein PhoU | - |
| ACI5K2_RS04360 (ACI5K2_04360) | - | 915905..916783 (-) | 879 | WP_048653158.1 | IS3 family transposase | - |
| ACI5K2_RS04365 (ACI5K2_04365) | - | 916780..917508 (-) | 729 | WP_014569363.1 | helix-turn-helix domain-containing protein | - |
| ACI5K2_RS04370 (ACI5K2_04370) | liaX | 918077..919567 (+) | 1491 | WP_014569364.1 | daptomycin-sensing surface protein LiaX | - |
| ACI5K2_RS04375 (ACI5K2_04375) | - | 919579..919839 (+) | 261 | WP_005688700.1 | hypothetical protein | - |
| ACI5K2_RS04380 (ACI5K2_04380) | - | 919842..920177 (+) | 336 | WP_005684507.1 | phage holin family protein | - |
| ACI5K2_RS04385 (ACI5K2_04385) | hprK | 920444..921403 (+) | 960 | WP_005684508.1 | HPr(Ser) kinase/phosphatase | - |
| ACI5K2_RS04390 (ACI5K2_04390) | lgt | 921405..922232 (+) | 828 | WP_014569365.1 | prolipoprotein diacylglyceryl transferase | - |
| ACI5K2_RS04395 (ACI5K2_04395) | - | 922243..923298 (+) | 1056 | WP_014569366.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| ACI5K2_RS04400 (ACI5K2_04400) | trxB | 923364..924311 (+) | 948 | WP_005684511.1 | thioredoxin-disulfide reductase | - |
| ACI5K2_RS04405 (ACI5K2_04405) | - | 924563..926290 (+) | 1728 | WP_014569367.1 | phospho-sugar mutase | - |
| ACI5K2_RS04410 (ACI5K2_04410) | - | 926750..927397 (+) | 648 | WP_014569368.1 | YfbR-like 5'-deoxynucleotidase | - |
| ACI5K2_RS04415 (ACI5K2_04415) | uvrB | 927668..929683 (+) | 2016 | WP_005688715.1 | excinuclease ABC subunit UvrB | - |
| ACI5K2_RS04420 (ACI5K2_04420) | uvrA | 929864..932758 (+) | 2895 | WP_014569369.1 | excinuclease ABC subunit UvrA | - |
| ACI5K2_RS04425 (ACI5K2_04425) | - | 932960..933499 (+) | 540 | WP_014569370.1 | HdeD family acid-resistance protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 37586.87 Da Isoelectric Point: 5.5040
>NTDB_id=1074151 ACI5K2_RS04260 WP_005688187.1 894107..895159(+) (recA) [Lacticaseibacillus rhamnosus strain 484]
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAV
AMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGN
RTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDIIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIE
KQVRLAYGMSPDHVIDQADIETDTTTSAAS
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAV
AMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGN
RTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDIIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIE
KQVRLAYGMSPDHVIDQADIETDTTTSAAS
Nucleotide
Download Length: 1053 bp
>NTDB_id=1074151 ACI5K2_RS04260 WP_005688187.1 894107..895159(+) (recA) [Lacticaseibacillus rhamnosus strain 484]
ATGGCAGAAACCGAACGACAGGAAGCATTGGCAACGGCGTTAAAGAAGATTGAGAAGAATTTTGGCAAAGGGGCCATTAT
GCGGATGGGGGACAAAGTGGAGACACGCGTTTCTGCTGTTTCCAGCGGATCACTTGCAATTGATGATGCACTTGGTGTTG
GTGGGCTGCCACGTGGACGAATTGTTGAAATCTATGGTCCGGAAAGTTCCGGGAAAACGACTGTGGCCTTGCATGCAGTT
GCCATGGTTCAGCAACACGGTGGCACGGCCGCTTATATTGATGCTGAAAATGCCATGGATCCCAAATATGCGGCGGCACT
TGGCGTCAATATTGATGAGCTGTTGCTTTCACAGCCGGATACCGGTGAACAAGGATTAGAAATTGCCGATGAGCTGGTTG
CATCGGGCGCCATTGATATTTTAGTGGTTGATTCAGTGGCAGCTCTGGTACCGCGCGCAGAAATTGAAGGGGACATGGGT
GATGCACACGTTGGGTTACAGGCACGGCTAATGTCACAGGCCTTACGAAAGTTGTCTGGGGCGATCAATAAGACCAAAAC
AATTGCCTTGTTCATTAACCAGATCCGGGAAAAAGTCGGCATTGTATTCGGCAATCCTGAAATTACGCCAGGTGGTCGGG
CGCTGAAATTTTATGCTACTGTGCGTATGGAAGTGCGCCGTTCCGAGCAGATCAAAAACGGTGCCGATATTATTGGCAAT
CGCACCAAAATCAAAGTGGTTAAAAATAAAGTTGCACCGCCGTTTAAGACTGCCATTGTTGATATTATGTATGGTCAAGG
CATTTCCCAAAGCGGTGAACTTGTCGACATGGCGGTTGAAAAAGACATCATTGAAAAGGCGGGTTCATGGTATGCCTACC
AAGGCGAGCGCATTGGTCAAGGACGTGAGCACGCTAAAAGCTATCTTGAAACGCATGAGGAGCTGCGCCGAACCATTGAA
AAACAAGTCCGGCTTGCTTATGGAATGTCGCCGGATCACGTTATCGATCAAGCAGACATAGAGACAGATACTACCACATC
TGCCGCATCATGA
ATGGCAGAAACCGAACGACAGGAAGCATTGGCAACGGCGTTAAAGAAGATTGAGAAGAATTTTGGCAAAGGGGCCATTAT
GCGGATGGGGGACAAAGTGGAGACACGCGTTTCTGCTGTTTCCAGCGGATCACTTGCAATTGATGATGCACTTGGTGTTG
GTGGGCTGCCACGTGGACGAATTGTTGAAATCTATGGTCCGGAAAGTTCCGGGAAAACGACTGTGGCCTTGCATGCAGTT
GCCATGGTTCAGCAACACGGTGGCACGGCCGCTTATATTGATGCTGAAAATGCCATGGATCCCAAATATGCGGCGGCACT
TGGCGTCAATATTGATGAGCTGTTGCTTTCACAGCCGGATACCGGTGAACAAGGATTAGAAATTGCCGATGAGCTGGTTG
CATCGGGCGCCATTGATATTTTAGTGGTTGATTCAGTGGCAGCTCTGGTACCGCGCGCAGAAATTGAAGGGGACATGGGT
GATGCACACGTTGGGTTACAGGCACGGCTAATGTCACAGGCCTTACGAAAGTTGTCTGGGGCGATCAATAAGACCAAAAC
AATTGCCTTGTTCATTAACCAGATCCGGGAAAAAGTCGGCATTGTATTCGGCAATCCTGAAATTACGCCAGGTGGTCGGG
CGCTGAAATTTTATGCTACTGTGCGTATGGAAGTGCGCCGTTCCGAGCAGATCAAAAACGGTGCCGATATTATTGGCAAT
CGCACCAAAATCAAAGTGGTTAAAAATAAAGTTGCACCGCCGTTTAAGACTGCCATTGTTGATATTATGTATGGTCAAGG
CATTTCCCAAAGCGGTGAACTTGTCGACATGGCGGTTGAAAAAGACATCATTGAAAAGGCGGGTTCATGGTATGCCTACC
AAGGCGAGCGCATTGGTCAAGGACGTGAGCACGCTAAAAGCTATCTTGAAACGCATGAGGAGCTGCGCCGAACCATTGAA
AAACAAGTCCGGCTTGCTTATGGAATGTCGCCGGATCACGTTATCGATCAAGCAGACATAGAGACAGATACTACCACATC
TGCCGCATCATGA
Similar proteins
Only experimentally validated proteins are listed.