Detailed information NTG1064656

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACHFJ9_RS20190
• Genome accession: NZ_CP171887
• Coordinates: 2649434..2650477 (-)
• Length: 347 a.a.
• NCBI ID: WP_005393872.1
• Uniprot ID: A0AAE4S8L2
• Organism: Vibrio sp. D3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2644434..2655477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHFJ9_RS20175 (ACHFJ9_20175)	-	2644713..2645900 (-)	1188	WP_005393869.1	aspartate kinase	-
ACHFJ9_RS20180 (ACHFJ9_20180)	alaS	2646113..2648695 (-)	2583	WP_109169448.1	alanine--tRNA ligase	-
ACHFJ9_RS20185 (ACHFJ9_20185)	recX	2648838..2649305 (-)	468	WP_005393871.1	recombination regulator RecX	-
ACHFJ9_RS20190 (ACHFJ9_20190)	recA	2649434..2650477 (-)	1044	WP_005393872.1	recombinase RecA	Machinery gene
ACHFJ9_RS20195 (ACHFJ9_20195)	pncC	2650678..2651160 (-)	483	WP_104970950.1	nicotinamide-nucleotide amidase	-
ACHFJ9_RS20200 (ACHFJ9_20200)	mutS	2651245..2653806 (+)	2562	WP_006743294.1	DNA mismatch repair protein MutS	-
ACHFJ9_RS20205 (ACHFJ9_20205)	rpoS	2653889..2654875 (-)	987	WP_005393877.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37290.75 Da
• Isoelectric Point: 5.0618

>NTDB_id=1064656 ACHFJ9_RS20190 WP_005393872.1 2649434..2650477(-) (recA) [Vibrio sp. D3]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELVDLGVKHKLVEKAGAWYSYQGDKIGQGKANACNYLREHPEVAKTIDT
KLREMLLAPALAEAPEAGEAPEQAEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=1064656 ACHFJ9_RS20190 WP_005393872.1 2649434..2650477(-) (recA) [Vibrio sp. D3]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATCATGCG
CCTTGGTGATAACCGAGCAATGGACGTAGAAACCATCTCAACAGGCTCTCTTTCTCTTGATATCGCTTTGGGTGCAGGTG
GTCTGCCAATGGGTCGTATCGTAGAAGTCTACGGTCCAGAATCTTCAGGTAAAACAACACTAACGCTTGAGCTTATCGCT
GCTGCGCAACGTGAAGGTAAAACTTGTGCGTTTATCGATGCAGAGCACGCTCTGGATCCTGTCTACGCGAAGAAACTTGG
TGTTGATATCGATGCGCTCTTGGTTTCTCAGCCAGACACTGGTGAGCAAGCACTAGAGATTTGTGATGCACTAGCTCGCT
CTGGCGCTATCGACGTAATGGTTGTTGACTCAGTTGCGGCGCTAACACCAAAAGCAGAAATTGAAGGCGAAATGGGCGAC
AGCCACATGGGTTTGCAAGCACGTATGCTTTCTCAAGCGATGCGTAAGCTAACAGGTAACCTAAAACAGTCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACGACCACGGGTGGTAACGCAC
TTAAATTCTACGCTTCTGTTCGTCTTGATATTCGTCGTACTGGCGCAATCAAAGAAGGTGACGAAGTCGTTGGTAACGAA
ACTCGCATCAAAGTAGTTAAGAACAAGATTGCTGCACCGTTTAAAGAAGCCAATACGCAAATCATGTACGGCCAAGGCTT
TAACCGCGAAGGTGAGCTGGTAGATCTAGGTGTGAAGCACAAGCTGGTTGAAAAGGCTGGTGCTTGGTACAGCTACCAAG
GCGATAAGATTGGTCAAGGTAAAGCGAACGCGTGCAACTACCTACGTGAGCATCCTGAAGTGGCTAAAACTATCGATACT
AAATTGCGTGAAATGTTGTTAGCGCCAGCCCTTGCGGAAGCTCCTGAAGCAGGCGAGGCGCCTGAGCAAGCTGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	94.529	94.813	0.896
recA	Vibrio cholerae O1 biovar El Tor strain E7946	94.529	94.813	0.896
recA	Acinetobacter baylyi ADP1	71.594	99.424	0.712
recA	Acinetobacter baumannii D1279779	74.924	94.236	0.706
recA	Pseudomonas stutzeri DSM 10701	74.312	94.236	0.7
recA	Glaesserella parasuis strain SC1401	70.37	93.372	0.657
recA	Neisseria gonorrhoeae MS11	64.756	100	0.651
recA	Neisseria gonorrhoeae MS11	64.756	100	0.651
recA	Neisseria gonorrhoeae strain FA1090	64.756	100	0.651
recA	Ralstonia pseudosolanacearum GMI1000	70.418	89.625	0.631
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.184	98.847	0.585
recA	Helicobacter pylori strain NCTC11637	61.774	94.236	0.582
recA	Helicobacter pylori 26695	61.468	94.236	0.579
recA	Streptococcus pneumoniae D39	62.229	93.084	0.579
recA	Streptococcus pneumoniae TIGR4	62.229	93.084	0.579
recA	Streptococcus pneumoniae R6	62.229	93.084	0.579
recA	Streptococcus pneumoniae Rx1	62.229	93.084	0.579
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	92.507	0.576
recA	Latilactobacillus sakei subsp. sakei 23K	59.581	96.254	0.573
recA	Streptococcus mitis SK321	61.61	93.084	0.573
recA	Streptococcus pyogenes NZ131	60.923	93.66	0.571
recA	Streptococcus mitis NCTC 12261	61.3	93.084	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.159	95.965	0.568
recA	Streptococcus mutans UA159	60.308	93.66	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.372	93.084	0.562