Detailed information NTG1054825

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BCT87_RS04340
• Genome accession: NZ_CP170031
• Coordinates: 1042646..1043686 (-)
• Length: 346 a.a.
• NCBI ID: WP_010435812.1
• Uniprot ID: -
• Organism: Vibrio cyclitrophicus strain 10N.261.52.C4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1037646..1048686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCT87_RS04325 (BCT87_04325)	csrA	1038043..1038240 (-)	198	WP_009847619.1	carbon storage regulator CsrA	-
BCT87_RS04330 (BCT87_04330)	-	1038333..1039514 (-)	1182	WP_010435816.1	aspartate kinase	-
BCT87_RS04335 (BCT87_04335)	alaS	1039735..1042317 (-)	2583	WP_016790038.1	alanine--tRNA ligase	-
BCT87_RS04340 (BCT87_04340)	recA	1042646..1043686 (-)	1041	WP_010435812.1	recombinase RecA	Machinery gene
BCT87_RS04345 (BCT87_04345)	pncC	1043826..1044320 (-)	495	WP_016768194.1	nicotinamide-nucleotide amidase	-
BCT87_RS04350 (BCT87_04350)	mutS	1044444..1047005 (+)	2562	WP_016768193.1	DNA mismatch repair protein MutS	-
BCT87_RS04355 (BCT87_04355)	rpoS	1047115..1048095 (-)	981	WP_010435803.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37229.75 Da
• Isoelectric Point: 4.9843

>NTDB_id=1054825 BCT87_RS04340 WP_010435812.1 1042646..1043686(-) (recA) [Vibrio cyclitrophicus strain 10N.261.52.C4]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVALEIDT
KLRELLLTPAVLEEKGAEKEEESEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=1054825 BCT87_RS04340 WP_010435812.1 1042646..1043686(-) (recA) [Vibrio cyclitrophicus strain 10N.261.52.C4]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAACAATTTGGTAAAGGTTCGATCATGCG
TCTTGGTGACAACCGCACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCCTTCCAATGGGTCGTATCGTTGAAGTTTACGGCCCAGAATCATCAGGTAAAACAACGTTAACGCTTGAGCTTATTGCT
GCAGCACAGAAAGTAGGTAAAACGTGTGCATTCGTTGATGCGGAGCACGCACTTGACCCTATTTACGCTCAGAAGCTTGG
TGTTGATATCGACGCGCTTCTTGTTTCTCAACCTGATACGGGTGAGCAAGCATTAGAAATCTGTGACGCTCTAGCTCGTT
CAGGTGCTATCGACGTTCTTGTTATTGACTCAGTAGCTGCACTGACACCTAAAGCGGAAATTGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTAACAGGTAACCTTAAGCAGTCTAATTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAGATTGGTGTGATGTTCGGTAATCCAGAAACAACAACTGGTGGTAATGCGC
TTAAGTTCTACGCATCTGTTCGTCTTGATATTCGCCGTACAGGTGCGATTAAGGATGGTGATGAAGTTGTTGGTAATGAA
ACGCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAAACTCAAATTCTTTATGGCAAAGGCTT
CAACCGTGAAGGCGAGCTTATCGACCTAGGTGTTAAGAATAAGCTAGTAGAAAAAGCAGGCGCTTGGTACAGCTACAAGG
GCGACAAGATTGGTCAAGGTAAAGCTAACGCTGGTAAATACCTACGTGAAAACCCAGAGGTTGCTCTTGAGATTGATACT
AAACTTCGTGAGTTGTTATTAACTCCTGCTGTTCTTGAAGAGAAGGGCGCAGAGAAAGAAGAAGAAAGCGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.97	95.087	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.97	95.087	0.855
recA	Pseudomonas stutzeri DSM 10701	76.133	95.665	0.728
recA	Acinetobacter baumannii D1279779	72.254	100	0.723
recA	Acinetobacter baylyi ADP1	71.676	100	0.717
recA	Neisseria gonorrhoeae MS11	66.954	100	0.673
recA	Neisseria gonorrhoeae MS11	66.954	100	0.673
recA	Neisseria gonorrhoeae strain FA1090	66.954	100	0.673
recA	Glaesserella parasuis strain SC1401	67.442	99.422	0.671
recA	Ralstonia pseudosolanacearum GMI1000	71.429	91.04	0.65
recA	Streptococcus mutans UA159	58.453	100	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	92.197	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.775	0.584
recA	Streptococcus pneumoniae D39	61.92	93.353	0.578
recA	Streptococcus mitis SK321	61.92	93.353	0.578
recA	Streptococcus pneumoniae Rx1	61.92	93.353	0.578
recA	Streptococcus pneumoniae R6	61.92	93.353	0.578
recA	Streptococcus pneumoniae TIGR4	61.92	93.353	0.578
recA	Helicobacter pylori strain NCTC11637	61.538	93.931	0.578
recA	Helicobacter pylori 26695	61.231	93.931	0.575
recA	Streptococcus mitis NCTC 12261	61.61	93.353	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	58.529	98.266	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.665	0.572
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.775	0.569
recA	Streptococcus pyogenes NZ131	60.308	93.931	0.566
recA	Lactococcus lactis subsp. cremoris KW2	59.443	93.353	0.555