Detailed information NTG1045001

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACEPSN_RS04115
• Genome accession: NZ_CP168691
• Coordinates: 878844..879977 (+)
• Length: 377 a.a.
• NCBI ID: WP_395345568.1
• Uniprot ID: -
• Organism: Levilactobacillus parabrevis strain FUA 30081
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 873844..884977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEPSN_RS04100	-	875222..876163 (+)	942	WP_395321106.1	RodZ domain-containing protein	-
ACEPSN_RS04105	pgsA	876234..876821 (+)	588	WP_395345566.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACEPSN_RS04110	cinA	877504..878754 (+)	1251	WP_395321105.1	competence/damage-inducible protein A	Machinery gene
ACEPSN_RS04115	recA	878844..879977 (+)	1134	WP_395345568.1	recombinase RecA	Machinery gene
ACEPSN_RS04120	rny	880202..881761 (+)	1560	WP_125701175.1	ribonuclease Y	-
ACEPSN_RS04125	-	882050..882847 (+)	798	WP_395321103.1	TIGR00282 family metallophosphoesterase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40389.82 Da
• Isoelectric Point: 6.7578

>NTDB_id=1045001 ACEPSN_RS04115 WP_395345568.1 878844..879977(+) (recA) [Levilactobacillus parabrevis strain FUA 30081]
MADERQAALDKALKKIEKDFGKGSIMRLGDNTNMQVETVPSGSLALDVALGVGGYPRGRIVEIYGPESSGKTTVALHAVA
EVQKRGGTAAYIDAENALDPAYATALGVNIDSLLLSQPDTGEQGLEIADALISSGAVDIVVVDSVAALVPRAEIEGEMGD
AHVGLQARMMSQALRKLSGSINKTKTIALFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQIKDGTDVIGNR
TRIKVVKNKVASPFKRAEVDIMYGQGISQTGELLDMAVEKDIVDKSGSWYSYGEDRIGQGRENAKKYLADHPDMMAEVNT
RVRTAYGVNVDGDEAPAPKKDDATKTDATKDASKSKKDGKKPATQQSELIPNKPQGK

Nucleotide

• Length: 1134 bp

>NTDB_id=1045001 ACEPSN_RS04115 WP_395345568.1 878844..879977(+) (recA) [Levilactobacillus parabrevis strain FUA 30081]
ATGGCTGACGAACGACAAGCGGCGCTGGACAAAGCGCTGAAGAAAATTGAAAAAGACTTTGGTAAGGGCTCCATTATGCG
GTTAGGTGACAACACCAATATGCAGGTGGAGACTGTGCCTTCTGGCTCGTTAGCCCTTGATGTGGCTTTGGGAGTCGGTG
GCTATCCTCGTGGACGAATCGTAGAAATCTACGGACCAGAATCTTCAGGGAAGACCACGGTAGCTTTGCACGCGGTCGCT
GAAGTTCAGAAGCGGGGCGGAACAGCAGCTTATATTGATGCTGAAAACGCCTTGGATCCAGCCTACGCAACAGCGTTGGG
TGTCAACATCGATAGCCTCTTGCTGTCACAACCAGATACTGGTGAACAAGGGCTGGAAATTGCGGATGCTCTGATTTCTA
GTGGTGCCGTTGACATTGTGGTCGTGGATTCCGTGGCCGCATTGGTTCCTCGAGCTGAAATCGAAGGTGAAATGGGGGAC
GCCCACGTGGGGTTACAAGCACGGATGATGTCCCAAGCTTTACGGAAGCTCTCTGGTTCAATCAACAAAACAAAGACGAT
TGCCCTGTTTATTAACCAAATTCGGGAAAAAGTTGGAGTTATGTTTGGTAACCCTGAAACCACGCCTGGTGGTCGGGCAC
TGAAGTTCTACGCAACGGTTCGGTTGGAAGTTCGCCGGGCGGAACAGATCAAGGACGGAACCGATGTTATCGGGAACCGG
ACACGGATCAAAGTCGTTAAGAACAAGGTGGCTTCACCATTCAAACGGGCTGAAGTCGACATCATGTATGGTCAAGGGAT
TTCCCAGACCGGTGAACTCTTAGACATGGCGGTTGAAAAAGACATCGTTGATAAGAGTGGGTCTTGGTACTCTTATGGTG
AAGACCGGATTGGTCAAGGACGTGAAAATGCCAAGAAGTATCTGGCTGATCACCCTGACATGATGGCTGAAGTTAATACG
CGGGTTCGAACAGCGTATGGAGTTAACGTCGATGGTGACGAGGCGCCAGCTCCTAAGAAGGATGACGCCACAAAGACTGA
TGCCACCAAGGACGCGTCAAAGTCCAAGAAGGATGGCAAGAAGCCAGCAACGCAACAAAGTGAATTGATTCCCAACAAGC
CACAAGGCAAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	84.412	90.186	0.761
recA	Bacillus subtilis subsp. subtilis str. 168	75	88.064	0.66
recA	Streptococcus mitis SK321	70.17	93.369	0.655
recA	Streptococcus mitis NCTC 12261	70.17	93.369	0.655
recA	Streptococcus pneumoniae R6	69.101	94.43	0.653
recA	Streptococcus pneumoniae Rx1	69.101	94.43	0.653
recA	Streptococcus pneumoniae D39	69.101	94.43	0.653
recA	Streptococcus pneumoniae TIGR4	69.101	94.43	0.653
recA	Streptococcus mutans UA159	67.787	94.695	0.642
recA	Streptococcus pyogenes NZ131	71.903	87.798	0.631
recA	Lactococcus lactis subsp. cremoris KW2	70.517	87.268	0.615
recA	Vibrio cholerae strain A1552	64.087	85.676	0.549
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.087	85.676	0.549
recA	Neisseria gonorrhoeae MS11	59.357	90.716	0.538
recA	Neisseria gonorrhoeae strain FA1090	59.357	90.716	0.538
recA	Neisseria gonorrhoeae MS11	59.357	90.716	0.538
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.774	86.737	0.536
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.846	86.207	0.533
recA	Ralstonia pseudosolanacearum GMI1000	63.694	83.289	0.531
recA	Acinetobacter baumannii D1279779	58.017	90.981	0.528
recA	Acinetobacter baylyi ADP1	61.3	85.676	0.525
recA	Glaesserella parasuis strain SC1401	59.021	86.737	0.512
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.359	87.268	0.509
recA	Pseudomonas stutzeri DSM 10701	59.443	85.676	0.509
recA	Helicobacter pylori strain NCTC11637	56.707	87.003	0.493
recA	Helicobacter pylori 26695	56.707	87.003	0.493