Detailed information NTG1038342

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QMX76_RS11770
• Genome accession: NZ_OX411212
• Coordinates: 2377999..2379354 (-)
• Length: 451 a.a.
• NCBI ID: WP_205455587.1
• Uniprot ID: -
• Organism: Vibrio campbellii isolate BF5_0283
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2372999..2384354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMX76_RS11750	bioB	2373536..2374588 (-)	1053	WP_005378222.1	biotin synthase BioB	-
QMX76_RS11755	bioA	2374719..2375996 (+)	1278	WP_228174080.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
QMX76_RS11760	-	2376181..2376402 (-)	222	WP_282249424.1	DksA/TraR family C4-type zinc finger protein	-
QMX76_RS11765	serS	2376599..2377906 (-)	1308	WP_012127605.1	serine--tRNA ligase	-
QMX76_RS11770	rarA	2377999..2379354 (-)	1356	WP_205455587.1	replication-associated recombination protein A	Machinery gene
QMX76_RS11775	lolA	2379355..2379981 (-)	627	WP_282249425.1	outer membrane lipoprotein chaperone LolA	-
QMX76_RS11780	-	2380043..2383333 (-)	3291	WP_282249426.1	DNA translocase FtsK 4TM domain-containing protein	-
QMX76_RS11785	lrp	2383486..2383980 (-)	495	WP_005528862.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50030.48 Da
• Isoelectric Point: 5.5038

>NTDB_id=1038342 QMX76_RS11770 WP_205455587.1 2377999..2379354(-) (rarA) [Vibrio campbellii isolate BF5_0283]
MVVSNYTLDFSGDEDFRPLAARMRPETIEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYANAE
VERVSAVTSGVKEIRAAIEKARENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRA
RVYKLTSLDKDEISLALNQAISDKERGLGNTPAHFVDNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLL
AEVAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSA
WDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYVAWKQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRYAHDEPG
AYAAGEQYLPPEMGDRRYYQPTNRGLETKIGEKLDYLATLDANSPQKRYEK

Nucleotide

• Length: 1356 bp

>NTDB_id=1038342 QMX76_RS11770 WP_205455587.1 2377999..2379354(-) (rarA) [Vibrio campbellii isolate BF5_0283]
TTGGTAGTGAGCAATTACACATTAGATTTCTCGGGGGACGAAGATTTTCGTCCCCTTGCTGCTCGTATGAGACCGGAAAC
GATCGAACAATACATCGGACAGCAGCATATTTTAGGTCCAGGTAAGCCACTACGCCGTGCGCTAGAGGCTGGTCATATTC
ACTCTATGATCCTTTGGGGACCCCCAGGCACAGGTAAGACGACGTTGGCAGAAGTGGCAGCAAACTATGCTAATGCAGAA
GTTGAGCGTGTGTCTGCGGTGACGTCTGGCGTGAAAGAAATTCGTGCTGCAATTGAGAAAGCGCGTGAGAACAAAATGGC
GGGTCGCCGCACCATCTTATTTGTGGATGAGGTGCACCGCTTCAACAAGTCTCAACAAGACGCGTTTTTACCGCATATCG
AAGATGGCACCGTTACCTTTATTGGTGCGACGACAGAAAACCCATCGTTTGAGTTAAACAACGCACTGCTGTCACGTGCG
CGTGTGTACAAGTTAACATCTCTCGATAAAGATGAAATCTCACTGGCGTTGAACCAAGCCATTAGCGATAAAGAGCGTGG
GCTGGGTAATACGCCTGCACACTTCGTTGATAACGTATTAGATCGCTTAGCAGAACTGGTAAACGGTGATGCTCGCATGT
CTCTCAACTATCTTGAGCTGCTCTACGACATGGCAGAGGATAATGCGCAGGGCGAAAAAGAAATCACGCTTAAGTTGCTT
GCGGAAGTAGCAGGGGAGAAAGTCTCTCGCTTCGATAACAAAGGCGACATTTGGTACGACTTAATCTCTGCTGTACACAA
GTCGATTCGTGGCTCTAACCCTGATGCCGCGCTTTACTGGGCTGCACGTATGATCGCAGCAGGTTGCGACCCTTTGTACA
TTGCTCGCCGACTACTGGCGATTGCCTCTGAAGATGTGGGTAATGCTGACCCTCGCGCAATGCAAGTGGCACTTTCCGCT
TGGGATTGCTTTACTCGTGTTGGTCCGGCAGAAGGTGAGCGCGCTATTGCACAGGCGATCGTGTACTTAGCATGTGCACC
AAAAAGTAATGCGGTATACGTGGCGTGGAAACAAGCGCTCACAGATGCTCATAACTTGCCTGAATATGAAGTGCCGCATC
ACCTTCGAAATGCACCGACCAGTTTGATGAAAGACATGGGTTATGGAGCAGAGTATCGTTACGCGCACGATGAGCCTGGC
GCTTACGCCGCAGGTGAGCAATATTTGCCGCCTGAAATGGGTGATCGTAGGTACTATCAGCCGACAAATCGTGGTCTAGA
GACCAAAATCGGCGAAAAGTTAGATTACTTGGCTACTTTAGACGCAAATAGCCCACAAAAGCGCTATGAAAAGTAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (192-270)

• ATPase family associated with various cellular activities (AAA) (AAA) (56-161)

• MgsA AAA+ ATPase C terminal (MgsA_C) (271-437)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.48	93.792	0.37