Detailed information NTG0103526

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: QUF19_RS14420
• Genome accession: NZ_AP028067
• Coordinates: 3254289..3255329 (-)
• Length: 346 a.a.
• NCBI ID: WP_029223240.1
• Uniprot ID: A0A1R3EA59
• Organism: Vibrio sp. FE10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3249289..3260329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUF19_RS14400	-	3251335..3251823 (-)	489	WP_286294740.1	hypothetical protein	-
QUF19_RS14405	tpx	3252034..3252540 (-)	507	WP_102435551.1	thiol peroxidase	-
QUF19_RS14410	-	3252711..3252989 (-)	279	WP_286294741.1	hypothetical protein	-
QUF19_RS14415	-	3253169..3254131 (+)	963	WP_286294742.1	winged helix-turn-helix domain-containing protein	-
QUF19_RS14420	recA	3254289..3255329 (-)	1041	WP_029223240.1	recombinase RecA	Machinery gene
QUF19_RS14425	pncC	3255469..3255963 (-)	495	WP_286294743.1	nicotinamide-nucleotide amidase	-
QUF19_RS14430	mutS	3256087..3258648 (+)	2562	WP_286294744.1	DNA mismatch repair protein MutS	-
QUF19_RS14435	rpoS	3258793..3259773 (-)	981	WP_029223238.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37322.85 Da
• Isoelectric Point: 5.0836

>NTDB_id=103526 QUF19_RS14420 WP_029223240.1 3254289..3255329(-) (recA) [Vibrio sp. FE10]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKSNSCKHLRENPEIALELDT
KLRELLLTPAVLEEKGAEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=103526 QUF19_RS14420 WP_029223240.1 3254289..3255329(-) (recA) [Vibrio sp. FE10]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCGATCATGCG
TCTTGGTGATAACCGTACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTGGGTGCTGGTG
GCCTACCGATGGGACGTATCGTTGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCGCAGAAAGTAGGCAAAACGTGTGCATTCGTTGATGCGGAACACGCACTTGACCCTATCTACGCTCAAAAGCTTGG
TGTTGATATCGATGCTTTGCTTGTATCTCAACCAGATACGGGGGAACAAGCTCTAGAAATCTGTGATGCATTGGCTCGTT
CAGGTGCTATTGATGTTCTTGTTATTGACTCGGTTGCTGCACTAACACCTAAAGCTGAGATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAAGCACGTATGCTTTCTCAAGCAATGCGTAAGCTAACAGGTAACCTTAAGCAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATCCGTATGAAGATTGGTGTAATGTTTGGTAACCCAGAAACAACAACAGGTGGTAATGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATCCGCCGTACTGGTGCAATCAAAGATGGTGATGAAGTTGTTGGTAACGAG
ACTCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAAACTCAAATCCTTTACGGTAAAGGCTT
CAACCGCGAAGGTGAGCTTATCGATTTAGGTGTTAAGAATAAGCTAGTAGAGAAAGCGGGCGCTTGGTACAGCTACAAAG
GCGACAAGATCGGCCAAGGTAAATCGAACTCTTGTAAGCACCTACGTGAAAACCCAGAGATCGCTCTGGAACTTGACACT
AAGCTTCGTGAATTGCTACTGACTCCTGCTGTTCTTGAAGAGAAAGGCGCAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A1R3EA59

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.97	95.087	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.97	95.087	0.855
recA	Pseudomonas stutzeri DSM 10701	75.227	95.665	0.72
recA	Acinetobacter baumannii D1279779	72.174	99.711	0.72
recA	Acinetobacter baylyi ADP1	71.387	100	0.714
recA	Neisseria gonorrhoeae MS11	66.954	100	0.673
recA	Neisseria gonorrhoeae MS11	66.954	100	0.673
recA	Neisseria gonorrhoeae strain FA1090	66.954	100	0.673
recA	Glaesserella parasuis strain SC1401	67.442	99.422	0.671
recA	Ralstonia pseudosolanacearum GMI1000	71.111	91.04	0.647
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.95	92.197	0.59
recA	Streptococcus mutans UA159	58.166	100	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.775	0.581
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	95.665	0.575
recA	Helicobacter pylori strain NCTC11637	60.923	93.931	0.572
recA	Streptococcus pneumoniae TIGR4	61.3	93.353	0.572
recA	Streptococcus pneumoniae R6	61.3	93.353	0.572
recA	Streptococcus pneumoniae D39	61.3	93.353	0.572
recA	Streptococcus pneumoniae Rx1	61.3	93.353	0.572
recA	Streptococcus mitis NCTC 12261	60.991	93.353	0.569
recA	Helicobacter pylori 26695	60.615	93.931	0.569
recA	Latilactobacillus sakei subsp. sakei 23K	57.647	98.266	0.566
recA	Streptococcus mitis SK321	60.681	93.353	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.748	92.775	0.564
recA	Streptococcus pyogenes NZ131	59.385	93.931	0.558
recA	Lactococcus lactis subsp. cremoris KW2	58.204	93.353	0.543