Detailed information NTG1016701

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABW387_RS09285
• Genome accession: NZ_CP159911
• Coordinates: 2117714..2118763 (+)
• Length: 349 a.a.
• NCBI ID: WP_025329915.1
• Uniprot ID: A0A1X0TJP5
• Organism: Snodgrassella alvi strain Amel02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2112714..2123763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABW387_RS09255 (ABW387_18360)	-	2112887..2114305 (-)	1419	WP_370385789.1	exonuclease domain-containing protein	-
ABW387_RS09270 (ABW387_00755)	-	2114807..2115535 (-)	729	WP_370385790.1	SIMPL domain-containing protein	-
ABW387_RS09280 (ABW387_00745)	-	2116047..2117283 (-)	1237	Protein_1791	DEAD/DEAH box helicase	-
ABW387_RS09285 (ABW387_00740)	recA	2117714..2118763 (+)	1050	WP_025329915.1	recombinase RecA	Machinery gene
ABW387_RS09290 (ABW387_00735)	trpE	2119074..2120549 (+)	1476	WP_370385791.1	anthranilate synthase component I	-
ABW387_RS09295 (ABW387_00730)	modD	2120685..2121530 (-)	846	WP_370385792.1	ModD protein	-
ABW387_RS09300 (ABW387_18365)	-	2121628..2123361 (-)	1734	WP_078474536.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37677.06 Da
• Isoelectric Point: 4.7460

>NTDB_id=1016701 ABW387_RS09285 WP_025329915.1 2117714..2118763(+) (recA) [Snodgrassella alvi strain Amel02]
MSDEKSKALAAALAQIEKNFGKGSIMKMDGSHTDENLEVISTGSLGLDLALGVGGLPRGRIVEIYGPESSGKTTLCLEAI
AQCQKDGGVCAFIDAENAFDPIYARKLGVKVEELLVSQPDTGEQALEICDMLVRSGGVDMVVVDSVAALVPKAEIEGEMG
DSHVGLQARLMSQALRKLTGNIKKTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRKIGQIKKGDDVIGN
ETRVKVIKNKVAPPFKQAEFDILYGEGISWEGELIDIGVKLGIVEKSGAWYSYNGSKIGQGKDNVRQWLKDNQEIADEIN
LKIRNKVGITAQNTEGQLDDTDGEMPAED

Nucleotide

• Length: 1050 bp

>NTDB_id=1016701 ABW387_RS09285 WP_025329915.1 2117714..2118763(+) (recA) [Snodgrassella alvi strain Amel02]
ATGTCAGATGAAAAAAGCAAGGCTTTGGCTGCGGCACTGGCGCAGATAGAAAAGAATTTTGGTAAAGGTTCCATCATGAA
AATGGATGGCAGCCATACCGATGAAAATCTCGAAGTAATCTCTACCGGTTCACTCGGACTGGATCTGGCTCTGGGTGTGG
GTGGTTTACCACGTGGTCGTATCGTAGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGTTGTGTCTGGAAGCCATA
GCACAGTGTCAGAAAGATGGTGGTGTATGTGCGTTTATCGATGCCGAGAATGCCTTTGACCCGATTTACGCCCGTAAACT
TGGGGTAAAAGTTGAAGAATTACTGGTATCACAACCTGACACCGGCGAACAGGCTCTGGAAATTTGTGACATGCTGGTTC
GCAGTGGCGGGGTGGACATGGTTGTTGTTGACTCGGTTGCAGCTCTGGTACCCAAGGCTGAAATTGAGGGCGAAATGGGT
GACAGTCATGTTGGTTTGCAAGCCCGTCTGATGAGTCAGGCTTTGCGTAAACTCACTGGTAACATCAAAAAAACCAATAC
TCTGGTTATTTTCATTAATCAGATTCGTATGAAAATCGGTGTCATGTTTGGTAATCCTGAAACCACTACTGGTGGTAATG
CACTGAAATTCTACTCATCTGTACGTCTGGATATCCGTAAAATCGGCCAGATTAAAAAAGGTGATGATGTCATTGGTAAT
GAAACACGCGTTAAAGTAATCAAAAACAAAGTAGCTCCGCCATTTAAACAGGCTGAGTTCGATATTTTGTATGGCGAAGG
TATCAGCTGGGAAGGTGAGTTGATTGATATCGGCGTTAAGCTAGGCATTGTTGAAAAATCAGGTGCATGGTACAGCTACA
ATGGCAGCAAAATAGGTCAGGGTAAAGACAATGTACGTCAATGGTTGAAAGATAATCAGGAAATAGCCGACGAAATTAAT
CTTAAAATTCGCAATAAAGTAGGCATCACTGCTCAGAATACCGAAGGGCAGTTGGATGATACTGATGGTGAAATGCCTGC
CGAAGACTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A1X0TJP5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	85.345	99.713	0.851
recA	Neisseria gonorrhoeae strain FA1090	85.345	99.713	0.851
recA	Neisseria gonorrhoeae MS11	85.345	99.713	0.851
recA	Ralstonia pseudosolanacearum GMI1000	75.758	94.556	0.716
recA	Pseudomonas stutzeri DSM 10701	71.94	95.989	0.691
recA	Acinetobacter baylyi ADP1	68.605	98.567	0.676
recA	Acinetobacter baumannii D1279779	68.421	97.994	0.67
recA	Glaesserella parasuis strain SC1401	71.166	93.41	0.665
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.605	92.837	0.665
recA	Vibrio cholerae strain A1552	71.605	92.837	0.665
recA	Bacillus subtilis subsp. subtilis str. 168	67.477	94.269	0.636
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.069	94.842	0.636
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.97	94.556	0.633
recA	Helicobacter pylori 26695	65.653	94.269	0.619
recA	Helicobacter pylori strain NCTC11637	65.653	94.269	0.619
recA	Latilactobacillus sakei subsp. sakei 23K	65.549	93.983	0.616
recA	Streptococcus mutans UA159	63.609	96.848	0.616
recA	Streptococcus pneumoniae D39	59.829	100	0.602
recA	Streptococcus pneumoniae R6	59.829	100	0.602
recA	Streptococcus pneumoniae Rx1	59.829	100	0.602
recA	Streptococcus pneumoniae TIGR4	59.829	100	0.602
recA	Lactococcus lactis subsp. cremoris KW2	60.35	98.281	0.593
recA	Streptococcus mitis NCTC 12261	62.424	94.556	0.59
recA	Streptococcus pyogenes NZ131	62.424	94.556	0.59
recA	Streptococcus mitis SK321	61.818	94.556	0.585
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.3	92.55	0.567