Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ABN019_RS04510 | Genome accession | NZ_CP158111 |
| Coordinates | 928537..929589 (+) | Length | 350 a.a. |
| NCBI ID | WP_005688671.1 | Uniprot ID | A0A508YW64 |
| Organism | Lacticaseibacillus rhamnosus strain BIM B-189 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 902491..954254 | 928537..929589 | within | 0 |
Gene organization within MGE regions
Location: 902491..954254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABN019_RS04380 (ABN019_04385) | - | 902561..902827 (+) | 267 | WP_005687240.1 | ACT domain-containing protein | - |
| ABN019_RS04385 (ABN019_04390) | - | 902982..904325 (+) | 1344 | WP_005688634.1 | PFL family protein | - |
| ABN019_RS04390 (ABN019_04395) | - | 904492..905559 (+) | 1068 | WP_014571209.1 | competence protein CoiA family protein | - |
| ABN019_RS04395 (ABN019_04400) | - | 905800..906435 (-) | 636 | WP_005687248.1 | DsbA family protein | - |
| ABN019_RS04400 (ABN019_04405) | - | 906505..907098 (-) | 594 | WP_005688639.1 | CYTH domain-containing protein | - |
| ABN019_RS04405 (ABN019_04410) | - | 907265..907942 (+) | 678 | WP_005713649.1 | GTP pyrophosphokinase family protein | - |
| ABN019_RS04410 (ABN019_04415) | - | 907944..908741 (+) | 798 | WP_005687253.1 | NAD kinase | - |
| ABN019_RS04415 (ABN019_04420) | - | 908741..909643 (+) | 903 | WP_005688644.1 | RluA family pseudouridine synthase | - |
| ABN019_RS04420 (ABN019_04425) | - | 909787..910845 (-) | 1059 | WP_005688645.1 | FAD:protein FMN transferase | - |
| ABN019_RS04425 (ABN019_04430) | - | 911062..911700 (-) | 639 | WP_005688646.1 | copper homeostasis protein CutC | - |
| ABN019_RS04430 (ABN019_04435) | - | 911720..912538 (-) | 819 | WP_005688647.1 | undecaprenyl-diphosphate phosphatase | - |
| ABN019_RS04435 (ABN019_04440) | - | 912743..913783 (-) | 1041 | WP_005688649.1 | lactonase family protein | - |
| ABN019_RS04440 (ABN019_04445) | - | 914027..914401 (+) | 375 | WP_005688651.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| ABN019_RS04445 (ABN019_04450) | rpsN | 914451..914720 (-) | 270 | WP_003564153.1 | 30S ribosomal protein S14 | - |
| ABN019_RS04450 (ABN019_04455) | - | 914835..915812 (-) | 978 | WP_014571210.1 | GMP reductase | - |
| ABN019_RS04455 (ABN019_04460) | - | 916008..916955 (-) | 948 | WP_005688655.1 | magnesium transporter CorA family protein | - |
| ABN019_RS04460 (ABN019_04465) | - | 917021..917863 (+) | 843 | WP_005688657.1 | methyltransferase domain-containing protein | - |
| ABN019_RS04465 (ABN019_04470) | trmL | 918349..918858 (+) | 510 | WP_005688659.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| ABN019_RS04470 (ABN019_04475) | - | 918882..919289 (+) | 408 | WP_005687267.1 | DUF1149 family protein | - |
| ABN019_RS04475 (ABN019_04480) | - | 919815..922115 (+) | 2301 | WP_014571214.1 | DNA translocase FtsK | - |
| ABN019_RS04480 (ABN019_04485) | - | 922124..923386 (+) | 1263 | WP_014571215.1 | pitrilysin family protein | - |
| ABN019_RS04485 (ABN019_04490) | - | 923383..924675 (+) | 1293 | WP_005688664.1 | pitrilysin family protein | - |
| ABN019_RS04490 (ABN019_04495) | - | 924675..925403 (+) | 729 | WP_005688666.1 | SDR family oxidoreductase | - |
| ABN019_RS04495 (ABN019_04500) | - | 925490..926425 (+) | 936 | WP_005688668.1 | helix-turn-helix domain-containing protein | - |
| ABN019_RS04500 (ABN019_04505) | pgsA | 926422..927015 (+) | 594 | WP_005688184.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ABN019_RS04505 (ABN019_04510) | cinA | 927244..928485 (+) | 1242 | WP_005688669.1 | competence/damage-inducible protein A | Machinery gene |
| ABN019_RS04510 (ABN019_04515) | recA | 928537..929589 (+) | 1053 | WP_005688671.1 | recombinase RecA | Machinery gene |
| ABN019_RS04515 (ABN019_04520) | rny | 930214..931785 (+) | 1572 | WP_005684479.1 | ribonuclease Y | - |
| ABN019_RS04520 (ABN019_04525) | - | 931874..932530 (-) | 657 | WP_024129572.1 | YigZ family protein | - |
| ABN019_RS04525 (ABN019_04530) | - | 932558..933823 (+) | 1266 | WP_014571217.1 | DEAD/DEAH box helicase | - |
| ABN019_RS04530 (ABN019_04535) | - | 933982..934500 (+) | 519 | WP_005688681.1 | ComF family protein | - |
| ABN019_RS04535 (ABN019_04540) | raiA | 934625..935182 (+) | 558 | WP_005684485.1 | ribosome-associated translation inhibitor RaiA | - |
| ABN019_RS04540 (ABN019_04545) | secA | 935766..938129 (+) | 2364 | WP_005688686.1 | preprotein translocase subunit SecA | - |
| ABN019_RS04545 (ABN019_04550) | prfB | 938270..939386 (+) | 1117 | WP_154243967.1 | peptide chain release factor 2 | - |
| ABN019_RS04550 (ABN019_04555) | ftsE | 939463..940149 (+) | 687 | WP_005684489.1 | cell division ATP-binding protein FtsE | - |
| ABN019_RS04555 (ABN019_04560) | ftsX | 940139..941026 (+) | 888 | WP_005684490.1 | permease-like cell division protein FtsX | - |
| ABN019_RS04560 (ABN019_04565) | - | 941297..942394 (+) | 1098 | WP_014571221.1 | PDZ domain-containing protein | - |
| ABN019_RS04565 (ABN019_04570) | - | 942391..943095 (+) | 705 | WP_005688690.1 | response regulator transcription factor | - |
| ABN019_RS04570 (ABN019_04575) | - | 943088..943957 (+) | 870 | Protein_870 | PAS domain-containing protein | - |
| ABN019_RS04575 (ABN019_04580) | - | 944022..945038 (-) | 1017 | WP_019728331.1 | IS30 family transposase | - |
| ABN019_RS04580 (ABN019_04585) | - | 945141..945947 (+) | 807 | Protein_872 | ATP-binding protein | - |
| ABN019_RS04585 (ABN019_04590) | - | 946037..946903 (+) | 867 | WP_005688693.1 | phosphate ABC transporter substrate-binding protein PstS family protein | - |
| ABN019_RS04590 (ABN019_04595) | pstC | 947051..947974 (+) | 924 | WP_005684497.1 | phosphate ABC transporter permease subunit PstC | - |
| ABN019_RS04595 (ABN019_04600) | pstA | 947971..948855 (+) | 885 | WP_005684499.1 | phosphate ABC transporter permease PstA | - |
| ABN019_RS04600 (ABN019_04605) | pstB | 948926..949744 (+) | 819 | WP_014571222.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ABN019_RS04605 (ABN019_04610) | pstB | 949754..950518 (+) | 765 | WP_005684501.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| ABN019_RS04610 (ABN019_04615) | phoU | 950529..951206 (+) | 678 | WP_005684502.1 | phosphate signaling complex protein PhoU | - |
| ABN019_RS04615 (ABN019_04620) | liaX | 951913..953403 (+) | 1491 | WP_005688699.1 | daptomycin-sensing surface protein LiaX | - |
| ABN019_RS04620 (ABN019_04625) | - | 953415..953675 (+) | 261 | WP_005688700.1 | hypothetical protein | - |
| ABN019_RS04625 (ABN019_04630) | - | 953678..954013 (+) | 336 | WP_005684507.1 | phage holin family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 37574.81 Da Isoelectric Point: 5.5040
>NTDB_id=1009756 ABN019_RS04510 WP_005688671.1 928537..929589(+) (recA) [Lacticaseibacillus rhamnosus strain BIM B-189]
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAV
AMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGN
RTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDIIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIE
KQVRLAYGMSPDHVIDQADTETDTTTSAAS
MAETERQEALATALKKIEKNFGKGAIMRMGDKVETRVSAVSSGSLAIDDALGVGGLPRGRIVEIYGPESSGKTTVALHAV
AMVQQHGGTAAYIDAENAMDPKYAAALGVNIDELLLSQPDTGEQGLEIADELVASGAIDILVVDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGAINKTKTIALFINQIREKVGIVFGNPEITPGGRALKFYATVRMEVRRSEQIKNGADIIGN
RTKIKVVKNKVAPPFKTAIVDIMYGQGISQSGELVDMAVEKDIIEKAGSWYAYQGERIGQGREHAKSYLETHEELRRTIE
KQVRLAYGMSPDHVIDQADTETDTTTSAAS
Nucleotide
Download Length: 1053 bp
>NTDB_id=1009756 ABN019_RS04510 WP_005688671.1 928537..929589(+) (recA) [Lacticaseibacillus rhamnosus strain BIM B-189]
ATGGCAGAAACCGAACGACAGGAAGCATTGGCAACGGCGTTAAAGAAGATTGAGAAGAATTTTGGCAAAGGGGCCATTAT
GCGGATGGGGGACAAAGTGGAGACACGCGTTTCTGCTGTTTCCAGCGGATCACTTGCAATTGATGATGCACTTGGTGTTG
GTGGGCTGCCACGTGGACGAATTGTTGAAATCTATGGTCCGGAAAGTTCCGGAAAAACGACTGTGGCCTTGCATGCAGTT
GCCATGGTTCAGCAACACGGTGGCACGGCCGCTTATATTGATGCCGAAAATGCCATGGATCCCAAATATGCAGCGGCACT
TGGCGTCAATATTGATGAGCTGTTGCTTTCACAGCCGGATACCGGTGAACAAGGATTGGAAATTGCCGATGAGCTGGTTG
CATCGGGAGCCATTGATATTTTAGTGGTTGATTCAGTGGCAGCTCTGGTACCGCGCGCAGAAATTGAAGGGGACATGGGT
GATGCACACGTTGGGTTACAGGCACGGCTAATGTCACAGGCCTTACGAAAGTTGTCTGGGGCGATCAATAAAACCAAAAC
AATTGCCTTGTTCATCAACCAGATCCGGGAAAAAGTCGGTATTGTATTCGGCAATCCTGAAATTACGCCGGGCGGTCGGG
CGCTGAAGTTTTATGCCACTGTGCGTATGGAAGTGCGCCGTTCTGAGCAGATCAAAAACGGTGCCGATATTATTGGCAAT
CGCACCAAAATCAAAGTGGTTAAAAATAAAGTTGCACCGCCGTTTAAGACTGCCATTGTTGATATTATGTATGGTCAAGG
CATTTCCCAAAGCGGTGAACTTGTCGACATGGCGGTTGAAAAAGACATCATTGAAAAGGCGGGTTCGTGGTATGCCTACC
AAGGCGAGCGCATTGGTCAAGGACGTGAACACGCTAAAAGCTATCTTGAAACGCATGAGGAGCTGCGCCGAACCATTGAA
AAACAAGTCCGGCTTGCTTATGGAATGTCGCCGGATCACGTTATCGATCAAGCGGACACGGAGACAGATACTACCACATC
TGCTGCATCATGA
ATGGCAGAAACCGAACGACAGGAAGCATTGGCAACGGCGTTAAAGAAGATTGAGAAGAATTTTGGCAAAGGGGCCATTAT
GCGGATGGGGGACAAAGTGGAGACACGCGTTTCTGCTGTTTCCAGCGGATCACTTGCAATTGATGATGCACTTGGTGTTG
GTGGGCTGCCACGTGGACGAATTGTTGAAATCTATGGTCCGGAAAGTTCCGGAAAAACGACTGTGGCCTTGCATGCAGTT
GCCATGGTTCAGCAACACGGTGGCACGGCCGCTTATATTGATGCCGAAAATGCCATGGATCCCAAATATGCAGCGGCACT
TGGCGTCAATATTGATGAGCTGTTGCTTTCACAGCCGGATACCGGTGAACAAGGATTGGAAATTGCCGATGAGCTGGTTG
CATCGGGAGCCATTGATATTTTAGTGGTTGATTCAGTGGCAGCTCTGGTACCGCGCGCAGAAATTGAAGGGGACATGGGT
GATGCACACGTTGGGTTACAGGCACGGCTAATGTCACAGGCCTTACGAAAGTTGTCTGGGGCGATCAATAAAACCAAAAC
AATTGCCTTGTTCATCAACCAGATCCGGGAAAAAGTCGGTATTGTATTCGGCAATCCTGAAATTACGCCGGGCGGTCGGG
CGCTGAAGTTTTATGCCACTGTGCGTATGGAAGTGCGCCGTTCTGAGCAGATCAAAAACGGTGCCGATATTATTGGCAAT
CGCACCAAAATCAAAGTGGTTAAAAATAAAGTTGCACCGCCGTTTAAGACTGCCATTGTTGATATTATGTATGGTCAAGG
CATTTCCCAAAGCGGTGAACTTGTCGACATGGCGGTTGAAAAAGACATCATTGAAAAGGCGGGTTCGTGGTATGCCTACC
AAGGCGAGCGCATTGGTCAAGGACGTGAACACGCTAAAAGCTATCTTGAAACGCATGAGGAGCTGCGCCGAACCATTGAA
AAACAAGTCCGGCTTGCTTATGGAATGTCGCCGGATCACGTTATCGATCAAGCGGACACGGAGACAGATACTACCACATC
TGCTGCATCATGA
Similar proteins
Only experimentally validated proteins are listed.