TA loci of Escherichia coli strain EFF60
Number of TA loci:
0;
23
| TA ID | Related MGEs | Organism (replicon) | Genome accession | Toxin | Antitoxin | Family/Domain |
|---|---|---|---|---|---|---|
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS00215 (TacT2) | LMF34_RS00210 (TacA2) | tacAT/DUF1778(antitoxin) | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS03915 (Hha) | LMF34_RS03910 (TomB) | Hha-TomB/- | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS04875 (yafO) | LMF34_RS04880 (yafN) | yafN-yafO (relBE)/YafO-YafN | |
| IS/Tn | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS06440 (shpA) | LMF34_RS06435 (shpB) | shpAB/BrnT-BrnA | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS06900 (relE) | LMF34_RS06905 (relB) | relBE/ParE-RelB | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS06960 (chpB) | LMF34_RS06965 (chpS) | chpSB/PRK09812-ChpS | |
| Prophage | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS08110 (panT) | LMF34_RS08115 (panA) | PanAT/DUF4065(antitoxin) | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS08985 (higB) | LMF34_RS08980 (higA) | higBA (relBE)/HTH(antitoxin) | |
| GI | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS12920 (yhaV) | LMF34_RS12925 (prlF) | prlF-yhaV (relBE)/YhaV-PrlF | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS15030 (mazF) | LMF34_RS15025 (mazE) | mazEF/PRK09907-MazE | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS15405 (higB) | LMF34_RS15410 (higA) | higBA (relBE)/HigB-HigA | |
| - | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS19020 (yoeB) | LMF34_RS19015 (yefM) | yefM-yoeB (relBE)/YoeB-YefM | |
| Prophage IS/Tn | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS21410 (relE) | LMF34_RS21405 (relB) | relBE/ParE-RelB | |
| IS/Tn | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS21875 (hipA) | LMF34_RS21870 (hipB) | hipBA/HipA-HipB | |
| IS/Tn | Escherichia coli strain EFF60 (chromosome) | NZ_CP086678 | LMF34_RS22310 (hicA) | LMF34_RS22305 (hicB) | hicAB/UPF0150(antitoxin) | |
| Plasmid | Escherichia coli strain EFF60 (plasmid pMADE-1) | NZ_CP086679 | LMF34_RS24600 (hipA) | LMF34_RS24605 (hipB) | hipBA/HipA-HipB | |
| Plasmid IScluster/Tn | Escherichia coli strain EFF60 (plasmid pMADE-2) | NZ_CP086680 | LMF34_RS25935 (relE) | LMF34_RS25940 (relB) | relBE/ParE-DnaT | |
| Plasmid IScluster/Tn | Escherichia coli strain EFF60 (plasmid pMADE-2) | NZ_CP086680 | LMF34_RS26105 (relE) | LMF34_RS26110 (relB) | relBE/ParE-DnaT | |
| Plasmid IScluster/Tn | Escherichia coli strain EFF60 (plasmid pMADE-3) | NZ_CP086681 | LMF34_RS26330 (doc) | LMF34_RS26325 (phd) | phd-doc/Doc-Phd | |
| Plasmid | Escherichia coli strain EFF60 (plasmid pMADE-3) | NZ_CP086681 | LMF34_RS26485 (relE) | LMF34_RS26480 (relB) | relBE/ParE-YafN |