MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP086678 Location: 4459347..4460327 Organism: Escherichia coli strain EFF60 Replicon: chromosome
Accession: NZ_CP086678 Location: 4459347..4460327 Organism: Escherichia coli strain EFF60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMF34_RS21320 (4454717) | 4454717..4454908 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| LMF34_RS21325 (4454905) | 4454905..4455093 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| LMF34_RS21330 (4455661) | 4455661..4455879 | - | 219 | WP_001171942.1 | protein YdfC | - |
| LMF34_RS26920 (4455909) | 4455909..4456037 | - | 129 | WP_000344964.1 | protein YdfB | - |
| LMF34_RS21335 (4456039) | 4456039..4456194 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| LMF34_RS21340 (4456361) | 4456361..4456768 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| LMF34_RS21345 (4456852) | 4456852..4457082 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| LMF34_RS21350 (4457066) | 4457066..4457587 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| LMF34_RS21355 (4457568) | 4457568..4458533 | + | 966 | WP_248422690.1 | hypothetical protein | - |
| LMF34_RS21360 (4458574) | 4458574..4458996 | + | 423 | WP_248422691.1 | DUF977 family protein | - |
| LMF34_RS21365 (4458993) | 4458993..4459196 | + | 204 | Protein_4168 | class I SAM-dependent methyltransferase | - |
| LMF34_RS21370 (4459347) | 4459347..4460327 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| LMF34_RS21375 (4460399) | 4460399..4460681 | + | 283 | Protein_4170 | SAM-dependent methyltransferase | - |
| LMF34_RS21380 (4461159) | 4461159..4461580 | + | 422 | Protein_4171 | hypothetical protein | - |
| LMF34_RS21385 (4462235) | 4462235..4463257 | + | 1023 | Protein_4172 | ISNCY family transposase | - |
| LMF34_RS21390 (4463378) | 4463378..4463527 | + | 150 | WP_011443592.1 | protein YdfW | - |
| LMF34_RS21395 (4463964) | 4463964..4464296 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| LMF34_RS21400 (4464499) | 4464499..4464804 | - | 306 | WP_001326990.1 | protein YdfV | - |
| LMF34_RS21405 (4464829) | 4464829..4465068 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.002 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.002 |