MGE detailed information
MGE type: Genomic_island MGE length: 11452 bp
Accession: NZ_CP086678 Location: 2698322..2709773 Organism: Escherichia coli strain EFF60 Replicon: chromosome
Accession: NZ_CP086678 Location: 2698322..2709773 Organism: Escherichia coli strain EFF60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMF34_RS12890 (2693323) | 2693323..2693757 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LMF34_RS12895 (2693775) | 2693775..2694653 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LMF34_RS12900 (2694643) | 2694643..2695422 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LMF34_RS12905 (2695433) | 2695433..2695906 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LMF34_RS12910 (2695929) | 2695929..2697209 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LMF34_RS12915 (2697458) | 2697458..2698267 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| LMF34_RS12920 (2698322) | 2698322..2698786 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LMF34_RS12925 (2698786) | 2698786..2699121 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LMF34_RS12930 (2699270) | 2699270..2700841 | - | 1572 | WP_248422651.1 | galactarate dehydratase | - |
| LMF34_RS12935 (2701216) | 2701216..2702550 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LMF34_RS12940 (2702566) | 2702566..2703336 | + | 771 | WP_213847718.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LMF34_RS12945 (2703366) | 2703366..2704256 | + | 891 | WP_001377077.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LMF34_RS12950 (2704353) | 2704353..2705498 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| LMF34_RS12960 (2706298) | 2706298..2707485 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| LMF34_RS12965 (2707507) | 2707507..2708046 | - | 540 | WP_000675749.1 | protein YhaB | - |
| LMF34_RS12970 (2708302) | 2708302..2708520 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| LMF34_RS12975 (2708835) | 2708835..2709773 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LMF34_RS12980 (2709872) | 2709872..2710861 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LMF34_RS12985 (2710883) | 2710883..2712214 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| LMF34_RS12990 (2712240) | 2712240..2713448 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|