MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46324 bp
Accession: NZ_CP086680 Location: 1..46324 Organism: Escherichia coli strain EFF60 Replicon: plasmid pMADE-2
Accession: NZ_CP086680 Location: 1..46324 Organism: Escherichia coli strain EFF60 Replicon: plasmid pMADE-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMF34_RS25860 | 1..1200 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| LMF34_RS25865 | 1167..1355 | - | 189 | Protein_1 | IS91 family transposase | - |
| LMF34_RS25870 | 1467..1772 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LMF34_RS25875 | 1800..3014 | - | 1215 | WP_038977101.1 | Bicyclomycin resistance protein | ARG |
| LMF34_RS25880 | 3231..3866 | - | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| LMF34_RS25885 | 4033..4737 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LMF34_RS25890 | 4984..5457 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| LMF34_RS25895 | 5613..6725 | + | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| LMF34_RS25900 | 6671..7375 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMF34_RS25905 | 7443..7679 | + | 237 | Protein_9 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LMF34_RS25910 | 7795..7983 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| LMF34_RS25915 | 7993..9192 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| LMF34_RS25920 | 9556..9771 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| LMF34_RS25925 | 9761..10006 | - | 246 | WP_248422970.1 | hypothetical protein | - |
| LMF34_RS25930 | 10051..10374 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| LMF34_RS25935 | 10520..10801 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LMF34_RS25940 | 10791..11042 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| LMF34_RS25945 | 12298..13134 | + | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| LMF34_RS25950 | 13174..13620 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| LMF34_RS25955 | 13757..14110 | + | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| LMF34_RS25960 | 14170..15138 | - | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| LMF34_RS25965 | 15140..15433 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| LMF34_RS25970 | 15449..15679 | - | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| LMF34_RS25975 | 15731..16351 | - | 621 | WP_000864791.1 | ParA family protein | - |
| LMF34_RS25980 | 16637..17275 | + | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LMF34_RS25985 | 17674..18534 | - | 861 | WP_038976851.1 | Beta-lactamase TEM | ARG |
| LMF34_RS25990 | 18809..19514 | + | 706 | Protein_26 | IS6 family transposase IS15DII | Transposase |
| LMF34_RS25995 | 19566..19712 | + | 147 | Protein_27 | recombinase family protein | - |
| LMF34_RS26000 | 20031..20689 | - | 659 | Protein_28 | Pentapeptide repeat protein | ARG |
| LMF34_RS26005 | 21083..21264 | + | 182 | Protein_29 | transposase | - |
| LMF34_RS26010 | 21296..22001 | - | 706 | Protein_30 | IS6 family transposase IS26 | Transposase |
| LMF34_RS26015 | 22062..22851 | + | 790 | Protein_31 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LMF34_RS26020 | 22941..23183 | + | 243 | WP_000844627.1 | transposase | - |
| LMF34_RS26025 | 23215..23520 | - | 306 | Protein_33 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LMF34_RS26030 | 23523..23702 | - | 180 | Protein_34 | IS91 family transposase | - |
| LMF34_RS26035 | 23815..24121 | - | 307 | Protein_35 | putative hydrogen peroxide-inducible genes activator | VF |
| LMF34_RS26040 | 24261..25367 | - | 1107 | WP_249469357.1 | Inner membrane transport protein YdhC | ARG |
| LMF34_RS26045 | 25585..26032 | - | 448 | Protein_37 | DUF3363 domain-containing protein | - |
| LMF34_RS26050 | 26121..26222 | - | 102 | Protein_38 | DUF3363 domain-containing protein | - |
| LMF34_RS26055 | 26388..27093 | - | 706 | Protein_39 | IS6 family transposase IS15DI | Transposase |
| LMF34_RS26060 | 27340..27814 | - | 475 | Protein_40 | Dihydrofolate reductase type 1 | ARG |
| LMF34_RS26065 | 27970..29082 | + | 1113 | WP_249469359.1 | IS91 family transposase ISAzo26 | Transposase |
| LMF34_RS26070 | 29028..29734 | - | 707 | Protein_42 | IS6 family transposase IS15DII | Transposase |
| LMF34_RS26075 | 29802..30038 | + | 237 | Protein_43 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LMF34_RS26080 | 30154..30342 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| LMF34_RS26085 | 30352..31553 | + | 1202 | Protein_45 | IS91 family transposase ISSbo1 | Transposase |
| LMF34_RS26090 | 31917..32132 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| LMF34_RS26095 | 32122..32367 | - | 246 | WP_248422970.1 | hypothetical protein | - |
| LMF34_RS26100 | 32412..32735 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| LMF34_RS26105 | 32881..33162 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LMF34_RS26110 | 33152..33403 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| LMF34_RS26115 | 34659..35495 | + | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| LMF34_RS26120 | 35535..35981 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| LMF34_RS26125 | 36118..36471 | + | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| LMF34_RS26130 | 36531..37499 | - | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| LMF34_RS26135 | 37501..37794 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| LMF34_RS26140 | 37810..38040 | - | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| LMF34_RS26145 | 38092..38712 | - | 621 | WP_000864791.1 | ParA family protein | - |
| LMF34_RS26150 | 38998..39636 | + | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LMF34_RS26155 | 40035..40895 | - | 861 | WP_038976851.1 | Beta-lactamase TEM | ARG |
| LMF34_RS26160 | 41170..41875 | + | 706 | Protein_60 | IS6 family transposase IS15DI | Transposase |
| LMF34_RS26165 | 41927..42073 | + | 147 | Protein_61 | recombinase family protein | - |
| LMF34_RS26170 | 42392..43048 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| LMF34_RS26175 | 43443..43601 | + | 159 | Protein_63 | IS3 family transposase ISAs17 | Transposase |
| LMF34_RS26180 | 43654..44358 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMF34_RS26185 | 44419..45237 | + | 819 | Protein_65 | Tn3 family transposase | - |
| LMF34_RS26190 | 45295..45537 | + | 243 | WP_000844627.1 | transposase | - |
| LMF34_RS26195 | 45569..46219 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|