MGE detailed information
MGE type: Mobilizable plasmid MGE length: 135562 bp
Accession: NZ_CP086681 Location: 1..135562 Organism: Escherichia coli strain EFF60 Replicon: plasmid pMADE-3
Accession: NZ_CP086681 Location: 1..135562 Organism: Escherichia coli strain EFF60 Replicon: plasmid pMADE-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LMF34_RS26205 | 76..783 | + | 708 | WP_249469384.1 | tetratricopeptide repeat protein | - |
LMF34_RS26210 | 767..1126 | + | 360 | WP_249469374.1 | tetratricopeptide repeat protein | - |
LMF34_RS26215 | 1507..2395 | + | 889 | Protein_3 | cellulose synthase subunit BcsC-related outer membrane protein | - |
LMF34_RS26220 | 2349..2519 | + | 171 | WP_249469377.1 | hypothetical protein | - |
LMF34_RS26225 | 2710..3408 | - | 699 | Protein_5 | IS3 family transposase IS2 | Transposase |
LMF34_RS26230 | 3527..4261 | + | 735 | WP_113411679.1 | helix-turn-helix domain-containing protein | - |
LMF34_RS26235 | 4370..5067 | + | 698 | WP_227901328.1 | IS1 family transposase IS1R | Transposase |
LMF34_RS26240 | 5083..5631 | + | 549 | Protein_8 | metallophosphoesterase | - |
LMF34_RS26245 | 5628..6329 | + | 702 | WP_113411710.1 | hypothetical protein | - |
LMF34_RS26250 | 6631..7893 | + | 1263 | WP_248422966.1 | hypothetical protein | - |
LMF34_RS26255 | 7965..8252 | + | 288 | Protein_11 | 3'-phosphatase | - |
LMF34_RS26260 | 8306..8613 | + | 308 | Protein_12 | IS1-like element transposase | - |
LMF34_RS26265 | 8955..9515 | + | 561 | WP_072716685.1 | Major fimbrial subunit SMF-1 | VF |
LMF34_RS26270 | 9564..10268 | + | 705 | WP_072716684.1 | Chaperone protein FimC | VF |
LMF34_RS26275 | 10234..12804 | + | 2571 | WP_248422965.1 | Outer membrane usher protein HtrE | VF |
LMF34_RS26280 | 12801..14132 | + | 1332 | WP_072716682.1 | fimbrial protein | - |
LMF34_RS26285 | 14129..14827 | + | 699 | WP_072716681.1 | molecular chaperone | - |
LMF34_RS26290 | 14985..16406 | + | 1422 | WP_180397351.1 | putative signaling protein | VF |
LMF34_RS26295 | 16409..17326 | + | 918 | WP_072716703.1 | helix-turn-helix domain-containing protein | - |
LMF34_RS26300 | 18088..19068 | + | 981 | WP_072649545.1 | IS5 family transposase ISKpn26 | Transposase |
LMF34_RS26310 | 20842..21189 | + | 348 | WP_072716716.1 | IS66 family transposase ISEc8 | Transposase |
LMF34_RS26315 | 21239..21445 | + | 207 | Protein_23 | IS66 family transposase ISEc8 | Transposase |
LMF34_RS26320 | 21620..22009 | + | 390 | WP_000506730.1 | S24 family peptidase | - |
LMF34_RS26325 | 22082..22303 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
LMF34_RS26330 | 22303..22683 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
LMF34_RS26335 | 22688..22867 | + | 180 | WP_000113018.1 | hypothetical protein | - |
LMF34_RS26340 | 22895..23938 | + | 1044 | WP_248422989.1 | DUF968 domain-containing protein | - |
LMF34_RS26345 | 24027..24479 | + | 453 | WP_097307769.1 | Late promoter-activating protein | - |
LMF34_RS26350 | 24566..25714 | + | 1149 | WP_248422988.1 | terminase | - |
LMF34_RS26355 | 25626..28592 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
LMF34_RS26360 | 28596..29156 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
LMF34_RS26365 | 29466..31043 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
LMF34_RS26370 | 31234..31404 | + | 171 | Protein_34 | terminase | - |
LMF34_RS26375 | 32781..33272 | + | 492 | Protein_35 | phage antirepressor KilAC domain-containing protein | - |
LMF34_RS26380 | 33305..34156 | - | 852 | WP_000611664.1 | phage repressor protein C1 | - |
LMF34_RS26385 | 34267..34476 | - | 210 | WP_000874156.1 | hypothetical protein | - |
LMF34_RS26390 | 34647..35344 | + | 698 | WP_249469380.1 | IS1 family transposase IS1G | Transposase |
LMF34_RS26395 | 35642..38068 | + | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
LMF34_RS26400 | 38082..38708 | + | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
LMF34_RS26405 | 38701..39477 | + | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
LMF34_RS26410 | 39532..40128 | + | 597 | WP_032203482.1 | molecular chaperone | - |
LMF34_RS26415 | 40158..40655 | + | 498 | WP_000019701.1 | 4Fe-4S binding protein | - |
LMF34_RS26420 | 40870..41850 | + | 981 | WP_097479298.1 | IS5 family transposase ISKpn26 | Transposase |
LMF34_RS26425 | 42487..42708 | + | 222 | WP_113411747.1 | creatininase | - |
LMF34_RS26430 | 42716..43747 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
LMF34_RS26435 | 43798..44109 | + | 312 | WP_001224246.1 | hypothetical protein | - |
LMF34_RS26440 | 44357..44917 | + | 561 | WP_015974227.1 | Ref family protein | - |
LMF34_RS26445 | 45107..45748 | + | 642 | WP_024175651.1 | hypothetical protein | - |
LMF34_RS26450 | 45824..48736 | - | 2913 | WP_015974229.1 | type III restriction-modification system endonuclease | - |
LMF34_RS26455 | 48739..50685 | - | 1947 | WP_032190829.1 | site-specific DNA-methyltransferase | - |
LMF34_RS26460 | 50831..51079 | - | 249 | WP_000747846.1 | hypothetical protein | - |
LMF34_RS26465 | 51076..51516 | - | 441 | WP_015974230.1 | hypothetical protein | - |
LMF34_RS26470 | 51550..53367 | - | 1818 | Protein_54 | helicase | - |
LMF34_RS26475 | 53504..54731 | + | 1228 | Protein_55 | IS3 family transposase IS2 | Transposase |
LMF34_RS26480 | 55313..55564 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
LMF34_RS26485 | 55561..55848 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LMF34_RS26490 | 56216..56329 | - | 114 | Protein_58 | alkaline phosphatase | - |
LMF34_RS26495 | 56328..56533 | + | 206 | Protein_59 | hypothetical protein | - |
LMF34_RS26500 | 56708..60262 | - | 3555 | WP_232379268.1 | Outer membrane protein IcsA autotransporter | VF |
LMF34_RS26510 | 61828..62730 | - | 903 | Protein_62 | IS3 family transposase ISSlo2 | Transposase |
LMF34_RS26515 | 62740..63891 | - | 1152 | WP_105075632.1 | IS30 family transposase IS30D | Transposase |
LMF34_RS26520 | 63888..63968 | - | 81 | Protein_64 | hypothetical protein | - |
LMF34_RS26525 | 63956..64862 | + | 907 | Protein_65 | IS3 family transposase ISEc52 | Transposase |
LMF34_RS26530 | 64855..65286 | - | 432 | Protein_66 | IncHI-type conjugal transfer protein TrhH | - |
LMF34_RS26535 | 65276..66322 | - | 1047 | WP_077478202.1 | thioredoxin family protein | - |
LMF34_RS26540 | 67110..67448 | - | 339 | WP_223656872.1 | hypothetical protein | - |
LMF34_RS26545 | 67451..67981 | - | 531 | WP_001352021.1 | hypothetical protein | - |
LMF34_RS26550 | 69006..69491 | + | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
LMF34_RS26555 | 69488..70210 | + | 723 | WP_000133023.1 | hypothetical protein | - |
LMF34_RS26560 | 70221..71852 | + | 1632 | WP_229436851.1 | hypothetical protein | Relaxase |
LMF34_RS26565 | 71846..72543 | - | 698 | Protein_73 | IS1 family transposase | - |
LMF34_RS26570 | 72979..73476 | - | 498 | WP_000148192.1 | hypothetical protein | - |
LMF34_RS26575 | 73653..74350 | + | 698 | WP_223647970.1 | IS1 family transposase IS1X2 | Transposase |
LMF34_RS26580 | 74429..75126 | + | 698 | WP_249469364.1 | IS1 family transposase IS1R | Transposase |
LMF34_RS26585 | 75269..75733 | + | 465 | WP_001352013.1 | helix-turn-helix transcriptional regulator | - |
LMF34_RS26590 | 75903..76781 | + | 879 | WP_225567671.1 | hypothetical protein | - |
LMF34_RS26595 | 76939..77636 | - | 698 | Protein_79 | IS1 family transposase | - |
LMF34_RS26600 | 78033..78855 | - | 823 | Protein_80 | IS3 family transposase | - |
LMF34_RS26605 | 78862..78939 | + | 78 | Protein_81 | hypothetical protein | - |
LMF34_RS26615 | 80253..80624 | - | 372 | Protein_83 | group II intron reverse transcriptase/maturase | - |
LMF34_RS26620 | 81025..81450 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
LMF34_RS26625 | 81450..82721 | + | 1272 | WP_001776125.1 | Y-family DNA polymerase | - |
LMF34_RS26630 | 82860..83015 | + | 156 | WP_001776126.1 | hypothetical protein | - |
LMF34_RS26635 | 83038..84246 | - | 1209 | WP_049239040.1 | IS200-IS605 family transposase IS609 | Transposase |
LMF34_RS26640 | 85470..86441 | - | 972 | WP_001698877.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
LMF34_RS26645 | 86441..87607 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
LMF34_RS26650 | 88348..89358 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
LMF34_RS26655 | 90003..90707 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
LMF34_RS26660 | 91300..92205 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
LMF34_RS26665 | 92202..93440 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
LMF34_RS26670 | 93440..94024 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
LMF34_RS26675 | 94429..95121 | - | 693 | WP_064145616.1 | S24 family peptidase | - |
LMF34_RS26680 | 95229..95447 | + | 219 | WP_042881802.1 | hypothetical protein | - |
LMF34_RS26685 | 95467..95907 | + | 441 | WP_162852153.1 | phage regulatory CII family protein | - |
LMF34_RS26690 | 95879..96643 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
LMF34_RS26695 | 96772..97476 | - | 705 | Protein_99 | IS66 family transposase ISEc23 | Transposase |
LMF34_RS26700 | 97540..97662 | + | 123 | Protein_100 | IS66 family transposase ISEc23 | Transposase |
LMF34_RS26705 | 97754..98535 | - | 782 | Protein_101 | IS21 family transposase IS100kyp | Transposase |
LMF34_RS26710 | 98532..99140 | - | 609 | Protein_102 | IS21 family transposase IS100kyp | Transposase |
LMF34_RS26715 | 99154..99526 | - | 373 | Protein_103 | IS1 family transposase | - |
LMF34_RS26720 | 100036..102369 | + | 2334 | WP_038989470.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
LMF34_RS26725 | 102359..103705 | + | 1347 | WP_158666848.1 | GGDEF domain-containing protein | - |
LMF34_RS26730 | 103752..104448 | - | 697 | Protein_106 | IS1 family transposase IS1G | Transposase |
LMF34_RS26735 | 104529..106634 | + | 2106 | WP_050489276.1 | UDP-forming cellulose synthase catalytic subunit | - |
LMF34_RS26740 | 106698..108848 | + | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
LMF34_RS26745 | 109592..110938 | + | 1347 | Protein_109 | group II intron reverse transcriptase/maturase | - |
LMF34_RS26750 | 111124..111510 | + | 387 | Protein_110 | IS200-IS605 family transposase IS200C | Transposase |
LMF34_RS26755 | 111843..111995 | + | 153 | Protein_111 | endo-1,4-D-glucanase | - |
LMF34_RS26760 | 111977..115450 | + | 3474 | WP_076751476.1 | cellulose synthase complex outer membrane protein BcsC | - |
LMF34_RS26765 | 115641..116339 | - | 699 | Protein_113 | IS3 family transposase IS2 | Transposase |
LMF34_RS26770 | 116458..117192 | + | 735 | WP_113411679.1 | helix-turn-helix domain-containing protein | - |
LMF34_RS26775 | 117301..117998 | + | 698 | WP_227901328.1 | IS1 family transposase IS1R | Transposase |
LMF34_RS26780 | 118014..118562 | + | 549 | Protein_116 | metallophosphoesterase | - |
LMF34_RS26785 | 118559..119260 | + | 702 | WP_113411710.1 | hypothetical protein | - |
LMF34_RS26790 | 119562..120824 | + | 1263 | WP_248422966.1 | hypothetical protein | - |
LMF34_RS26795 | 120896..121183 | + | 288 | Protein_119 | 3'-phosphatase | - |
LMF34_RS26800 | 121237..121544 | + | 308 | Protein_120 | IS1-like element transposase | - |
LMF34_RS26805 | 121886..122446 | + | 561 | WP_072716685.1 | Major fimbrial subunit SMF-1 | VF |
LMF34_RS26810 | 122538..123200 | + | 663 | WP_249469367.1 | putative fimbrial chaperone YadV | VF |
LMF34_RS26815 | 123166..125736 | + | 2571 | WP_248422965.1 | Outer membrane usher protein HtrE | VF |
LMF34_RS26820 | 125733..127064 | + | 1332 | WP_072716682.1 | fimbrial protein | - |
LMF34_RS26825 | 127061..127759 | + | 699 | WP_072716681.1 | molecular chaperone | - |
LMF34_RS26830 | 127917..129338 | + | 1422 | WP_180397351.1 | putative signaling protein | VF |
LMF34_RS26835 | 129341..130225 | + | 885 | WP_249469370.1 | helix-turn-helix domain-containing protein | - |
LMF34_RS26840 | 131022..132002 | + | 981 | Protein_128 | IS5 family transposase ISKpn26 | Transposase |
LMF34_RS26845 | 132252..133455 | - | 1204 | Protein_129 | IS3 family transposase | - |
LMF34_RS26850 | 133849..134142 | + | 294 | Protein_130 | IS66 family insertion sequence element accessory protein TnpB | - |
LMF34_RS26855 | 134192..134400 | + | 209 | Protein_131 | IS66 family transposase | - |
LMF34_RS26860 | 134576..134783 | + | 208 | Protein_132 | DNA repair protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|