NZ_CP0866811..135562

MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 135562 bp
Accession: NZ_CP086681        Location: 1..135562         Organism: Escherichia coli strain EFF60       Replicon: plasmid pMADE-3


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LMF34_RS26205 76..783 + 708 WP_249469384.1 tetratricopeptide repeat protein -
LMF34_RS26210 767..1126 + 360 WP_249469374.1 tetratricopeptide repeat protein -
LMF34_RS26215 1507..2395 + 889 Protein_3 cellulose synthase subunit BcsC-related outer membrane protein -
LMF34_RS26220 2349..2519 + 171 WP_249469377.1 hypothetical protein -
LMF34_RS26225 2710..3408 - 699 Protein_5 IS3 family transposase IS2 Transposase
LMF34_RS26230 3527..4261 + 735 WP_113411679.1 helix-turn-helix domain-containing protein -
LMF34_RS26235 4370..5067 + 698 WP_227901328.1 IS1 family transposase IS1R Transposase
LMF34_RS26240 5083..5631 + 549 Protein_8 metallophosphoesterase -
LMF34_RS26245 5628..6329 + 702 WP_113411710.1 hypothetical protein -
LMF34_RS26250 6631..7893 + 1263 WP_248422966.1 hypothetical protein -
LMF34_RS26255 7965..8252 + 288 Protein_11 3'-phosphatase -
LMF34_RS26260 8306..8613 + 308 Protein_12 IS1-like element transposase -
LMF34_RS26265 8955..9515 + 561 WP_072716685.1 Major fimbrial subunit SMF-1 VF
LMF34_RS26270 9564..10268 + 705 WP_072716684.1 Chaperone protein FimC VF
LMF34_RS26275 10234..12804 + 2571 WP_248422965.1 Outer membrane usher protein HtrE VF
LMF34_RS26280 12801..14132 + 1332 WP_072716682.1 fimbrial protein -
LMF34_RS26285 14129..14827 + 699 WP_072716681.1 molecular chaperone -
LMF34_RS26290 14985..16406 + 1422 WP_180397351.1 putative signaling protein VF
LMF34_RS26295 16409..17326 + 918 WP_072716703.1 helix-turn-helix domain-containing protein -
LMF34_RS26300 18088..19068 + 981 WP_072649545.1 IS5 family transposase ISKpn26 Transposase
LMF34_RS26310 20842..21189 + 348 WP_072716716.1 IS66 family transposase ISEc8 Transposase
LMF34_RS26315 21239..21445 + 207 Protein_23 IS66 family transposase ISEc8 Transposase
LMF34_RS26320 21620..22009 + 390 WP_000506730.1 S24 family peptidase -
LMF34_RS26325 22082..22303 + 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
LMF34_RS26330 22303..22683 + 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
LMF34_RS26335 22688..22867 + 180 WP_000113018.1 hypothetical protein -
LMF34_RS26340 22895..23938 + 1044 WP_248422989.1 DUF968 domain-containing protein -
LMF34_RS26345 24027..24479 + 453 WP_097307769.1 Late promoter-activating protein -
LMF34_RS26350 24566..25714 + 1149 WP_248422988.1 terminase -
LMF34_RS26355 25626..28592 - 2967 WP_001138014.1 Tn3 family transposase TnpA_TnAs1 Transposase
LMF34_RS26360 28596..29156 - 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
LMF34_RS26365 29466..31043 + 1578 WP_001323889.1 Aerotaxis receptor VF
LMF34_RS26370 31234..31404 + 171 Protein_34 terminase -
LMF34_RS26375 32781..33272 + 492 Protein_35 phage antirepressor KilAC domain-containing protein -
LMF34_RS26380 33305..34156 - 852 WP_000611664.1 phage repressor protein C1 -
LMF34_RS26385 34267..34476 - 210 WP_000874156.1 hypothetical protein -
LMF34_RS26390 34647..35344 + 698 WP_249469380.1 IS1 family transposase IS1G Transposase
LMF34_RS26395 35642..38068 + 2427 WP_000661392.1 molybdopterin-dependent oxidoreductase -
LMF34_RS26400 38082..38708 + 627 WP_000816147.1 dimethylsulfoxide reductase subunit B -
LMF34_RS26405 38701..39477 + 777 WP_000544912.1 dimethyl sulfoxide reductase anchor subunit -
LMF34_RS26410 39532..40128 + 597 WP_032203482.1 molecular chaperone -
LMF34_RS26415 40158..40655 + 498 WP_000019701.1 4Fe-4S binding protein -
LMF34_RS26420 40870..41850 + 981 WP_097479298.1 IS5 family transposase ISKpn26 Transposase
LMF34_RS26425 42487..42708 + 222 WP_113411747.1 creatininase -
LMF34_RS26430 42716..43747 + 1032 WP_000067534.1 site-specific integrase -
LMF34_RS26435 43798..44109 + 312 WP_001224246.1 hypothetical protein -
LMF34_RS26440 44357..44917 + 561 WP_015974227.1 Ref family protein -
LMF34_RS26445 45107..45748 + 642 WP_024175651.1 hypothetical protein -
LMF34_RS26450 45824..48736 - 2913 WP_015974229.1 type III restriction-modification system endonuclease -
LMF34_RS26455 48739..50685 - 1947 WP_032190829.1 site-specific DNA-methyltransferase -
LMF34_RS26460 50831..51079 - 249 WP_000747846.1 hypothetical protein -
LMF34_RS26465 51076..51516 - 441 WP_015974230.1 hypothetical protein -
LMF34_RS26470 51550..53367 - 1818 Protein_54 helicase -
LMF34_RS26475 53504..54731 + 1228 Protein_55 IS3 family transposase IS2 Transposase
LMF34_RS26480 55313..55564 + 252 WP_001139206.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
LMF34_RS26485 55561..55848 + 288 WP_000222771.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
LMF34_RS26490 56216..56329 - 114 Protein_58 alkaline phosphatase -
LMF34_RS26495 56328..56533 + 206 Protein_59 hypothetical protein -
LMF34_RS26500 56708..60262 - 3555 WP_232379268.1 Outer membrane protein IcsA autotransporter VF
LMF34_RS26510 61828..62730 - 903 Protein_62 IS3 family transposase ISSlo2 Transposase
LMF34_RS26515 62740..63891 - 1152 WP_105075632.1 IS30 family transposase IS30D Transposase
LMF34_RS26520 63888..63968 - 81 Protein_64 hypothetical protein -
LMF34_RS26525 63956..64862 + 907 Protein_65 IS3 family transposase ISEc52 Transposase
LMF34_RS26530 64855..65286 - 432 Protein_66 IncHI-type conjugal transfer protein TrhH -
LMF34_RS26535 65276..66322 - 1047 WP_077478202.1 thioredoxin family protein -
LMF34_RS26540 67110..67448 - 339 WP_223656872.1 hypothetical protein -
LMF34_RS26545 67451..67981 - 531 WP_001352021.1 hypothetical protein -
LMF34_RS26550 69006..69491 + 486 WP_000071636.1 conjugative transfer protein MobI(A/C) -
LMF34_RS26555 69488..70210 + 723 WP_000133023.1 hypothetical protein -
LMF34_RS26560 70221..71852 + 1632 WP_229436851.1 hypothetical protein Relaxase
LMF34_RS26565 71846..72543 - 698 Protein_73 IS1 family transposase -
LMF34_RS26570 72979..73476 - 498 WP_000148192.1 hypothetical protein -
LMF34_RS26575 73653..74350 + 698 WP_223647970.1 IS1 family transposase IS1X2 Transposase
LMF34_RS26580 74429..75126 + 698 WP_249469364.1 IS1 family transposase IS1R Transposase
LMF34_RS26585 75269..75733 + 465 WP_001352013.1 helix-turn-helix transcriptional regulator -
LMF34_RS26590 75903..76781 + 879 WP_225567671.1 hypothetical protein -
LMF34_RS26595 76939..77636 - 698 Protein_79 IS1 family transposase -
LMF34_RS26600 78033..78855 - 823 Protein_80 IS3 family transposase -
LMF34_RS26605 78862..78939 + 78 Protein_81 hypothetical protein -
LMF34_RS26615 80253..80624 - 372 Protein_83 group II intron reverse transcriptase/maturase -
LMF34_RS26620 81025..81450 + 426 WP_001776124.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
LMF34_RS26625 81450..82721 + 1272 WP_001776125.1 Y-family DNA polymerase -
LMF34_RS26630 82860..83015 + 156 WP_001776126.1 hypothetical protein -
LMF34_RS26635 83038..84246 - 1209 WP_049239040.1 IS200-IS605 family transposase IS609 Transposase
LMF34_RS26640 85470..86441 - 972 WP_001698877.1 ParB/RepB/Spo0J family plasmid partition protein -
LMF34_RS26645 86441..87607 - 1167 WP_000523812.1 Sporulation initiation inhibitor protein Soj VF
LMF34_RS26650 88348..89358 + 1011 WP_000200069.1 RepB family plasmid replication initiator protein -
LMF34_RS26655 90003..90707 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
LMF34_RS26660 91300..92205 + 906 WP_000219391.1 hypothetical protein ARG
LMF34_RS26665 92202..93440 + 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
LMF34_RS26670 93440..94024 + 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
LMF34_RS26675 94429..95121 - 693 WP_064145616.1 S24 family peptidase -
LMF34_RS26680 95229..95447 + 219 WP_042881802.1 hypothetical protein -
LMF34_RS26685 95467..95907 + 441 WP_162852153.1 phage regulatory CII family protein -
LMF34_RS26690 95879..96643 - 765 WP_001389365.1 IS6-like element IS6100 family transposase -
LMF34_RS26695 96772..97476 - 705 Protein_99 IS66 family transposase ISEc23 Transposase
LMF34_RS26700 97540..97662 + 123 Protein_100 IS66 family transposase ISEc23 Transposase
LMF34_RS26705 97754..98535 - 782 Protein_101 IS21 family transposase IS100kyp Transposase
LMF34_RS26710 98532..99140 - 609 Protein_102 IS21 family transposase IS100kyp Transposase
LMF34_RS26715 99154..99526 - 373 Protein_103 IS1 family transposase -
LMF34_RS26720 100036..102369 + 2334 WP_038989470.1 putative cyclic di-GMP phosphodiesterase PdeI VF
LMF34_RS26725 102359..103705 + 1347 WP_158666848.1 GGDEF domain-containing protein -
LMF34_RS26730 103752..104448 - 697 Protein_106 IS1 family transposase IS1G Transposase
LMF34_RS26735 104529..106634 + 2106 WP_050489276.1 UDP-forming cellulose synthase catalytic subunit -
LMF34_RS26740 106698..108848 + 2151 WP_001351999.1 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB -
LMF34_RS26745 109592..110938 + 1347 Protein_109 group II intron reverse transcriptase/maturase -
LMF34_RS26750 111124..111510 + 387 Protein_110 IS200-IS605 family transposase IS200C Transposase
LMF34_RS26755 111843..111995 + 153 Protein_111 endo-1,4-D-glucanase -
LMF34_RS26760 111977..115450 + 3474 WP_076751476.1 cellulose synthase complex outer membrane protein BcsC -
LMF34_RS26765 115641..116339 - 699 Protein_113 IS3 family transposase IS2 Transposase
LMF34_RS26770 116458..117192 + 735 WP_113411679.1 helix-turn-helix domain-containing protein -
LMF34_RS26775 117301..117998 + 698 WP_227901328.1 IS1 family transposase IS1R Transposase
LMF34_RS26780 118014..118562 + 549 Protein_116 metallophosphoesterase -
LMF34_RS26785 118559..119260 + 702 WP_113411710.1 hypothetical protein -
LMF34_RS26790 119562..120824 + 1263 WP_248422966.1 hypothetical protein -
LMF34_RS26795 120896..121183 + 288 Protein_119 3'-phosphatase -
LMF34_RS26800 121237..121544 + 308 Protein_120 IS1-like element transposase -
LMF34_RS26805 121886..122446 + 561 WP_072716685.1 Major fimbrial subunit SMF-1 VF
LMF34_RS26810 122538..123200 + 663 WP_249469367.1 putative fimbrial chaperone YadV VF
LMF34_RS26815 123166..125736 + 2571 WP_248422965.1 Outer membrane usher protein HtrE VF
LMF34_RS26820 125733..127064 + 1332 WP_072716682.1 fimbrial protein -
LMF34_RS26825 127061..127759 + 699 WP_072716681.1 molecular chaperone -
LMF34_RS26830 127917..129338 + 1422 WP_180397351.1 putative signaling protein VF
LMF34_RS26835 129341..130225 + 885 WP_249469370.1 helix-turn-helix domain-containing protein -
LMF34_RS26840 131022..132002 + 981 Protein_128 IS5 family transposase ISKpn26 Transposase
LMF34_RS26845 132252..133455 - 1204 Protein_129 IS3 family transposase -
LMF34_RS26850 133849..134142 + 294 Protein_130 IS66 family insertion sequence element accessory protein TnpB -
LMF34_RS26855 134192..134400 + 209 Protein_131 IS66 family transposase -
LMF34_RS26860 134576..134783 + 208 Protein_132 DNA repair protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance